RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 C14orf144Q96I85 54 aa10□□□□□ -0.81
PRPF38A-201ENST00000257181 DEFB4AO15263 64 aa10□□□□□ -0.81
PRPF38A-201ENST00000257181 UTF1Q5T230 341 aa10□□□□□ -0.81
PRPF38A-201ENST00000257181 TOMM6Q96B49 74 aa10□□□□□ -0.81
PRPF38A-201ENST00000257181 SPINK8P0C7L1 97 aa9.99□□□□□ -0.81
PRPF38A-201ENST00000257181 MDFICQ9P1T7 246 aa9.99□□□□□ -0.81
PRPF38A-201ENST00000257181 Q6ZTI0 123 aa9.99□□□□□ -0.81
PRPF38A-201ENST00000257181 E7EUB6 86 aa9.99□□□□□ -0.81
PRPF38A-201ENST00000257181 SNAI2O43623 268 aa9.98□□□□□ -0.81
PRPF38A-201ENST00000257181 ZFAND2AQ8N6M9 145 aa9.98□□□□□ -0.81
PRPF38A-201ENST00000257181 OXLD1Q5BKU9 147 aa9.98□□□□□ -0.81
PRPF38A-201ENST00000257181 MORN5Q5VZ52 161 aa9.98□□□□□ -0.81
PRPF38A-201ENST00000257181 C5orf38Q86SI9 138 aa9.98□□□□□ -0.81
PRPF38A-201ENST00000257181 C20orf203Q8NBC4 194 aa9.98□□□□□ -0.81
PRPF38A-201ENST00000257181 SPTBN1Q01082 2364 aaKnown RBP9.98□□□□□ -0.81
PRPF38A-201ENST00000257181 A0A0J9YWU9 116 aa9.98□□□□□ -0.81
PRPF38A-201ENST00000257181 Q9H8V8 135 aa9.98□□□□□ -0.81
PRPF38A-201ENST00000257181 PKDREJQ9NTG1 2253 aa9.98□□□□□ -0.81
PRPF38A-201ENST00000257181 TRBV6-8A0A0A6YYG3 113 aa9.98□□□□□ -0.81
PRPF38A-201ENST00000257181 C3orf79P0CE67 100 aa9.98□□□□□ -0.81
PRPF38A-201ENST00000257181 LOC107984640A0A0U1RRK4 108 aa9.97□□□□□ -0.81
PRPF38A-201ENST00000257181 FAM208BQ5VWN6 2430 aa9.97□□□□□ -0.81
PRPF38A-201ENST00000257181 C2orf82Q6UX34 121 aa9.97□□□□□ -0.81
PRPF38A-201ENST00000257181 COLCA2A8K830 154 aa9.97□□□□□ -0.81
PRPF38A-201ENST00000257181 CTAG1AP78358 180 aa9.97□□□□□ -0.81
PRPF38A-201ENST00000257181 HIST3H2BBQ8N257 126 aa9.97□□□□□ -0.81
PRPF38A-201ENST00000257181 TINCRA0A1B0GVN0 87 aa9.96□□□□□ -0.81
PRPF38A-201ENST00000257181 C11orf86A6NJI1 115 aa9.96□□□□□ -0.81
PRPF38A-201ENST00000257181 UBE2D1P51668 147 aa9.96□□□□□ -0.81
PRPF38A-201ENST00000257181 EML6Q6ZMW3 1958 aa9.96□□□□□ -0.82
PRPF38A-201ENST00000257181 C11orf1Q9H5F2 150 aa9.96□□□□□ -0.82
PRPF38A-201ENST00000257181 PROP1O75360 226 aa9.96□□□□□ -0.82
PRPF38A-201ENST00000257181 GAGE2EQ4V326 116 aa9.96□□□□□ -0.82
PRPF38A-201ENST00000257181 C1orf134Q5TEV5 83 aa9.96□□□□□ -0.82
PRPF38A-201ENST00000257181 GAGE2DQ9UEU5 116 aa9.96□□□□□ -0.82
PRPF38A-201ENST00000257181 MED13Q9UHV7 2174 aa9.96□□□□□ -0.82
PRPF38A-201ENST00000257181 ZFAND6Q6FIF0 208 aa9.95□□□□□ -0.82
PRPF38A-201ENST00000257181 DIRC1Q969H9 104 aa9.95□□□□□ -0.82
PRPF38A-201ENST00000257181 CREBBPQ92793 2442 aa9.95□□□□□ -0.82
PRPF38A-201ENST00000257181 CFAP126Q5VTH2 177 aa9.95□□□□□ -0.82
PRPF38A-201ENST00000257181 HIST1H2BLQ99880 126 aa9.95□□□□□ -0.82
PRPF38A-201ENST00000257181 MSRB1Q9NZV6 116 aa9.95□□□□□ -0.82
PRPF38A-201ENST00000257181 KLLNB2CW77 178 aa9.95□□□□□ -0.82
PRPF38A-201ENST00000257181 PDE6GP18545 87 aa9.94□□□□□ -0.82
PRPF38A-201ENST00000257181 C10orf91Q5T1B1 145 aa9.94□□□□□ -0.82
PRPF38A-201ENST00000257181 C19orf71A6NCJ1 209 aa9.94□□□□□ -0.82
PRPF38A-201ENST00000257181 OCIAD2Q56VL3 154 aa9.94□□□□□ -0.82
PRPF38A-201ENST00000257181 TNRC6BQ9UPQ9 1833 aaKnown RBP9.94□□□□□ -0.82
PRPF38A-201ENST00000257181 CHD3Q12873 2000 aaKnown RBP9.94□□□□□ -0.82
PRPF38A-201ENST00000257181 UBL5Q9BZL1 73 aa9.94□□□□□ -0.82
PRPF38A-201ENST00000257181 ORMDL1Q9P0S3 153 aa9.94□□□□□ -0.82
PRPF38A-201ENST00000257181 ANKHD1Q8IWZ3 2542 aaKnown RBP9.94□□□□□ -0.82
PRPF38A-201ENST00000257181 IGLV4-69A0A075B6H9 119 aa9.94□□□□□ -0.82
PRPF38A-201ENST00000257181 NPC2P61916 151 aa9.94□□□□□ -0.82
PRPF38A-201ENST00000257181 TRBV6-5A0A0K0K1A5 114 aa9.93□□□□□ -0.82
PRPF38A-201ENST00000257181 A0A1W2PPR1 153 aa9.93□□□□□ -0.82
PRPF38A-201ENST00000257181 SYCNQ0VAF6 134 aa9.93□□□□□ -0.82
PRPF38A-201ENST00000257181 CHCHD10Q8WYQ3 142 aaPredicted RBP9.93□□□□□ -0.82
PRPF38A-201ENST00000257181 OPRPNQ99935 248 aaPredicted RBP9.93□□□□□ -0.82
PRPF38A-201ENST00000257181 MRPL35Q9NZE8 188 aaKnown RBP9.93□□□□□ -0.82
PRPF38A-201ENST00000257181 IGLV10-54A0A075B6I4 117 aa9.93□□□□□ -0.82
PRPF38A-201ENST00000257181 DCANP1Q8TF63 244 aa9.93□□□□□ -0.82
PRPF38A-201ENST00000257181 ESM1Q9NQ30 184 aa9.93□□□□□ -0.82
PRPF38A-201ENST00000257181 K7EN84 100 aa9.93□□□□□ -0.82
PRPF38A-201ENST00000257181 AKAP6Q13023 2319 aa9.93□□□□□ -0.82
PRPF38A-201ENST00000257181 TRAV8-2A0A0B4J237 113 aa9.92□□□□□ -0.82
PRPF38A-201ENST00000257181 WWC2-AS2Q96NR7 200 aa9.92□□□□□ -0.82
PRPF38A-201ENST00000257181 POLEQ07864 2286 aa9.92□□□□□ -0.82
PRPF38A-201ENST00000257181 CRIP3Q6Q6R5 217 aa9.92□□□□□ -0.82
PRPF38A-201ENST00000257181 PRB4P10163 310 aaPredicted RBP9.92□□□□□ -0.82
PRPF38A-201ENST00000257181 ODF1Q14990 250 aa9.92□□□□□ -0.82
PRPF38A-201ENST00000257181 ZNF625Q96I27 306 aaPredicted RBP9.92□□□□□ -0.82
PRPF38A-201ENST00000257181 CUL9Q8IWT3 2517 aa9.91□□□□□ -0.82
PRPF38A-201ENST00000257181 H3BUT2 72 aa9.91□□□□□ -0.82
PRPF38A-201ENST00000257181 IGLC6P0CF74 106 aa9.91□□□□□ -0.82
PRPF38A-201ENST00000257181 C3orf84H3BNL1 204 aa9.91□□□□□ -0.82
PRPF38A-201ENST00000257181 PRO1854Q9UHT4 67 aa9.91□□□□□ -0.82
PRPF38A-201ENST00000257181 PYGO1Q9Y3Y4 419 aa9.91□□□□□ -0.82
PRPF38A-201ENST00000257181 RPL39LQ96EH5 51 aaKnown RBP9.91□□□□□ -0.82
PRPF38A-201ENST00000257181 BRWD1-AS2P59051 145 aa9.9□□□□□ -0.82
PRPF38A-201ENST00000257181 LINC00269Q8N2A0 174 aa9.9□□□□□ -0.82
PRPF38A-201ENST00000257181 SND1-IT1Q9HBX3 110 aa9.9□□□□□ -0.82
PRPF38A-201ENST00000257181 ATRAIDQ6UW56 229 aa9.9□□□□□ -0.82
PRPF38A-201ENST00000257181 CD164L2Q6UWJ8 174 aa9.9□□□□□ -0.82
PRPF38A-201ENST00000257181 MED12LQ86YW9 2145 aa9.9□□□□□ -0.82
PRPF38A-201ENST00000257181 C20orf173Q96LM9 149 aa9.9□□□□□ -0.82
PRPF38A-201ENST00000257181 KIAA2026Q5HYC2 2103 aa9.9□□□□□ -0.83
PRPF38A-201ENST00000257181 ACACBO00763 2458 aa9.9□□□□□ -0.83
PRPF38A-201ENST00000257181 H3BNG1 76 aa9.89□□□□□ -0.83
PRPF38A-201ENST00000257181 NEXN-AS1Q8NBZ9 246 aa9.89□□□□□ -0.83
PRPF38A-201ENST00000257181 CPAMD8Q8IZJ3 1885 aa9.89□□□□□ -0.83
PRPF38A-201ENST00000257181 C10orf99Q6UWK7 81 aa9.89□□□□□ -0.83
PRPF38A-201ENST00000257181 C9orf85Q96MD7 179 aa9.89□□□□□ -0.83
PRPF38A-201ENST00000257181 GATA1P15976 413 aaPredicted RBP9.88□□□□□ -0.83
PRPF38A-201ENST00000257181 KRTAP24-1Q3LI83 254 aa9.88□□□□□ -0.83
PRPF38A-201ENST00000257181 GTSF1Q8WW33 167 aa9.88□□□□□ -0.83
PRPF38A-201ENST00000257181 NANOS2P60321 138 aaKnown RBP9.88□□□□□ -0.83
PRPF38A-201ENST00000257181 MRPS36P82909 103 aaKnown RBP9.88□□□□□ -0.83
PRPF38A-201ENST00000257181 A0A0J9YXY3 114 aa9.88□□□□□ -0.83
PRPF38A-201ENST00000257181 COX8AP10176 69 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms