RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 IQCJQ1A5X6 159 aa11.11□□□□□ -0.63
CCDC90B-201ENST00000260054 AMN1Q8IY45 258 aa11.11□□□□□ -0.63
CCDC90B-201ENST00000260054 ZNF664Q8N3J9 261 aa11.11□□□□□ -0.63
CCDC90B-201ENST00000260054 TRAV10A0A0B4J240 114 aa11.11□□□□□ -0.63
CCDC90B-201ENST00000260054 GATA1P15976 413 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-201ENST00000260054 ZNF56Q15929 161 aa11.11□□□□□ -0.63
CCDC90B-201ENST00000260054 RASL11AQ6T310 242 aa11.11□□□□□ -0.63
CCDC90B-201ENST00000260054 RNF185Q96GF1 192 aa11.11□□□□□ -0.63
CCDC90B-201ENST00000260054 PHLDA1Q8WV24 401 aaPredicted RBP11.1□□□□□ -0.63
CCDC90B-201ENST00000260054 F5H697 171 aa11.09□□□□□ -0.63
CCDC90B-201ENST00000260054 RAB4AP20338 218 aa11.09□□□□□ -0.63
CCDC90B-201ENST00000260054 TMEM136Q6ZRR5 245 aa11.09□□□□□ -0.63
CCDC90B-201ENST00000260054 HHLA3Q9XRX5 114 aa11.09□□□□□ -0.63
CCDC90B-201ENST00000260054 CRYBA4P53673 196 aa11.08□□□□□ -0.64
CCDC90B-201ENST00000260054 FAM104BQ5XKR9 115 aa11.08□□□□□ -0.64
CCDC90B-201ENST00000260054 SUMO4Q6EEV6 95 aa11.08□□□□□ -0.64
CCDC90B-201ENST00000260054 SLC25A29Q8N8R3 303 aa11.08□□□□□ -0.64
CCDC90B-201ENST00000260054 PRO0255Q9UI72 69 aa11.08□□□□□ -0.64
CCDC90B-201ENST00000260054 DNAH7Q8WXX0 4024 aa11.08□□□□□ -0.64
CCDC90B-201ENST00000260054 TRAV26-1A0A087WT03 109 aa11.08□□□□□ -0.64
CCDC90B-201ENST00000260054 TRAV26-2A0A0B4J265 109 aa11.08□□□□□ -0.64
CCDC90B-201ENST00000260054 MRPL52Q86TS9 123 aaKnown RBP11.08□□□□□ -0.64
CCDC90B-201ENST00000260054 VSIG2Q96IQ7 327 aa11.08□□□□□ -0.64
CCDC90B-201ENST00000260054 WWC2-AS2Q96NR7 200 aa11.08□□□□□ -0.64
CCDC90B-201ENST00000260054 A0A0J9YY99 117 aa11.07□□□□□ -0.64
CCDC90B-201ENST00000260054 TRBV6-4A0A1B0GX49 114 aa11.07□□□□□ -0.64
CCDC90B-201ENST00000260054 GNB1LQ9BYB4 327 aa11.07□□□□□ -0.64
CCDC90B-201ENST00000260054 Q9UF83 564 aa11.07□□□□□ -0.64
CCDC90B-201ENST00000260054 K7EQD1 137 aa11.06□□□□□ -0.64
CCDC90B-201ENST00000260054 GAS8-AS1O95177 125 aa11.06□□□□□ -0.64
CCDC90B-201ENST00000260054 P0DMU3 169 aa11.06□□□□□ -0.64
CCDC90B-201ENST00000260054 FAM231AP0DMU4 169 aa11.06□□□□□ -0.64
CCDC90B-201ENST00000260054 FAM231CP0DMU5 169 aa11.06□□□□□ -0.64
CCDC90B-201ENST00000260054 SLAQ13239 276 aa11.06□□□□□ -0.64
CCDC90B-201ENST00000260054 MRPL51Q4U2R6 128 aaKnown RBP11.06□□□□□ -0.64
CCDC90B-201ENST00000260054 LOC100131303A0A0U1RQF7 123 aa11.05□□□□□ -0.64
CCDC90B-201ENST00000260054 M0QY20 66 aa11.05□□□□□ -0.64
CCDC90B-201ENST00000260054 COX19Q49B96 90 aa11.05□□□□□ -0.64
CCDC90B-201ENST00000260054 TCAPO15273 167 aa11.04□□□□□ -0.64
CCDC90B-201ENST00000260054 PAX4O43316 350 aa11.04□□□□□ -0.64
CCDC90B-201ENST00000260054 HLA-DQA1P01909 254 aa11.04□□□□□ -0.64
CCDC90B-201ENST00000260054 RHOHQ15669 191 aa11.04□□□□□ -0.64
CCDC90B-201ENST00000260054 TRAPPC1Q9Y5R8 145 aa11.04□□□□□ -0.64
CCDC90B-201ENST00000260054 SMKR1H3BMG3 65 aa11.04□□□□□ -0.64
CCDC90B-201ENST00000260054 NCR2O95944 276 aa11.04□□□□□ -0.64
CCDC90B-201ENST00000260054 CEMP1Q6PRD7 247 aaPredicted RBP11.04□□□□□ -0.64
CCDC90B-201ENST00000260054 MUC7Q8TAX7 377 aa11.04□□□□□ -0.64
CCDC90B-201ENST00000260054 MRAP2Q96G30 205 aa11.04□□□□□ -0.64
CCDC90B-201ENST00000260054 PRADC1Q9BSG0 188 aa11.04□□□□□ -0.64
CCDC90B-201ENST00000260054 CSMD3Q7Z407 3707 aa11.03□□□□□ -0.64
CCDC90B-201ENST00000260054 M0R143 59 aa11.03□□□□□ -0.64
CCDC90B-201ENST00000260054 MT-ND6P03923 174 aa11.03□□□□□ -0.64
CCDC90B-201ENST00000260054 STARD9Q9P2P6 4700 aa11.02□□□□□ -0.64
CCDC90B-201ENST00000260054 NUPR2A6NF83 97 aa11.02□□□□□ -0.64
CCDC90B-201ENST00000260054 D6R8Y8 96 aa11.02□□□□□ -0.64
CCDC90B-201ENST00000260054 EREGO14944 169 aa11.02□□□□□ -0.64
CCDC90B-201ENST00000260054 APCSP02743 223 aa11.02□□□□□ -0.64
CCDC90B-201ENST00000260054 GYPEP15421 78 aa11.02□□□□□ -0.64
CCDC90B-201ENST00000260054 ZFAND6Q6FIF0 208 aa11.02□□□□□ -0.64
CCDC90B-201ENST00000260054 NEXN-AS1Q8NBZ9 246 aa11.02□□□□□ -0.64
CCDC90B-201ENST00000260054 RPL39LQ96EH5 51 aaKnown RBP11.02□□□□□ -0.64
CCDC90B-201ENST00000260054 MRPL18Q9H0U6 180 aaKnown RBP11.02□□□□□ -0.64
CCDC90B-201ENST00000260054 TRBV10-1A0A0K0K1A3 114 aa11.01□□□□□ -0.65
CCDC90B-201ENST00000260054 IGLL5B9A064 214 aa11.01□□□□□ -0.65
CCDC90B-201ENST00000260054 H3BNG1 76 aa11.01□□□□□ -0.65
CCDC90B-201ENST00000260054 H7C1H1 209 aa11.01□□□□□ -0.65
CCDC90B-201ENST00000260054 ESDP10768 282 aa11.01□□□□□ -0.65
CCDC90B-201ENST00000260054 CKS2P33552 79 aa11.01□□□□□ -0.65
CCDC90B-201ENST00000260054 KIAA1644Q3SXP7 199 aa11.01□□□□□ -0.65
CCDC90B-201ENST00000260054 GAGE12JA6NER3 117 aa11.01□□□□□ -0.65
CCDC90B-201ENST00000260054 GAGE1Q13065 139 aa11.01□□□□□ -0.65
CCDC90B-201ENST00000260054 GAGE4Q13068 117 aa11.01□□□□□ -0.65
CCDC90B-201ENST00000260054 GAGE5Q13069 117 aa11.01□□□□□ -0.65
CCDC90B-201ENST00000260054 GAGE13Q4V321 117 aa11.01□□□□□ -0.65
CCDC90B-201ENST00000260054 A0A096LPF7 62 aa11□□□□□ -0.65
CCDC90B-201ENST00000260054 SCGB1D1O95968 90 aa11□□□□□ -0.65
CCDC90B-201ENST00000260054 NRACQ8N912 160 aa11□□□□□ -0.65
CCDC90B-201ENST00000260054 ZNRF2Q8NHG8 242 aa11□□□□□ -0.65
CCDC90B-201ENST00000260054 SNHG12Q9BXW3 62 aa11□□□□□ -0.65
CCDC90B-201ENST00000260054 PPBPP02775 128 aa10.99□□□□□ -0.65
CCDC90B-201ENST00000260054 LINC00694P0DN24 101 aa10.99□□□□□ -0.65
CCDC90B-201ENST00000260054 ORMDL3Q8N138 153 aa10.99□□□□□ -0.65
CCDC90B-201ENST00000260054 TRBV7-3A0A075B6L6 115 aa10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 NUDT3O95989 172 aa10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 NPYP01303 97 aa10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 RPL36AP83881 106 aaKnown RBP10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 OR10J3Q5JRS4 329 aa10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 RPL36ALQ969Q0 106 aaKnown RBP10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 ICOSQ9Y6W8 199 aa10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 DYNC2H1Q8NCM8 4307 aaKnown RBP10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 MRPL23Q16540 153 aaKnown RBP10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 C15orf53Q8NAA6 179 aa10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 DNAJC30Q96LL9 226 aa10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 PRELID3AQ96N28 172 aa10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 KLK5Q9Y337 293 aaPredicted RBP10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 TNFRSF18Q9Y5U5 241 aa10.98□□□□□ -0.65
CCDC90B-201ENST00000260054 TNFRSF6BO95407 300 aa10.97□□□□□ -0.65
CCDC90B-201ENST00000260054 SRIP30626 198 aa10.97□□□□□ -0.65
CCDC90B-201ENST00000260054 UBE2D3P61077 147 aa10.97□□□□□ -0.65
CCDC90B-201ENST00000260054 UBE2D2P62837 147 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms