RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 NXPH4O95158 308 aa12.42□□□□□ -0.42
CDKN1A-201ENST00000244741 SAMD13Q5VXD3 122 aa12.42□□□□□ -0.42
CDKN1A-201ENST00000244741 FAM159AQ6UWV7 190 aa12.42□□□□□ -0.42
CDKN1A-201ENST00000244741 MUC4Q99102 2169 aa12.41□□□□□ -0.42
CDKN1A-201ENST00000244741 TRAV8-6A0A0B4J262 113 aa12.41□□□□□ -0.42
CDKN1A-201ENST00000244741 LINC00315P59091 139 aa12.41□□□□□ -0.42
CDKN1A-201ENST00000244741 ORMDL2Q53FV1 153 aa12.41□□□□□ -0.42
CDKN1A-201ENST00000244741 OR4C5Q8NGB2 326 aa12.41□□□□□ -0.42
CDKN1A-201ENST00000244741 KIF25-AS1Q9Y6Z4 181 aa12.41□□□□□ -0.42
CDKN1A-201ENST00000244741 DNAH3Q8TD57 4116 aa12.4□□□□□ -0.42
CDKN1A-201ENST00000244741 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.4□□□□□ -0.42
CDKN1A-201ENST00000244741 POM121L12Q8N7R1 296 aa12.4□□□□□ -0.42
CDKN1A-201ENST00000244741 JPT2Q9H910 190 aa12.4□□□□□ -0.42
CDKN1A-201ENST00000244741 KRTAP21-3Q3LHN1 58 aa12.4□□□□□ -0.42
CDKN1A-201ENST00000244741 TOMM6Q96B49 74 aa12.4□□□□□ -0.42
CDKN1A-201ENST00000244741 C19orf73Q9NVV2 129 aa12.4□□□□□ -0.42
CDKN1A-201ENST00000244741 A0A0J9YX75 114 aa12.39□□□□□ -0.43
CDKN1A-201ENST00000244741 WIPF1O43516 503 aa12.39□□□□□ -0.43
CDKN1A-201ENST00000244741 PRB2P02812 416 aaPredicted RBP12.39□□□□□ -0.43
CDKN1A-201ENST00000244741 SCGB3A1Q96QR1 104 aa12.39□□□□□ -0.43
CDKN1A-201ENST00000244741 A6NDN8 102 aa12.38□□□□□ -0.43
CDKN1A-201ENST00000244741 CSTL1Q9H114 145 aa12.38□□□□□ -0.43
CDKN1A-201ENST00000244741 TRAV12-2A0A075B6T6 113 aa12.37□□□□□ -0.43
CDKN1A-201ENST00000244741 H3BRM9 83 aa12.37□□□□□ -0.43
CDKN1A-201ENST00000244741 FOXI2Q6ZQN5 318 aa12.37□□□□□ -0.43
CDKN1A-201ENST00000244741 NEGR1Q7Z3B1 354 aa12.37□□□□□ -0.43
CDKN1A-201ENST00000244741 NBEAL2Q6ZNJ1 2754 aa12.37□□□□□ -0.43
CDKN1A-201ENST00000244741 TRAV12-1A0A0B4J245 112 aa12.37□□□□□ -0.43
CDKN1A-201ENST00000244741 K7EMI3 77 aa12.37□□□□□ -0.43
CDKN1A-201ENST00000244741 SAMD5Q5TGI4 173 aa12.37□□□□□ -0.43
CDKN1A-201ENST00000244741 H7C1H1 209 aa12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 C2orf66Q6UXQ4 117 aa12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 ODF3Q96PU9 254 aa12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 HIGD1BQ9P298 99 aa12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 TRBV25-1A0A075B6N4 114 aa12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 A0A087WWL8 130 aa12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 H3BMM0 161 aa12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 K7EP13 123 aa12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 PPP1R17O96001 155 aa12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 RPL35AP18077 110 aaKnown RBP12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 PLNP26678 52 aa12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 Q8N1Y9 231 aa12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 MAPKAPK5-AS1Q8N8E1 139 aa12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 NEXN-AS1Q8NBZ9 246 aa12.36□□□□□ -0.43
CDKN1A-201ENST00000244741 RBMY1BA6NDE4 496 aaKnown RBP12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 RBMY1EA6NEQ0 496 aaKnown RBP12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 C9orf118A6NHY6 69 aa12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 F8VRH5 84 aa12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 RBMY1DP0C7P1 496 aaKnown RBP12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 HLA-DRB4P13762 266 aa12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 SUMO4Q6EEV6 95 aa12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 STHQ8IWL8 128 aa12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 RNASE8Q8TDE3 154 aaKnown RBP12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 CHAC1Q9BUX1 264 aa12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 MDFICQ9P1T7 246 aa12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 HLA-DRB4X5D2U9 266 aa12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 IGHV3-16A0A0C4DH30 117 aa12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 EGFEM1PQ0D2K5 195 aa12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 CHTOPQ9Y3Y2 248 aaKnown RBP12.35□□□□□ -0.43
CDKN1A-201ENST00000244741 SPINK13Q1W4C9 94 aa12.34□□□□□ -0.43
CDKN1A-201ENST00000244741 DEFB104AQ8WTQ1 72 aa12.34□□□□□ -0.43
CDKN1A-201ENST00000244741 NAA38Q9BRA0 125 aaKnown RBP12.34□□□□□ -0.43
CDKN1A-201ENST00000244741 BAALCQ8WXS3 180 aa12.33□□□□□ -0.44
CDKN1A-201ENST00000244741 RAB37Q96AX2 223 aa12.33□□□□□ -0.44
CDKN1A-201ENST00000244741 C9orf85Q96MD7 179 aa12.33□□□□□ -0.44
CDKN1A-201ENST00000244741 H3BUT2 72 aa12.33□□□□□ -0.44
CDKN1A-201ENST00000244741 GCSHP23434 173 aa12.33□□□□□ -0.44
CDKN1A-201ENST00000244741 FXYD2P54710 66 aa12.33□□□□□ -0.44
CDKN1A-201ENST00000244741 F5H697 171 aa12.32□□□□□ -0.44
CDKN1A-201ENST00000244741 CDKN1BP46527 198 aa12.32□□□□□ -0.44
CDKN1A-201ENST00000244741 POLR2KP53803 58 aaKnown RBP12.32□□□□□ -0.44
CDKN1A-201ENST00000244741 RPL32P62910 135 aaKnown RBP12.32□□□□□ -0.44
CDKN1A-201ENST00000244741 IGHV1OR15-1A0A075B7D0 117 aa12.31□□□□□ -0.44
CDKN1A-201ENST00000244741 PRSS29PA6NIE9 313 aa12.31□□□□□ -0.44
CDKN1A-201ENST00000244741 DUSP14O95147 198 aaKnown RBP12.31□□□□□ -0.44
CDKN1A-201ENST00000244741 CMC4P56277 68 aaPredicted RBP12.31□□□□□ -0.44
CDKN1A-201ENST00000244741 AMTNQ6UX39 209 aa12.31□□□□□ -0.44
CDKN1A-201ENST00000244741 TRPT1Q86TN4 253 aaKnown RBP12.3□□□□□ -0.44
CDKN1A-201ENST00000244741 FAM110AQ9BQ89 295 aa12.3□□□□□ -0.44
CDKN1A-201ENST00000244741 GAGE10A6NGK3 116 aa12.3□□□□□ -0.44
CDKN1A-201ENST00000244741 FAM74A4Q5TZK3 123 aa12.3□□□□□ -0.44
CDKN1A-201ENST00000244741 XCL2Q9UBD3 114 aa12.3□□□□□ -0.44
CDKN1A-201ENST00000244741 ZFP2Q6ZN57 461 aa12.29□□□□□ -0.44
CDKN1A-201ENST00000244741 VCYO14598 125 aa12.29□□□□□ -0.44
CDKN1A-201ENST00000244741 TSHBP01222 138 aa12.29□□□□□ -0.44
CDKN1A-201ENST00000244741 IGHV4-30-4P0DP06 118 aa12.29□□□□□ -0.44
CDKN1A-201ENST00000244741 CYSLTR1Q9Y271 337 aa12.29□□□□□ -0.44
CDKN1A-201ENST00000244741 TP53TG1Q9Y2A0 90 aa12.29□□□□□ -0.44
CDKN1A-201ENST00000244741 SDHAF1A6NFY7 115 aa12.28□□□□□ -0.44
CDKN1A-201ENST00000244741 CRYGDP07320 174 aa12.28□□□□□ -0.44
CDKN1A-201ENST00000244741 SMIM13P0DJ93 91 aa12.28□□□□□ -0.44
CDKN1A-201ENST00000244741 UFSP1Q6NVU6 142 aa12.28□□□□□ -0.44
CDKN1A-201ENST00000244741 CEND1Q8N111 149 aa12.28□□□□□ -0.44
CDKN1A-201ENST00000244741 TM2D2Q9BX73 214 aa12.28□□□□□ -0.44
CDKN1A-201ENST00000244741 MORN3Q6PF18 240 aaPredicted RBP12.28□□□□□ -0.44
CDKN1A-201ENST00000244741 SYT8Q8NBV8 401 aa12.28□□□□□ -0.44
CDKN1A-201ENST00000244741 GAGE12BA1L429 117 aa12.27□□□□□ -0.45
CDKN1A-201ENST00000244741 IGIPA6NJ69 53 aa12.27□□□□□ -0.45
CDKN1A-201ENST00000244741 RPL39P62891 51 aaKnown RBP12.27□□□□□ -0.45
CDKN1A-201ENST00000244741 TRBV6-5A0A0K0K1A5 114 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms