RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 C3orf56Q8N813 242 aa13.71□□□□□ -0.21
TRIM47-201ENST00000254816 C11orf72Q8NBR9 251 aa13.71□□□□□ -0.21
TRIM47-201ENST00000254816 WFDC9Q8NEX5 89 aa13.71□□□□□ -0.21
TRIM47-201ENST00000254816 ORAOV1Q8WV07 137 aa13.71□□□□□ -0.21
TRIM47-201ENST00000254816 RPL39LQ96EH5 51 aaKnown RBP13.71□□□□□ -0.21
TRIM47-201ENST00000254816 MRAP2Q96G30 205 aa13.71□□□□□ -0.21
TRIM47-201ENST00000254816 ZNF415Q09FC8 603 aa13.71□□□□□ -0.21
TRIM47-201ENST00000254816 LAGE3Q14657 143 aa13.71□□□□□ -0.21
TRIM47-201ENST00000254816 C12orf54Q6X4T0 127 aa13.71□□□□□ -0.21
TRIM47-201ENST00000254816 LINC00467Q9BRT7 94 aa13.71□□□□□ -0.21
TRIM47-201ENST00000254816 NMUP48645 174 aa13.7□□□□□ -0.22
TRIM47-201ENST00000254816 RASL10AQ92737 203 aa13.7□□□□□ -0.22
TRIM47-201ENST00000254816 NACAE9PAV3 2078 aa13.7□□□□□ -0.22
TRIM47-201ENST00000254816 MAST4O15021 2626 aa13.7□□□□□ -0.22
TRIM47-201ENST00000254816 F5H697 171 aa13.69□□□□□ -0.22
TRIM47-201ENST00000254816 PCP2Q8IVA1 136 aa13.69□□□□□ -0.22
TRIM47-201ENST00000254816 CMYA5Q8N3K9 4069 aa13.69□□□□□ -0.22
TRIM47-201ENST00000254816 PRSS47A8MTI9 375 aa13.69□□□□□ -0.22
TRIM47-201ENST00000254816 CRYGDP07320 174 aa13.69□□□□□ -0.22
TRIM47-201ENST00000254816 SMIM2Q9BVW6 85 aa13.69□□□□□ -0.22
TRIM47-201ENST00000254816 STAB1Q9NY15 2570 aa13.68□□□□□ -0.22
TRIM47-201ENST00000254816 TAX1BP3O14907 124 aa13.68□□□□□ -0.22
TRIM47-201ENST00000254816 BOD1L2Q8IYS8 172 aa13.68□□□□□ -0.22
TRIM47-201ENST00000254816 POM121L12Q8N7R1 296 aa13.68□□□□□ -0.22
TRIM47-201ENST00000254816 SUMO4Q6EEV6 95 aa13.67□□□□□ -0.22
TRIM47-201ENST00000254816 M0R2P5 195 aa13.67□□□□□ -0.22
TRIM47-201ENST00000254816 CCL25O15444 150 aa13.67□□□□□ -0.22
TRIM47-201ENST00000254816 CSNK1G2-AS1Q8NCQ2 148 aa13.67□□□□□ -0.22
TRIM47-201ENST00000254816 MRPL16Q9NX20 251 aaKnown RBP13.67□□□□□ -0.22
TRIM47-201ENST00000254816 ZNF56Q15929 161 aa13.66□□□□□ -0.22
TRIM47-201ENST00000254816 MORN3Q6PF18 240 aaPredicted RBP13.66□□□□□ -0.22
TRIM47-201ENST00000254816 IGKV2D-26A0A0A0MRZ7 120 aa13.66□□□□□ -0.22
TRIM47-201ENST00000254816 IGHV3-73A0A0B4J1V6 119 aa13.66□□□□□ -0.22
TRIM47-201ENST00000254816 ZMAT4Q9H898 229 aa13.66□□□□□ -0.22
TRIM47-201ENST00000254816 SUMO2P61956 95 aaKnown RBP13.65□□□□□ -0.22
TRIM47-201ENST00000254816 TTTY13Q9BZ97 58 aa13.65□□□□□ -0.22
TRIM47-201ENST00000254816 HHLA3Q9XRX5 114 aa13.65□□□□□ -0.22
TRIM47-201ENST00000254816 IGKCP01834 107 aa13.65□□□□□ -0.22
TRIM47-201ENST00000254816 PTTG1IPP53801 180 aa13.65□□□□□ -0.22
TRIM47-201ENST00000254816 TMEM97Q5BJF2 176 aa13.65□□□□□ -0.22
TRIM47-201ENST00000254816 RNASE8Q8TDE3 154 aaKnown RBP13.65□□□□□ -0.22
TRIM47-201ENST00000254816 C1QTNF4Q9BXJ3 329 aa13.65□□□□□ -0.22
TRIM47-201ENST00000254816 ATP5LO75964 103 aa13.64□□□□□ -0.23
TRIM47-201ENST00000254816 OXLD1Q5BKU9 147 aa13.64□□□□□ -0.23
TRIM47-201ENST00000254816 SHISA2Q6UWI4 295 aa13.64□□□□□ -0.23
TRIM47-201ENST00000254816 CSTL1Q9H114 145 aa13.64□□□□□ -0.23
TRIM47-201ENST00000254816 MRPL35Q9NZE8 188 aaKnown RBP13.64□□□□□ -0.23
TRIM47-201ENST00000254816 SPXQ9BT56 116 aa13.63□□□□□ -0.23
TRIM47-201ENST00000254816 DPM2O94777 84 aa13.62□□□□□ -0.23
TRIM47-201ENST00000254816 VAMP3Q15836 100 aa13.62□□□□□ -0.23
TRIM47-201ENST00000254816 TMEM263Q8WUH6 116 aaKnown RBP13.62□□□□□ -0.23
TRIM47-201ENST00000254816 UBE2V1Q13404 147 aa13.62□□□□□ -0.23
TRIM47-201ENST00000254816 NEGR1Q7Z3B1 354 aa13.62□□□□□ -0.23
TRIM47-201ENST00000254816 DEFB104AQ8WTQ1 72 aa13.62□□□□□ -0.23
TRIM47-201ENST00000254816 ZC2HC1BQ5TFG8 222 aa13.61□□□□□ -0.23
TRIM47-201ENST00000254816 IL17DQ8TAD2 202 aa13.61□□□□□ -0.23
TRIM47-201ENST00000254816 WIPF1O43516 503 aa13.61□□□□□ -0.23
TRIM47-201ENST00000254816 C20orf78Q9BR46 151 aa13.61□□□□□ -0.23
TRIM47-201ENST00000254816 M0QY20 66 aa13.6□□□□□ -0.23
TRIM47-201ENST00000254816 CFAP126Q5VTH2 177 aa13.6□□□□□ -0.23
TRIM47-201ENST00000254816 TRGV1A0A0A0MS02 117 aa13.6□□□□□ -0.23
TRIM47-201ENST00000254816 A8MWV9 139 aa13.6□□□□□ -0.23
TRIM47-201ENST00000254816 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.6□□□□□ -0.23
TRIM47-201ENST00000254816 ORMDL2Q53FV1 153 aa13.6□□□□□ -0.23
TRIM47-201ENST00000254816 UFSP1Q6NVU6 142 aa13.59□□□□□ -0.23
TRIM47-201ENST00000254816 PTH2Q96A98 100 aa13.59□□□□□ -0.23
TRIM47-201ENST00000254816 NOP10Q9NPE3 64 aaKnown RBP13.59□□□□□ -0.23
TRIM47-201ENST00000254816 A0A087WX48 190 aa13.59□□□□□ -0.23
TRIM47-201ENST00000254816 PLAC8L1A1L4L8 177 aa13.59□□□□□ -0.23
TRIM47-201ENST00000254816 SCGB3A1Q96QR1 104 aa13.59□□□□□ -0.23
TRIM47-201ENST00000254816 PKD1L1Q8TDX9 2849 aa13.58□□□□□ -0.24
TRIM47-201ENST00000254816 P0DMU3 169 aa13.58□□□□□ -0.24
TRIM47-201ENST00000254816 FAM231AP0DMU4 169 aa13.58□□□□□ -0.24
TRIM47-201ENST00000254816 FAM231CP0DMU5 169 aa13.58□□□□□ -0.24
TRIM47-201ENST00000254816 RRN3P1Q2M238 152 aa13.58□□□□□ -0.24
TRIM47-201ENST00000254816 Q6ZTI0 123 aa13.58□□□□□ -0.24
TRIM47-201ENST00000254816 TOMM6Q96B49 74 aa13.58□□□□□ -0.24
TRIM47-201ENST00000254816 PPP1R17O96001 155 aa13.57□□□□□ -0.24
TRIM47-201ENST00000254816 HSD52Q0P140 79 aa13.57□□□□□ -0.24
TRIM47-201ENST00000254816 PIK3CD-AS1Q5SR53 167 aa13.57□□□□□ -0.24
TRIM47-201ENST00000254816 Q6ZSN1 163 aa13.57□□□□□ -0.24
TRIM47-201ENST00000254816 C16orf74Q96GX8 76 aa13.57□□□□□ -0.24
TRIM47-201ENST00000254816 SIVA1O15304 175 aa13.57□□□□□ -0.24
TRIM47-201ENST00000254816 SEC11AP67812 179 aa13.57□□□□□ -0.24
TRIM47-201ENST00000254816 COL6A5A8TX70 2615 aa13.57□□□□□ -0.24
TRIM47-201ENST00000254816 AMMECR1LQ6DCA0 310 aa13.56□□□□□ -0.24
TRIM47-201ENST00000254816 C2orf66Q6UXQ4 117 aa13.56□□□□□ -0.24
TRIM47-201ENST00000254816 RS1O15537 224 aa13.56□□□□□ -0.24
TRIM47-201ENST00000254816 KRTAP10-11P60412 298 aa13.56□□□□□ -0.24
TRIM47-201ENST00000254816 TRAV8-6A0A0B4J262 113 aa13.55□□□□□ -0.24
TRIM47-201ENST00000254816 SDHAF1A6NFY7 115 aa13.55□□□□□ -0.24
TRIM47-201ENST00000254816 POLR2KP53803 58 aaKnown RBP13.55□□□□□ -0.24
TRIM47-201ENST00000254816 Q9UF83 564 aa13.55□□□□□ -0.24
TRIM47-201ENST00000254816 EMP1P54849 157 aa13.54□□□□□ -0.24
TRIM47-201ENST00000254816 OR4C5Q8NGB2 326 aa13.54□□□□□ -0.24
TRIM47-201ENST00000254816 NBEAL2Q6ZNJ1 2754 aa13.54□□□□□ -0.24
TRIM47-201ENST00000254816 IGHV3-53P01767 116 aa13.53□□□□□ -0.24
TRIM47-201ENST00000254816 NAA38Q9BRA0 125 aaKnown RBP13.53□□□□□ -0.24
TRIM47-201ENST00000254816 TRBV6-5A0A0K0K1A5 114 aa13.53□□□□□ -0.24
TRIM47-201ENST00000254816 H7C1H1 209 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 385 ms