RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 ORMDL2Q53FV1 153 aa12.05□□□□□ -0.48
HIF3A-203ENST00000291300 STPG4Q8N801 248 aa12.05□□□□□ -0.48
HIF3A-203ENST00000291300 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
HIF3A-203ENST00000291300 FBN1P35555 2871 aaKnown RBP12.05□□□□□ -0.48
HIF3A-203ENST00000291300 ANKRD39Q53RE8 183 aa12.05□□□□□ -0.48
HIF3A-203ENST00000291300 C2orf66Q6UXQ4 117 aa12.05□□□□□ -0.48
HIF3A-203ENST00000291300 ZFP2Q6ZN57 461 aa12.05□□□□□ -0.48
HIF3A-203ENST00000291300 SNHG12Q9BXW3 62 aa12.05□□□□□ -0.48
HIF3A-203ENST00000291300 TRBV27A0A0K0K1C4 114 aa12.04□□□□□ -0.48
HIF3A-203ENST00000291300 RPL39P62891 51 aaKnown RBP12.04□□□□□ -0.48
HIF3A-203ENST00000291300 RPL32P62910 135 aaKnown RBP12.04□□□□□ -0.48
HIF3A-203ENST00000291300 CTAG1AP78358 180 aa12.04□□□□□ -0.48
HIF3A-203ENST00000291300 UQCR10Q9UDW1 63 aa12.04□□□□□ -0.48
HIF3A-203ENST00000291300 A8MWV9 139 aa12.04□□□□□ -0.48
HIF3A-203ENST00000291300 PTH2Q96A98 100 aa12.04□□□□□ -0.48
HIF3A-203ENST00000291300 SPXQ9BT56 116 aa12.04□□□□□ -0.48
HIF3A-203ENST00000291300 PLAC8L1A1L4L8 177 aa12.03□□□□□ -0.48
HIF3A-203ENST00000291300 VCYO14598 125 aa12.03□□□□□ -0.48
HIF3A-203ENST00000291300 Q6ZN92 141 aa12.03□□□□□ -0.48
HIF3A-203ENST00000291300 Q6ZTI0 123 aa12.03□□□□□ -0.48
HIF3A-203ENST00000291300 TRGV1A0A0A0MS02 117 aa12.02□□□□□ -0.48
HIF3A-203ENST00000291300 KRTAP24-1Q3LI83 254 aa12.02□□□□□ -0.48
HIF3A-203ENST00000291300 SCGB3A1Q96QR1 104 aa12.02□□□□□ -0.48
HIF3A-203ENST00000291300 ATP5LO75964 103 aa12.02□□□□□ -0.49
HIF3A-203ENST00000291300 C9orf66Q5T8R8 295 aa12.02□□□□□ -0.49
HIF3A-203ENST00000291300 RS1O15537 224 aa12.01□□□□□ -0.49
HIF3A-203ENST00000291300 TSHBP01222 138 aa12.01□□□□□ -0.49
HIF3A-203ENST00000291300 ZC2HC1BQ5TFG8 222 aa12.01□□□□□ -0.49
HIF3A-203ENST00000291300 ZMAT4Q9H898 229 aa12.01□□□□□ -0.49
HIF3A-203ENST00000291300 MRPL35Q9NZE8 188 aaKnown RBP12.01□□□□□ -0.49
HIF3A-203ENST00000291300 HSBP1L1C9JCN9 74 aa12.01□□□□□ -0.49
HIF3A-203ENST00000291300 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.01□□□□□ -0.49
HIF3A-203ENST00000291300 K7EMI3 77 aa12.01□□□□□ -0.49
HIF3A-203ENST00000291300 PIK3CD-AS1Q5SR53 167 aa12.01□□□□□ -0.49
HIF3A-203ENST00000291300 TMEM263Q8WUH6 116 aaKnown RBP12.01□□□□□ -0.49
HIF3A-203ENST00000291300 NOP10Q9NPE3 64 aaKnown RBP12.01□□□□□ -0.49
HIF3A-203ENST00000291300 TP53TG1Q9Y2A0 90 aa12.01□□□□□ -0.49
HIF3A-203ENST00000291300 IGHV3-53P01767 116 aa12□□□□□ -0.49
HIF3A-203ENST00000291300 ZNF479Q96JC4 524 aa12□□□□□ -0.49
HIF3A-203ENST00000291300 NBEAL2Q6ZNJ1 2754 aa12□□□□□ -0.49
HIF3A-203ENST00000291300 KIR2DL4Q99706 377 aa11.99□□□□□ -0.49
HIF3A-203ENST00000291300 HHLA3Q9XRX5 114 aa11.99□□□□□ -0.49
HIF3A-203ENST00000291300 INSL3P51460 131 aa11.99□□□□□ -0.49
HIF3A-203ENST00000291300 HNRNPA3P51991 378 aaKnown RBP11.99□□□□□ -0.49
HIF3A-203ENST00000291300 GTSCR1Q86UQ5 136 aa11.99□□□□□ -0.49
HIF3A-203ENST00000291300 BAALCQ8WXS3 180 aa11.99□□□□□ -0.49
HIF3A-203ENST00000291300 EDA2RQ9HAV5 297 aa11.99□□□□□ -0.49
HIF3A-203ENST00000291300 NEXN-AS1Q8NBZ9 246 aa11.98□□□□□ -0.49
HIF3A-203ENST00000291300 A0A087WX48 190 aa11.98□□□□□ -0.49
HIF3A-203ENST00000291300 IGIPA6NJ69 53 aa11.98□□□□□ -0.49
HIF3A-203ENST00000291300 RIPPLY3P57055 190 aa11.97□□□□□ -0.49
HIF3A-203ENST00000291300 ERASQ7Z444 233 aa11.97□□□□□ -0.49
HIF3A-203ENST00000291300 OPRPNQ99935 248 aaPredicted RBP11.97□□□□□ -0.49
HIF3A-203ENST00000291300 CYSLTR1Q9Y271 337 aa11.97□□□□□ -0.49
HIF3A-203ENST00000291300 IGKV2D-26A0A0A0MRZ7 120 aa11.96□□□□□ -0.49
HIF3A-203ENST00000291300 I3L3M4 83 aa11.96□□□□□ -0.49
HIF3A-203ENST00000291300 IGKCP01834 107 aa11.96□□□□□ -0.49
HIF3A-203ENST00000291300 C1QTNF4Q9BXJ3 329 aa11.96□□□□□ -0.49
HIF3A-203ENST00000291300 STAB1Q9NY15 2570 aa11.96□□□□□ -0.49
HIF3A-203ENST00000291300 H7C1H1 209 aa11.96□□□□□ -0.5
HIF3A-203ENST00000291300 M0R143 59 aa11.96□□□□□ -0.5
HIF3A-203ENST00000291300 FGF6P10767 208 aa11.96□□□□□ -0.5
HIF3A-203ENST00000291300 OR4C5Q8NGB2 326 aa11.96□□□□□ -0.5
HIF3A-203ENST00000291300 IGHV3-38A0A0C4DH36 116 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 BATFQ16520 125 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 WFDC9Q8NEX5 89 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 C16orf74Q96GX8 76 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 PRSS29PA6NIE9 313 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 RHODO00212 210 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 DPM2O94777 84 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 COX8AP10176 69 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 EMP1P54849 157 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 RRN3P1Q2M238 152 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 SLC25A34Q6PIV7 304 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 PRIMA1Q86XR5 153 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 PCP2Q8IVA1 136 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 PHLDA1Q8WV24 401 aaPredicted RBP11.95□□□□□ -0.5
HIF3A-203ENST00000291300 TTTY13Q9BZ97 58 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 TNFRSF18Q9Y5U5 241 aa11.95□□□□□ -0.5
HIF3A-203ENST00000291300 GAGE12BA1L429 117 aa11.94□□□□□ -0.5
HIF3A-203ENST00000291300 GAGE7O76087 117 aa11.94□□□□□ -0.5
HIF3A-203ENST00000291300 GAGE12FP0CL80 117 aa11.94□□□□□ -0.5
HIF3A-203ENST00000291300 GAGE12GP0CL81 117 aa11.94□□□□□ -0.5
HIF3A-203ENST00000291300 GAGE12IP0CL82 117 aa11.94□□□□□ -0.5
HIF3A-203ENST00000291300 DAZ2Q13117 558 aaKnown RBP11.94□□□□□ -0.5
HIF3A-203ENST00000291300 CMYA5Q8N3K9 4069 aa11.94□□□□□ -0.5
HIF3A-203ENST00000291300 TRAV12-1A0A0B4J245 112 aa11.93□□□□□ -0.5
HIF3A-203ENST00000291300 A0A1B0GV90 55 aa11.93□□□□□ -0.5
HIF3A-203ENST00000291300 C20orf203Q8NBC4 194 aa11.93□□□□□ -0.5
HIF3A-203ENST00000291300 C2orf88Q9BSF0 95 aa11.93□□□□□ -0.5
HIF3A-203ENST00000291300 CHTOPQ9Y3Y2 248 aaKnown RBP11.93□□□□□ -0.5
HIF3A-203ENST00000291300 F8VRH5 84 aa11.92□□□□□ -0.5
HIF3A-203ENST00000291300 NMUP48645 174 aa11.92□□□□□ -0.5
HIF3A-203ENST00000291300 RHOHQ15669 191 aa11.92□□□□□ -0.5
HIF3A-203ENST00000291300 C2orf91Q6ZV80 131 aa11.92□□□□□ -0.5
HIF3A-203ENST00000291300 MRPS16Q9Y3D3 137 aaKnown RBP11.92□□□□□ -0.5
HIF3A-203ENST00000291300 HINT1P49773 126 aaPredicted RBP11.92□□□□□ -0.5
HIF3A-203ENST00000291300 TRAV4A0A0B4J268 109 aa11.91□□□□□ -0.5
HIF3A-203ENST00000291300 CEMP1Q6PRD7 247 aaPredicted RBP11.91□□□□□ -0.5
HIF3A-203ENST00000291300 FAM104AQ969W3 186 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms