RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 RAB5BP61020 215 aa14.51□□□□□ -0.09
RTCA-201ENST00000260563 HIST1H2BKO60814 126 aa14.51□□□□□ -0.09
RTCA-201ENST00000260563 HIST1H2BJP06899 126 aa14.51□□□□□ -0.09
RTCA-201ENST00000260563 HIST1H2BOP23527 126 aa14.51□□□□□ -0.09
RTCA-201ENST00000260563 HIST1H2BBP33778 126 aa14.51□□□□□ -0.09
RTCA-201ENST00000260563 HIST1H2BDP58876 126 aa14.51□□□□□ -0.09
RTCA-201ENST00000260563 HIST1H2BCP62807 126 aa14.51□□□□□ -0.09
RTCA-201ENST00000260563 HIST2H2BEQ16778 126 aa14.51□□□□□ -0.09
RTCA-201ENST00000260563 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.51□□□□□ -0.09
RTCA-201ENST00000260563 NRACQ8N912 160 aa14.51□□□□□ -0.09
RTCA-201ENST00000260563 HIST1H2BHQ93079 126 aa14.51□□□□□ -0.09
RTCA-201ENST00000260563 RPL39LQ96EH5 51 aaKnown RBP14.51□□□□□ -0.09
RTCA-201ENST00000260563 HIST1H2BNQ99877 126 aa14.51□□□□□ -0.09
RTCA-201ENST00000260563 HIST1H2BMQ99879 126 aa14.51□□□□□ -0.09
RTCA-201ENST00000260563 LAMTOR2Q9Y2Q5 125 aa14.51□□□□□ -0.09
RTCA-201ENST00000260563 TRAV26-1A0A087WT03 109 aa14.5□□□□□ -0.09
RTCA-201ENST00000260563 TNFRSF6BO95407 300 aa14.5□□□□□ -0.09
RTCA-201ENST00000260563 NPYP01303 97 aa14.5□□□□□ -0.09
RTCA-201ENST00000260563 K7EQD1 137 aa14.49□□□□□ -0.09
RTCA-201ENST00000260563 PPP1R17O96001 155 aa14.49□□□□□ -0.09
RTCA-201ENST00000260563 OR10J3Q5JRS4 329 aa14.49□□□□□ -0.09
RTCA-201ENST00000260563 SLC25A29Q8N8R3 303 aa14.49□□□□□ -0.09
RTCA-201ENST00000260563 PRO0255Q9UI72 69 aa14.49□□□□□ -0.09
RTCA-201ENST00000260563 A0A0J9YY99 117 aa14.48□□□□□ -0.09
RTCA-201ENST00000260563 TRBV6-4A0A1B0GX49 114 aa14.48□□□□□ -0.09
RTCA-201ENST00000260563 NIT2Q9NQR4 276 aa14.48□□□□□ -0.09
RTCA-201ENST00000260563 HHLA3Q9XRX5 114 aa14.48□□□□□ -0.09
RTCA-201ENST00000260563 P0DMU3 169 aa14.47□□□□□ -0.09
RTCA-201ENST00000260563 FAM231AP0DMU4 169 aa14.47□□□□□ -0.09
RTCA-201ENST00000260563 FAM231CP0DMU5 169 aa14.47□□□□□ -0.09
RTCA-201ENST00000260563 TCTAP57738 103 aa14.47□□□□□ -0.09
RTCA-201ENST00000260563 C18orf32Q8TCD1 76 aa14.47□□□□□ -0.09
RTCA-201ENST00000260563 CRYBA4P53673 196 aa14.46□□□□□ -0.09
RTCA-201ENST00000260563 C15orf53Q8NAA6 179 aa14.46□□□□□ -0.09
RTCA-201ENST00000260563 TRBV10-1A0A0K0K1A3 114 aa14.46□□□□□ -0.1
RTCA-201ENST00000260563 PAX4O43316 350 aa14.46□□□□□ -0.1
RTCA-201ENST00000260563 RHOHQ15669 191 aa14.46□□□□□ -0.1
RTCA-201ENST00000260563 IQCJQ1A5X6 159 aa14.46□□□□□ -0.1
RTCA-201ENST00000260563 C20orf78Q9BR46 151 aa14.46□□□□□ -0.1
RTCA-201ENST00000260563 MAP1LC3AQ9H492 121 aa14.46□□□□□ -0.1
RTCA-201ENST00000260563 TMA7Q9Y2S6 64 aaKnown RBP14.46□□□□□ -0.1
RTCA-201ENST00000260563 TRBV6-5A0A0K0K1A5 114 aa14.45□□□□□ -0.1
RTCA-201ENST00000260563 H3BNG1 76 aa14.45□□□□□ -0.1
RTCA-201ENST00000260563 SUMO2P61956 95 aaKnown RBP14.45□□□□□ -0.1
RTCA-201ENST00000260563 Q0VG73 95 aa14.45□□□□□ -0.1
RTCA-201ENST00000260563 NEXN-AS1Q8NBZ9 246 aa14.45□□□□□ -0.1
RTCA-201ENST00000260563 VSIG2Q96IQ7 327 aa14.45□□□□□ -0.1
RTCA-201ENST00000260563 ST20Q9HBF5 79 aa14.45□□□□□ -0.1
RTCA-201ENST00000260563 Q9UF83 564 aa14.45□□□□□ -0.1
RTCA-201ENST00000260563 LOC389332A0A1B0GUA5 103 aa14.44□□□□□ -0.1
RTCA-201ENST00000260563 DNAJC30Q96LL9 226 aa14.44□□□□□ -0.1
RTCA-201ENST00000260563 PRADC1Q9BSG0 188 aa14.44□□□□□ -0.1
RTCA-201ENST00000260563 APLNQ9ULZ1 77 aa14.44□□□□□ -0.1
RTCA-201ENST00000260563 TENM2Q9NT68 2774 aa14.44□□□□□ -0.1
RTCA-201ENST00000260563 PRSS47A8MTI9 375 aa14.43□□□□□ -0.1
RTCA-201ENST00000260563 NUDT3O95989 172 aa14.43□□□□□ -0.1
RTCA-201ENST00000260563 LYSTQ99698 3801 aa14.43□□□□□ -0.1
RTCA-201ENST00000260563 TNFRSF18Q9Y5U5 241 aa14.43□□□□□ -0.1
RTCA-201ENST00000260563 BAGE3Q86Y29 109 aa14.42□□□□□ -0.1
RTCA-201ENST00000260563 SDHAF1A6NFY7 115 aa14.41□□□□□ -0.1
RTCA-201ENST00000260563 GYPEP15421 78 aa14.41□□□□□ -0.1
RTCA-201ENST00000260563 IFI27P40305 119 aaPredicted RBP14.41□□□□□ -0.1
RTCA-201ENST00000260563 NDUFA6P56556 154 aa14.41□□□□□ -0.1
RTCA-201ENST00000260563 RPL36AP83881 106 aaKnown RBP14.41□□□□□ -0.1
RTCA-201ENST00000260563 ZNRF2Q8NHG8 242 aa14.41□□□□□ -0.1
RTCA-201ENST00000260563 PRSS3P2Q8NHM4 247 aa14.41□□□□□ -0.1
RTCA-201ENST00000260563 RPL36ALQ969Q0 106 aaKnown RBP14.41□□□□□ -0.1
RTCA-201ENST00000260563 TMEM70Q9BUB7 260 aa14.41□□□□□ -0.1
RTCA-201ENST00000260563 ICOSQ9Y6W8 199 aa14.41□□□□□ -0.1
RTCA-201ENST00000260563 TRBV7-3A0A075B6L6 115 aa14.4□□□□□ -0.1
RTCA-201ENST00000260563 LOC100131303A0A0U1RQF7 123 aa14.4□□□□□ -0.1
RTCA-201ENST00000260563 GAGE12JA6NER3 117 aa14.4□□□□□ -0.1
RTCA-201ENST00000260563 POLR2KP53803 58 aaKnown RBP14.4□□□□□ -0.1
RTCA-201ENST00000260563 RPL32P62910 135 aaKnown RBP14.4□□□□□ -0.1
RTCA-201ENST00000260563 GAGE1Q13065 139 aa14.4□□□□□ -0.1
RTCA-201ENST00000260563 GAGE4Q13068 117 aa14.4□□□□□ -0.1
RTCA-201ENST00000260563 GAGE5Q13069 117 aa14.4□□□□□ -0.1
RTCA-201ENST00000260563 GAGE13Q4V321 117 aa14.4□□□□□ -0.1
RTCA-201ENST00000260563 SMIM2Q9BVW6 85 aa14.4□□□□□ -0.1
RTCA-201ENST00000260563 PMCHP20382 165 aa14.39□□□□□ -0.11
RTCA-201ENST00000260563 NXT2Q9NPJ8 142 aaKnown RBP14.39□□□□□ -0.11
RTCA-201ENST00000260563 IGLV2-18A0A075B6J9 118 aa14.38□□□□□ -0.11
RTCA-201ENST00000260563 S100A6P06703 90 aa14.38□□□□□ -0.11
RTCA-201ENST00000260563 NIT1Q86X76 327 aa14.38□□□□□ -0.11
RTCA-201ENST00000260563 Q8N8P6 123 aa14.38□□□□□ -0.11
RTCA-201ENST00000260563 A0A096LPF7 62 aa14.37□□□□□ -0.11
RTCA-201ENST00000260563 VCYO14598 125 aa14.37□□□□□ -0.11
RTCA-201ENST00000260563 LINC00614P0C842 121 aa14.37□□□□□ -0.11
RTCA-201ENST00000260563 MRPL23Q16540 153 aaKnown RBP14.37□□□□□ -0.11
RTCA-201ENST00000260563 COA6Q5JTJ3 125 aaKnown RBP14.37□□□□□ -0.11
RTCA-201ENST00000260563 URB1-AS1Q96HZ7 61 aa14.37□□□□□ -0.11
RTCA-201ENST00000260563 TRBV27A0A0K0K1C4 114 aa14.36□□□□□ -0.11
RTCA-201ENST00000260563 SERF1AO75920 110 aa14.36□□□□□ -0.11
RTCA-201ENST00000260563 UBE2D3P61077 147 aa14.36□□□□□ -0.11
RTCA-201ENST00000260563 UBE2D2P62837 147 aa14.36□□□□□ -0.11
RTCA-201ENST00000260563 RNASEKQ6P5S7 137 aaKnown RBP14.36□□□□□ -0.11
RTCA-201ENST00000260563 FA2HQ7L5A8 372 aa14.36□□□□□ -0.11
RTCA-201ENST00000260563 NEGR1Q7Z3B1 354 aa14.36□□□□□ -0.11
RTCA-201ENST00000260563 I3L3M4 83 aa14.36□□□□□ -0.11
RTCA-201ENST00000260563 LINC00694P0DN24 101 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms