RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 IGLV4-69A0A075B6H9 119 aa11.85□□□□□ -0.51
UBE3D-201ENST00000237186 TRAV25A0A0B4J276 109 aa11.85□□□□□ -0.51
UBE3D-201ENST00000237186 FXYD2P54710 66 aa11.85□□□□□ -0.51
UBE3D-201ENST00000237186 FHL3Q13643 280 aa11.85□□□□□ -0.51
UBE3D-201ENST00000237186 KHDC1LQ5JSQ8 128 aa11.85□□□□□ -0.51
UBE3D-201ENST00000237186 CEND1Q8N111 149 aa11.85□□□□□ -0.51
UBE3D-201ENST00000237186 CST9LQ9H4G1 147 aa11.85□□□□□ -0.51
UBE3D-201ENST00000237186 ITPR2Q14571 2701 aa11.85□□□□□ -0.51
UBE3D-201ENST00000237186 MYMXA0A1B0GTQ4 84 aa11.85□□□□□ -0.51
UBE3D-201ENST00000237186 SMIM13P0DJ93 91 aa11.85□□□□□ -0.51
UBE3D-201ENST00000237186 GCSHP23434 173 aa11.85□□□□□ -0.51
UBE3D-201ENST00000237186 AGRNO00468 2067 aa11.84□□□□□ -0.51
UBE3D-201ENST00000237186 FLNAP21333 2647 aaKnown RBP11.84□□□□□ -0.51
UBE3D-201ENST00000237186 TLN2Q9Y4G6 2542 aa11.84□□□□□ -0.51
UBE3D-201ENST00000237186 RPL39P62891 51 aaKnown RBP11.84□□□□□ -0.51
UBE3D-201ENST00000237186 CD300EQ496F6 205 aaPredicted RBP11.84□□□□□ -0.51
UBE3D-201ENST00000237186 UFSP1Q6NVU6 142 aa11.84□□□□□ -0.51
UBE3D-201ENST00000237186 I3L3M4 83 aa11.83□□□□□ -0.52
UBE3D-201ENST00000237186 M0R2P5 195 aa11.83□□□□□ -0.52
UBE3D-201ENST00000237186 FOSL1P15407 271 aa11.83□□□□□ -0.52
UBE3D-201ENST00000237186 RAX2Q96IS3 184 aa11.83□□□□□ -0.52
UBE3D-201ENST00000237186 ESM1Q9NQ30 184 aa11.83□□□□□ -0.52
UBE3D-201ENST00000237186 SORL1Q92673 2214 aa11.83□□□□□ -0.52
UBE3D-201ENST00000237186 ANK3Q12955 4377 aaKnown RBP11.83□□□□□ -0.52
UBE3D-201ENST00000237186 A8MWV9 139 aa11.83□□□□□ -0.52
UBE3D-201ENST00000237186 P0DMU3 169 aa11.83□□□□□ -0.52
UBE3D-201ENST00000237186 FAM231AP0DMU4 169 aa11.83□□□□□ -0.52
UBE3D-201ENST00000237186 FAM231CP0DMU5 169 aa11.83□□□□□ -0.52
UBE3D-201ENST00000237186 KRTAP1-1Q07627 177 aa11.83□□□□□ -0.52
UBE3D-201ENST00000237186 GAGE10A6NGK3 116 aa11.82□□□□□ -0.52
UBE3D-201ENST00000237186 C11orf86A6NJI1 115 aa11.82□□□□□ -0.52
UBE3D-201ENST00000237186 H3BUT2 72 aa11.82□□□□□ -0.52
UBE3D-201ENST00000237186 C20orf203Q8NBC4 194 aa11.82□□□□□ -0.52
UBE3D-201ENST00000237186 PHLDA1Q8WV24 401 aaPredicted RBP11.82□□□□□ -0.52
UBE3D-201ENST00000237186 PRADC1Q9BSG0 188 aa11.82□□□□□ -0.52
UBE3D-201ENST00000237186 TRBV7-3A0A075B6L6 115 aa11.81□□□□□ -0.52
UBE3D-201ENST00000237186 ZNF415Q09FC8 603 aa11.81□□□□□ -0.52
UBE3D-201ENST00000237186 GTF2H5Q6ZYL4 71 aa11.81□□□□□ -0.52
UBE3D-201ENST00000237186 A0A1W2PPM0 123 aa11.8□□□□□ -0.52
UBE3D-201ENST00000237186 SPXQ9BT56 116 aa11.8□□□□□ -0.52
UBE3D-201ENST00000237186 C16orf95Q9H693 158 aa11.8□□□□□ -0.52
UBE3D-201ENST00000237186 K7EP34 96 aa11.79□□□□□ -0.52
UBE3D-201ENST00000237186 CCL24O00175 119 aa11.79□□□□□ -0.52
UBE3D-201ENST00000237186 HTN1P15515 57 aa11.79□□□□□ -0.52
UBE3D-201ENST00000237186 BEAN1Q3B7T3 259 aa11.79□□□□□ -0.52
UBE3D-201ENST00000237186 NFE4Q86UQ8 179 aa11.79□□□□□ -0.52
UBE3D-201ENST00000237186 C11orf72Q8NBR9 251 aa11.79□□□□□ -0.52
UBE3D-201ENST00000237186 DEFB104AQ8WTQ1 72 aa11.79□□□□□ -0.52
UBE3D-201ENST00000237186 RAB37Q96AX2 223 aa11.79□□□□□ -0.52
UBE3D-201ENST00000237186 YAE1D1Q9NRH1 226 aa11.79□□□□□ -0.52
UBE3D-201ENST00000237186 HECTD1Q9ULT8 2610 aa11.79□□□□□ -0.52
UBE3D-201ENST00000237186 SONP18583 2426 aaKnown RBP11.79□□□□□ -0.52
UBE3D-201ENST00000237186 INSP01308 110 aa11.78□□□□□ -0.52
UBE3D-201ENST00000237186 HERVK_113P61574 105 aa11.78□□□□□ -0.52
UBE3D-201ENST00000237186 ODF3L2Q3SX64 289 aa11.78□□□□□ -0.52
UBE3D-201ENST00000237186 HIST1H4GQ99525 98 aa11.78□□□□□ -0.52
UBE3D-201ENST00000237186 GAGE12BA1L429 117 aa11.78□□□□□ -0.52
UBE3D-201ENST00000237186 RNASE1P07998 156 aaKnown RBP11.78□□□□□ -0.52
UBE3D-201ENST00000237186 CD28P10747 220 aa11.78□□□□□ -0.52
UBE3D-201ENST00000237186 ZNRF2Q8NHG8 242 aa11.78□□□□□ -0.52
UBE3D-201ENST00000237186 LINC01587Q99440 93 aa11.78□□□□□ -0.52
UBE3D-201ENST00000237186 PYGO1Q9Y3Y4 419 aa11.78□□□□□ -0.52
UBE3D-201ENST00000237186 FASNP49327 2511 aaKnown RBP11.78□□□□□ -0.52
UBE3D-201ENST00000237186 CFAP126Q5VTH2 177 aa11.77□□□□□ -0.53
UBE3D-201ENST00000237186 HIST2H2BDQ6DRA6 164 aa11.77□□□□□ -0.53
UBE3D-201ENST00000237186 RNASE8Q8TDE3 154 aaKnown RBP11.77□□□□□ -0.53
UBE3D-201ENST00000237186 A0A1B0GWB2 263 aa11.76□□□□□ -0.53
UBE3D-201ENST00000237186 SAMD5Q5TGI4 173 aa11.76□□□□□ -0.53
UBE3D-201ENST00000237186 NHP2Q9NX24 153 aaKnown RBP11.76□□□□□ -0.53
UBE3D-201ENST00000237186 TSSC4Q9Y5U2 329 aaPredicted RBP11.76□□□□□ -0.53
UBE3D-201ENST00000237186 ZNF815PA8K554 130 aa11.76□□□□□ -0.53
UBE3D-201ENST00000237186 RHODO00212 210 aa11.76□□□□□ -0.53
UBE3D-201ENST00000237186 PRM2P04554 102 aa11.76□□□□□ -0.53
UBE3D-201ENST00000237186 FABP2P12104 132 aa11.76□□□□□ -0.53
UBE3D-201ENST00000237186 CRYBA4P53673 196 aa11.76□□□□□ -0.53
UBE3D-201ENST00000237186 LINC01006Q8NI28 216 aa11.76□□□□□ -0.53
UBE3D-201ENST00000237186 ACANP16112 2415 aa11.75□□□□□ -0.53
UBE3D-201ENST00000237186 PROK1P58294 105 aa11.75□□□□□ -0.53
UBE3D-201ENST00000237186 C12orf74Q32Q52 190 aa11.75□□□□□ -0.53
UBE3D-201ENST00000237186 OR5A1Q8NGJ0 315 aa11.75□□□□□ -0.53
UBE3D-201ENST00000237186 NAA38Q9BRA0 125 aaKnown RBP11.75□□□□□ -0.53
UBE3D-201ENST00000237186 K7ERJ3 54 aa11.74□□□□□ -0.53
UBE3D-201ENST00000237186 EMP1P54849 157 aa11.74□□□□□ -0.53
UBE3D-201ENST00000237186 DNAJC30Q96LL9 226 aa11.74□□□□□ -0.53
UBE3D-201ENST00000237186 CITED2Q99967 270 aaPredicted RBP11.74□□□□□ -0.53
UBE3D-201ENST00000237186 TNFRSF18Q9Y5U5 241 aa11.74□□□□□ -0.53
UBE3D-201ENST00000237186 IGLV4-3A0A075B6K6 122 aa11.74□□□□□ -0.53
UBE3D-201ENST00000237186 IGHV3-73A0A0B4J1V6 119 aa11.74□□□□□ -0.53
UBE3D-201ENST00000237186 RS1O15537 224 aa11.74□□□□□ -0.53
UBE3D-201ENST00000237186 IGHV3-53P01767 116 aa11.74□□□□□ -0.53
UBE3D-201ENST00000237186 C11orf44Q8N8P7 122 aa11.74□□□□□ -0.53
UBE3D-201ENST00000237186 SPCS1Q9Y6A9 102 aa11.74□□□□□ -0.53
UBE3D-201ENST00000237186 SCGB2A2Q13296 93 aa11.73□□□□□ -0.53
UBE3D-201ENST00000237186 Q6ZSN1 163 aa11.73□□□□□ -0.53
UBE3D-201ENST00000237186 STHQ8IWL8 128 aa11.73□□□□□ -0.53
UBE3D-201ENST00000237186 OPRPNQ99935 248 aaPredicted RBP11.73□□□□□ -0.53
UBE3D-201ENST00000237186 CMC4P56277 68 aaPredicted RBP11.72□□□□□ -0.53
UBE3D-201ENST00000237186 TMEM170BQ5T4T1 132 aa11.72□□□□□ -0.53
UBE3D-201ENST00000237186 C1orf158Q8N1D5 194 aa11.72□□□□□ -0.53
UBE3D-201ENST00000237186 IL17DQ8TAD2 202 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 184.4 ms