RNA–Protein interactions for RNA: ENST00000285199.11

USP43-201, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP43, Length 4,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-201ENST00000285199 FAM231CP0DMU5 169 aa11.98□□□□□ -0.49
USP43-201ENST00000285199 HHLA3Q9XRX5 114 aa11.98□□□□□ -0.49
USP43-201ENST00000285199 IGHV7-4-1A0A0J9YVY3 117 aa11.98□□□□□ -0.49
USP43-201ENST00000285199 NXPH4O95158 308 aa11.98□□□□□ -0.49
USP43-201ENST00000285199 GNLYP22749 145 aa11.98□□□□□ -0.49
USP43-201ENST00000285199 RPL36AP83881 106 aaKnown RBP11.98□□□□□ -0.49
USP43-201ENST00000285199 RPL36ALQ969Q0 106 aaKnown RBP11.98□□□□□ -0.49
USP43-201ENST00000285199 IGHV1-69DA0A0B4J2H0 117 aa11.97□□□□□ -0.49
USP43-201ENST00000285199 IGHV1-69P01742 117 aa11.97□□□□□ -0.49
USP43-201ENST00000285199 Q8N1Y9 231 aa11.97□□□□□ -0.49
USP43-201ENST00000285199 Q9H8V8 135 aa11.97□□□□□ -0.49
USP43-201ENST00000285199 TCTEX1D4Q5JR98 221 aa11.97□□□□□ -0.49
USP43-201ENST00000285199 CCDC140Q96MF4 163 aa11.97□□□□□ -0.49
USP43-201ENST00000285199 CITED1Q99966 193 aa11.97□□□□□ -0.49
USP43-201ENST00000285199 CRYGBP07316 175 aa11.96□□□□□ -0.5
USP43-201ENST00000285199 ACANP16112 2415 aa11.96□□□□□ -0.5
USP43-201ENST00000285199 IGHV4-38-2P0DP08 117 aa11.96□□□□□ -0.5
USP43-201ENST00000285199 XGP55808 180 aa11.96□□□□□ -0.5
USP43-201ENST00000285199 ZNF415Q09FC8 603 aa11.96□□□□□ -0.5
USP43-201ENST00000285199 C6orf226Q5I0X4 101 aa11.96□□□□□ -0.5
USP43-201ENST00000285199 TRBV6-1A0A0K0K1D8 114 aa11.95□□□□□ -0.5
USP43-201ENST00000285199 Q6ZS46 218 aa11.95□□□□□ -0.5
USP43-201ENST00000285199 TRAV12-1A0A0B4J245 112 aa11.95□□□□□ -0.5
USP43-201ENST00000285199 A8MZ25 164 aa11.95□□□□□ -0.5
USP43-201ENST00000285199 DEFB130BP0DP73 79 aa11.95□□□□□ -0.5
USP43-201ENST00000285199 DEFB130AP0DP74 79 aa11.95□□□□□ -0.5
USP43-201ENST00000285199 LEPROTO15243 131 aa11.94□□□□□ -0.5
USP43-201ENST00000285199 MRPL23Q16540 153 aaKnown RBP11.94□□□□□ -0.5
USP43-201ENST00000285199 RBMY1BA6NDE4 496 aaKnown RBP11.94□□□□□ -0.5
USP43-201ENST00000285199 RBMY1EA6NEQ0 496 aaKnown RBP11.94□□□□□ -0.5
USP43-201ENST00000285199 RBMY1DP0C7P1 496 aaKnown RBP11.94□□□□□ -0.5
USP43-201ENST00000285199 RBMY1A1P0DJD3 496 aaKnown RBP11.94□□□□□ -0.5
USP43-201ENST00000285199 RBMY1CP0DJD4 496 aa11.94□□□□□ -0.5
USP43-201ENST00000285199 C9orf47Q6ZRZ4 202 aa11.94□□□□□ -0.5
USP43-201ENST00000285199 PIP4P1Q86T03 277 aa11.94□□□□□ -0.5
USP43-201ENST00000285199 FAM236AA0A1B0GUQ0 79 aa11.93□□□□□ -0.5
USP43-201ENST00000285199 FAM236BA0A1B0GV22 79 aa11.93□□□□□ -0.5
USP43-201ENST00000285199 PRB1P04280 392 aa11.93□□□□□ -0.5
USP43-201ENST00000285199 PRR9Q5T870 116 aa11.93□□□□□ -0.5
USP43-201ENST00000285199 C16orf54Q6UWD8 224 aa11.93□□□□□ -0.5
USP43-201ENST00000285199 C20orf173Q96LM9 149 aa11.93□□□□□ -0.5
USP43-201ENST00000285199 U3KQK5 164 aa11.93□□□□□ -0.5
USP43-201ENST00000285199 FSTL3O95633 263 aa11.92□□□□□ -0.5
USP43-201ENST00000285199 APRG1Q8IVJ8 170 aa11.92□□□□□ -0.5
USP43-201ENST00000285199 NEXN-AS1Q8NBZ9 246 aa11.92□□□□□ -0.5
USP43-201ENST00000285199 A0A0J9YY99 117 aa11.92□□□□□ -0.5
USP43-201ENST00000285199 CFAP47Q6ZTR5 3102 aa11.92□□□□□ -0.5
USP43-201ENST00000285199 CLPSL2Q6UWE3 100 aa11.92□□□□□ -0.5
USP43-201ENST00000285199 IGHV4-59P01825 116 aa11.91□□□□□ -0.5
USP43-201ENST00000285199 ICOSQ9Y6W8 199 aa11.91□□□□□ -0.5
USP43-201ENST00000285199 A0A096LPF7 62 aa11.91□□□□□ -0.5
USP43-201ENST00000285199 PRM2P04554 102 aa11.91□□□□□ -0.5
USP43-201ENST00000285199 BOD1L1Q8NFC6 3051 aa11.91□□□□□ -0.5
USP43-201ENST00000285199 BAALC-AS2P0C853 105 aa11.91□□□□□ -0.5
USP43-201ENST00000285199 NRACQ8N912 160 aa11.91□□□□□ -0.5
USP43-201ENST00000285199 HIST2H2BDQ6DRA6 164 aa11.9□□□□□ -0.5
USP43-201ENST00000285199 PEMTQ9UBM1 199 aa11.9□□□□□ -0.5
USP43-201ENST00000285199 IGKV3D-7A0A0C4DH55 119 aa11.9□□□□□ -0.5
USP43-201ENST00000285199 MRPL53Q96EL3 112 aaKnown RBP11.9□□□□□ -0.5
USP43-201ENST00000285199 K7ENP7 123 aa11.9□□□□□ -0.5
USP43-201ENST00000285199 IGHV3-30-3P0DP02 117 aa11.9□□□□□ -0.5
USP43-201ENST00000285199 LENEPQ9Y5L5 61 aa11.89□□□□□ -0.51
USP43-201ENST00000285199 IGHV4-61A0A0C4DH41 118 aa11.89□□□□□ -0.51
USP43-201ENST00000285199 COX6B1P14854 86 aa11.89□□□□□ -0.51
USP43-201ENST00000285199 MALP21145 153 aa11.89□□□□□ -0.51
USP43-201ENST00000285199 CFAP161Q6P656 301 aa11.89□□□□□ -0.51
USP43-201ENST00000285199 Q8NA96 180 aa11.89□□□□□ -0.51
USP43-201ENST00000285199 B4DSR2 109 aa11.89□□□□□ -0.51
USP43-201ENST00000285199 HERV-K104P63124 156 aa11.89□□□□□ -0.51
USP43-201ENST00000285199 NRGNQ92686 78 aa11.89□□□□□ -0.51
USP43-201ENST00000285199 LAMTOR3Q9UHA4 124 aa11.89□□□□□ -0.51
USP43-201ENST00000285199 RHODO00212 210 aa11.88□□□□□ -0.51
USP43-201ENST00000285199 C5orf56Q8N8D9 126 aa11.88□□□□□ -0.51
USP43-201ENST00000285199 MSMBP08118 114 aa11.88□□□□□ -0.51
USP43-201ENST00000285199 ADAMTS20P59510 1910 aa11.88□□□□□ -0.51
USP43-201ENST00000285199 TRAV4A0A0B4J268 109 aa11.88□□□□□ -0.51
USP43-201ENST00000285199 TMEM86BQ8N661 226 aa11.88□□□□□ -0.51
USP43-201ENST00000285199 S100A7L2Q5SY68 101 aa11.87□□□□□ -0.51
USP43-201ENST00000285199 Q9HAA7 133 aa11.87□□□□□ -0.51
USP43-201ENST00000285199 PROK1P58294 105 aa11.87□□□□□ -0.51
USP43-201ENST00000285199 CFAP126Q5VTH2 177 aa11.87□□□□□ -0.51
USP43-201ENST00000285199 C5orf38Q86SI9 138 aa11.86□□□□□ -0.51
USP43-201ENST00000285199 INSP01308 110 aa11.86□□□□□ -0.51
USP43-201ENST00000285199 U3KQE9 123 aa11.86□□□□□ -0.51
USP43-201ENST00000285199 ZFAND2AQ8N6M9 145 aa11.86□□□□□ -0.51
USP43-201ENST00000285199 ZFAND3Q9H8U3 227 aa11.86□□□□□ -0.51
USP43-201ENST00000285199 TRBV7-3A0A075B6L6 115 aa11.86□□□□□ -0.51
USP43-201ENST00000285199 CRIP2P52943 208 aaPredicted RBP11.86□□□□□ -0.51
USP43-201ENST00000285199 NDUFV3P56181 108 aaKnown RBP11.86□□□□□ -0.51
USP43-201ENST00000285199 SLC25A29Q8N8R3 303 aa11.85□□□□□ -0.51
USP43-201ENST00000285199 RNF223E7ERA6 249 aa11.85□□□□□ -0.51
USP43-201ENST00000285199 NSUN5P1Q3KNT7 163 aa11.85□□□□□ -0.51
USP43-201ENST00000285199 C20orf203Q8NBC4 194 aa11.85□□□□□ -0.51
USP43-201ENST00000285199 RHOHQ15669 191 aa11.84□□□□□ -0.51
USP43-201ENST00000285199 TRBV10-2A0A0K0K1G8 114 aa11.84□□□□□ -0.51
USP43-201ENST00000285199 LGALS9O00182 355 aa11.84□□□□□ -0.51
USP43-201ENST00000285199 TIMM17AQ99595 171 aa11.84□□□□□ -0.51
USP43-201ENST00000285199 A0A0J9YXY3 114 aa11.84□□□□□ -0.51
USP43-201ENST00000285199 SLURP1P55000 103 aa11.84□□□□□ -0.51
USP43-201ENST00000285199 DEFB112Q30KQ8 113 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms