RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 SUMO4Q6EEV6 95 aa9.68□□□□□ -0.86
THSD1-201ENST00000258613 HHLA3Q9XRX5 114 aa9.68□□□□□ -0.86
THSD1-201ENST00000258613 LINC01546A6NGU7 62 aa9.68□□□□□ -0.86
THSD1-201ENST00000258613 K7EMI3 77 aa9.68□□□□□ -0.86
THSD1-201ENST00000258613 EMP1P54849 157 aa9.68□□□□□ -0.86
THSD1-201ENST00000258613 PROK1P58294 105 aa9.68□□□□□ -0.86
THSD1-201ENST00000258613 Q8N2B8 174 aa9.68□□□□□ -0.86
THSD1-201ENST00000258613 RNF183Q96D59 192 aa9.68□□□□□ -0.86
THSD1-201ENST00000258613 Q9UF83 564 aa9.68□□□□□ -0.86
THSD1-201ENST00000258613 ATRQ13535 2644 aa9.68□□□□□ -0.86
THSD1-201ENST00000258613 SMIM20Q8N5G0 67 aa9.67□□□□□ -0.86
THSD1-201ENST00000258613 J3QKU1 62 aa9.67□□□□□ -0.86
THSD1-201ENST00000258613 RAX2Q96IS3 184 aa9.67□□□□□ -0.86
THSD1-201ENST00000258613 C9orf118A6NHY6 69 aa9.66□□□□□ -0.86
THSD1-201ENST00000258613 RPL39P62891 51 aaKnown RBP9.66□□□□□ -0.86
THSD1-201ENST00000258613 ZNF256Q9Y2P7 627 aaPredicted RBP9.66□□□□□ -0.86
THSD1-201ENST00000258613 IGHV1OR15-1A0A075B7D0 117 aa9.66□□□□□ -0.86
THSD1-201ENST00000258613 P0DMU3 169 aa9.66□□□□□ -0.86
THSD1-201ENST00000258613 FAM231AP0DMU4 169 aa9.66□□□□□ -0.86
THSD1-201ENST00000258613 FAM231CP0DMU5 169 aa9.66□□□□□ -0.86
THSD1-201ENST00000258613 RAB37Q96AX2 223 aa9.66□□□□□ -0.86
THSD1-201ENST00000258613 CITED2Q99967 270 aaPredicted RBP9.66□□□□□ -0.86
THSD1-201ENST00000258613 SPCS1Q9Y6A9 102 aa9.66□□□□□ -0.86
THSD1-201ENST00000258613 HIVEP1P15822 2718 aa9.66□□□□□ -0.86
THSD1-201ENST00000258613 ZNF56Q15929 161 aa9.66□□□□□ -0.86
THSD1-201ENST00000258613 ZNF876PQ49A33 203 aa9.66□□□□□ -0.86
THSD1-201ENST00000258613 DYNLRB2Q8TF09 96 aa9.66□□□□□ -0.86
THSD1-201ENST00000258613 CITED1Q99966 193 aa9.66□□□□□ -0.86
THSD1-201ENST00000258613 OR11H12B2RN74 326 aa9.65□□□□□ -0.86
THSD1-201ENST00000258613 DUSP14O95147 198 aaKnown RBP9.65□□□□□ -0.86
THSD1-201ENST00000258613 OR11H2Q8NH07 326 aa9.65□□□□□ -0.86
THSD1-201ENST00000258613 C4orf3Q8WVX3 66 aa9.65□□□□□ -0.86
THSD1-201ENST00000258613 SCGB3A1Q96QR1 104 aa9.65□□□□□ -0.86
THSD1-201ENST00000258613 SPATA25Q9BR10 227 aa9.65□□□□□ -0.86
THSD1-201ENST00000258613 TNFRSF18Q9Y5U5 241 aa9.65□□□□□ -0.86
THSD1-201ENST00000258613 NSD1Q96L73 2696 aaPredicted RBP9.65□□□□□ -0.86
THSD1-201ENST00000258613 C2orf66Q6UXQ4 117 aa9.65□□□□□ -0.87
THSD1-201ENST00000258613 FOXI2Q6ZQN5 318 aa9.65□□□□□ -0.87
THSD1-201ENST00000258613 IGKCP01834 107 aa9.64□□□□□ -0.87
THSD1-201ENST00000258613 IGHV3OR16-12A0A075B7B8 117 aa9.64□□□□□ -0.87
THSD1-201ENST00000258613 H3BMM0 161 aa9.64□□□□□ -0.87
THSD1-201ENST00000258613 B5MCH6 92 aa9.63□□□□□ -0.87
THSD1-201ENST00000258613 CRYGDP07320 174 aa9.63□□□□□ -0.87
THSD1-201ENST00000258613 DEFB114Q30KQ6 69 aa9.63□□□□□ -0.87
THSD1-201ENST00000258613 MORN3Q6PF18 240 aaPredicted RBP9.63□□□□□ -0.87
THSD1-201ENST00000258613 C9orf85Q96MD7 179 aa9.63□□□□□ -0.87
THSD1-201ENST00000258613 OPRPNQ99935 248 aaPredicted RBP9.63□□□□□ -0.87
THSD1-201ENST00000258613 MAP6D1Q9H9H5 199 aa9.63□□□□□ -0.87
THSD1-201ENST00000258613 MRPL16Q9NX20 251 aaKnown RBP9.63□□□□□ -0.87
THSD1-201ENST00000258613 SDHAF1A6NFY7 115 aa9.63□□□□□ -0.87
THSD1-201ENST00000258613 NXPH4O95158 308 aa9.63□□□□□ -0.87
THSD1-201ENST00000258613 RPL32P62910 135 aaKnown RBP9.63□□□□□ -0.87
THSD1-201ENST00000258613 XCL2Q9UBD3 114 aa9.63□□□□□ -0.87
THSD1-201ENST00000258613 MED14OSP0DP75 135 aa9.62□□□□□ -0.87
THSD1-201ENST00000258613 MAPKAPK5-AS1Q8N8E1 139 aa9.62□□□□□ -0.87
THSD1-201ENST00000258613 WFDC10AQ9H1F0 79 aa9.62□□□□□ -0.87
THSD1-201ENST00000258613 ZMAT4Q9H898 229 aa9.62□□□□□ -0.87
THSD1-201ENST00000258613 DPM2O94777 84 aa9.62□□□□□ -0.87
THSD1-201ENST00000258613 LINC01006Q8NI28 216 aa9.62□□□□□ -0.87
THSD1-201ENST00000258613 ATP5LO75964 103 aa9.61□□□□□ -0.87
THSD1-201ENST00000258613 OR5A1Q8NGJ0 315 aa9.61□□□□□ -0.87
THSD1-201ENST00000258613 C20orf78Q9BR46 151 aa9.61□□□□□ -0.87
THSD1-201ENST00000258613 PEMTQ9UBM1 199 aa9.61□□□□□ -0.87
THSD1-201ENST00000258613 TRRAPQ9Y4A5 3859 aa9.61□□□□□ -0.87
THSD1-201ENST00000258613 CCL24O00175 119 aa9.61□□□□□ -0.87
THSD1-201ENST00000258613 HLA-DRB4P13762 266 aa9.61□□□□□ -0.87
THSD1-201ENST00000258613 TMEM97Q5BJF2 176 aa9.61□□□□□ -0.87
THSD1-201ENST00000258613 TP53TG1Q9Y2A0 90 aa9.61□□□□□ -0.87
THSD1-201ENST00000258613 HLA-DRB4X5D2U9 266 aa9.61□□□□□ -0.87
THSD1-201ENST00000258613 A0A1W2PPM0 123 aa9.6□□□□□ -0.87
THSD1-201ENST00000258613 H3BRM9 83 aa9.6□□□□□ -0.87
THSD1-201ENST00000258613 TSHBP01222 138 aa9.6□□□□□ -0.87
THSD1-201ENST00000258613 TOMM6Q96B49 74 aa9.6□□□□□ -0.87
THSD1-201ENST00000258613 A0A087WX48 190 aa9.6□□□□□ -0.87
THSD1-201ENST00000258613 SEC11AP67812 179 aa9.6□□□□□ -0.87
THSD1-201ENST00000258613 ODF3L2Q3SX64 289 aa9.6□□□□□ -0.87
THSD1-201ENST00000258613 BAALCQ8WXS3 180 aa9.6□□□□□ -0.87
THSD1-201ENST00000258613 SPAG8Q99932 426 aaPredicted RBP9.6□□□□□ -0.87
THSD1-201ENST00000258613 TEP1Q99973 2627 aaKnown RBP9.6□□□□□ -0.87
THSD1-201ENST00000258613 M0QY20 66 aa9.6□□□□□ -0.87
THSD1-201ENST00000258613 POLR2KP53803 58 aaKnown RBP9.6□□□□□ -0.87
THSD1-201ENST00000258613 ORMDL2Q53FV1 153 aa9.6□□□□□ -0.87
THSD1-201ENST00000258613 ZFP2Q6ZN57 461 aa9.6□□□□□ -0.87
THSD1-201ENST00000258613 Q6ZSN1 163 aa9.6□□□□□ -0.87
THSD1-201ENST00000258613 PRSS29PA6NIE9 313 aa9.59□□□□□ -0.87
THSD1-201ENST00000258613 INSL3P51460 131 aa9.59□□□□□ -0.87
THSD1-201ENST00000258613 SH2D6Q7Z4S9 175 aa9.59□□□□□ -0.87
THSD1-201ENST00000258613 ODF3Q96PU9 254 aa9.59□□□□□ -0.87
THSD1-201ENST00000258613 ERG28Q9UKR5 140 aa9.59□□□□□ -0.87
THSD1-201ENST00000258613 NSUN5P1Q3KNT7 163 aa9.59□□□□□ -0.87
THSD1-201ENST00000258613 MTURNQ8N3F0 131 aa9.59□□□□□ -0.87
THSD1-201ENST00000258613 ZNF418Q8TF45 676 aaPredicted RBP9.59□□□□□ -0.87
THSD1-201ENST00000258613 LINC01587Q99440 93 aa9.59□□□□□ -0.87
THSD1-201ENST00000258613 WFDC2Q14508 124 aa9.58□□□□□ -0.88
THSD1-201ENST00000258613 NEXN-AS1Q8NBZ9 246 aa9.58□□□□□ -0.88
THSD1-201ENST00000258613 SPANXB1Q9NS25 103 aaPredicted RBP9.58□□□□□ -0.88
THSD1-201ENST00000258613 GAGE5Q13069 117 aa9.57□□□□□ -0.88
THSD1-201ENST00000258613 GAGE6Q13070 117 aa9.57□□□□□ -0.88
THSD1-201ENST00000258613 POM121L12Q8N7R1 296 aa9.57□□□□□ -0.88
THSD1-201ENST00000258613 SYT8Q8NBV8 401 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms