RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 DIAPH2-AS1Q14236 149 aa6.35□□□□□ -1.39
APOB-201ENST00000233242 MRPL36Q9P0J6 103 aaKnown RBP6.35□□□□□ -1.39
APOB-201ENST00000233242 FRMD6-AS1P0C7T7 363 aa6.35□□□□□ -1.39
APOB-201ENST00000233242 CFHR3Q02985 330 aa6.35□□□□□ -1.39
APOB-201ENST00000233242 Q6Q795 121 aa6.35□□□□□ -1.39
APOB-201ENST00000233242 NEXN-AS1Q8NBZ9 246 aa6.34□□□□□ -1.39
APOB-201ENST00000233242 HOXB4P17483 251 aaPredicted RBP6.34□□□□□ -1.39
APOB-201ENST00000233242 SERP2Q8N6R1 65 aa6.34□□□□□ -1.39
APOB-201ENST00000233242 MLST8Q9BVC4 326 aa6.34□□□□□ -1.39
APOB-201ENST00000233242 IGHV7-81A0A0B4J1V7 117 aa6.34□□□□□ -1.39
APOB-201ENST00000233242 IGLV2-23P01705 113 aa6.34□□□□□ -1.39
APOB-201ENST00000233242 RUSC1-AS1Q66K80 236 aa6.34□□□□□ -1.39
APOB-201ENST00000233242 TRBV12-3P01733 135 aa6.34□□□□□ -1.39
APOB-201ENST00000233242 NOP10Q9NPE3 64 aaKnown RBP6.34□□□□□ -1.39
APOB-201ENST00000233242 C2orf16Q68DN1 1984 aa6.34□□□□□ -1.39
APOB-201ENST00000233242 ZFYVE26Q68DK2 2539 aa6.34□□□□□ -1.39
APOB-201ENST00000233242 C14orf132Q9NPU4 83 aa6.34□□□□□ -1.4
APOB-201ENST00000233242 LINC00574Q9H8X3 128 aa6.33□□□□□ -1.4
APOB-201ENST00000233242 HIVEP3Q5T1R4 2406 aa6.33□□□□□ -1.4
APOB-201ENST00000233242 TRBV10-1A0A0K0K1A3 114 aa6.33□□□□□ -1.4
APOB-201ENST00000233242 PROP1O75360 226 aa6.33□□□□□ -1.4
APOB-201ENST00000233242 HIGD2BQ4VC39 106 aa6.33□□□□□ -1.4
APOB-201ENST00000233242 MRPS36P82909 103 aaKnown RBP6.33□□□□□ -1.4
APOB-201ENST00000233242 GDF5OSQ5U4N7 250 aa6.33□□□□□ -1.4
APOB-201ENST00000233242 PKD1L2Q7Z442 2459 aa6.33□□□□□ -1.4
APOB-201ENST00000233242 LY6G6EA0A0G2JKS1 128 aa6.33□□□□□ -1.4
APOB-201ENST00000233242 LY6HO94772 140 aa6.33□□□□□ -1.4
APOB-201ENST00000233242 U3KQA8 63 aa6.33□□□□□ -1.4
APOB-201ENST00000233242 ODF3Q96PU9 254 aa6.33□□□□□ -1.4
APOB-201ENST00000233242 DAND5Q8N907 189 aa6.33□□□□□ -1.4
APOB-201ENST00000233242 NDUFA1O15239 70 aa6.32□□□□□ -1.4
APOB-201ENST00000233242 DIRC1Q969H9 104 aa6.32□□□□□ -1.4
APOB-201ENST00000233242 ZNF106Q9H2Y7 1883 aaKnown RBP6.32□□□□□ -1.4
APOB-201ENST00000233242 C3orf56Q8N813 242 aa6.32□□□□□ -1.4
APOB-201ENST00000233242 USP9XQ93008 2570 aaPredicted RBP6.32□□□□□ -1.4
APOB-201ENST00000233242 CFAP126Q5VTH2 177 aa6.32□□□□□ -1.4
APOB-201ENST00000233242 C5orf38Q86SI9 138 aa6.32□□□□□ -1.4
APOB-201ENST00000233242 FANCD2OSQ96PS1 177 aa6.32□□□□□ -1.4
APOB-201ENST00000233242 TIMM17BO60830 172 aa6.32□□□□□ -1.4
APOB-201ENST00000233242 NDUFS5O43920 106 aa6.32□□□□□ -1.4
APOB-201ENST00000233242 FAM215AQ9Y5M1 114 aa6.32□□□□□ -1.4
APOB-201ENST00000233242 SVIPQ8NHG7 77 aa6.32□□□□□ -1.4
APOB-201ENST00000233242 C10orf105Q8TEF2 133 aa6.32□□□□□ -1.4
APOB-201ENST00000233242 NFE4Q86UQ8 179 aa6.31□□□□□ -1.4
APOB-201ENST00000233242 C20orf197Q8N268 126 aa6.31□□□□□ -1.4
APOB-201ENST00000233242 CENPVL3A0A0U1RRI6 287 aa6.31□□□□□ -1.4
APOB-201ENST00000233242 PIEZO2Q9H5I5 2752 aa6.31□□□□□ -1.4
APOB-201ENST00000233242 LYRM9A8MSI8 78 aa6.31□□□□□ -1.4
APOB-201ENST00000233242 VPREB3Q9UKI3 123 aa6.31□□□□□ -1.4
APOB-201ENST00000233242 KIF26AQ9ULI4 1882 aaPredicted RBP6.31□□□□□ -1.4
APOB-201ENST00000233242 CAMK2N2Q96S95 79 aa6.31□□□□□ -1.4
APOB-201ENST00000233242 A0A0J9YY99 117 aa6.31□□□□□ -1.4
APOB-201ENST00000233242 GPHB5Q86YW7 130 aa6.31□□□□□ -1.4
APOB-201ENST00000233242 CTSZQ9UBR2 303 aa6.31□□□□□ -1.4
APOB-201ENST00000233242 MIR7-3HGQ8N6C7 128 aa6.31□□□□□ -1.4
APOB-201ENST00000233242 TMEM89A2RUT3 159 aa6.3□□□□□ -1.4
APOB-201ENST00000233242 C2orf91Q6ZV80 131 aa6.3□□□□□ -1.4
APOB-201ENST00000233242 PRR30Q53SZ7 412 aaPredicted RBP6.3□□□□□ -1.4
APOB-201ENST00000233242 UBE2BP63146 152 aa6.3□□□□□ -1.4
APOB-201ENST00000233242 TP53TG3Q9ULZ0 132 aa6.3□□□□□ -1.4
APOB-201ENST00000233242 COX7CP15954 63 aa6.3□□□□□ -1.4
APOB-201ENST00000233242 LOXL1Q08397 574 aaPredicted RBP6.3□□□□□ -1.4
APOB-201ENST00000233242 IGKV1D-37A0A075B6S9 117 aa6.3□□□□□ -1.4
APOB-201ENST00000233242 PRSS33Q8NF86 280 aa6.3□□□□□ -1.4
APOB-201ENST00000233242 SPRY4Q9C004 299 aa6.3□□□□□ -1.4
APOB-201ENST00000233242 DSCAMO60469 2012 aa6.3□□□□□ -1.4
APOB-201ENST00000233242 TRAV23DV6A0A075B6W5 121 aa6.3□□□□□ -1.4
APOB-201ENST00000233242 IGHV3-33P01772 117 aa6.3□□□□□ -1.4
APOB-201ENST00000233242 GYPEP15421 78 aa6.3□□□□□ -1.4
APOB-201ENST00000233242 KIAA1671Q9BY89 1806 aa6.29□□□□□ -1.4
APOB-201ENST00000233242 BPY2O14599 106 aa6.29□□□□□ -1.4
APOB-201ENST00000233242 RPL18AQ02543 176 aaKnown RBP6.29□□□□□ -1.4
APOB-201ENST00000233242 C20orf173Q96LM9 149 aa6.29□□□□□ -1.4
APOB-201ENST00000233242 WDR87Q6ZQQ6 2873 aa6.29□□□□□ -1.4
APOB-201ENST00000233242 ZNF295-AS1Q8N0V1 137 aa6.29□□□□□ -1.4
APOB-201ENST00000233242 TRIAP1O43715 76 aa6.29□□□□□ -1.4
APOB-201ENST00000233242 ODF3L1Q8IXM7 274 aa6.29□□□□□ -1.4
APOB-201ENST00000233242 H7C423 109 aa6.29□□□□□ -1.4
APOB-201ENST00000233242 FAM222AQ5U5X8 452 aa6.29□□□□□ -1.4
APOB-201ENST00000233242 PRAC2D3DTV9 90 aa6.29□□□□□ -1.4
APOB-201ENST00000233242 COX7BP24311 80 aa6.29□□□□□ -1.4
APOB-201ENST00000233242 UFSP1Q6NVU6 142 aa6.29□□□□□ -1.4
APOB-201ENST00000233242 DEFB105AQ8NG35 78 aa6.28□□□□□ -1.4
APOB-201ENST00000233242 CLPSL2Q6UWE3 100 aa6.28□□□□□ -1.4
APOB-201ENST00000233242 WT1P19544 449 aaPredicted RBP6.28□□□□□ -1.4
APOB-201ENST00000233242 SDIM1Q6ZPB5 146 aa6.28□□□□□ -1.4
APOB-201ENST00000233242 TMEM223A0PJW6 202 aa6.28□□□□□ -1.4
APOB-201ENST00000233242 IGLV1-47P01700 117 aa6.28□□□□□ -1.4
APOB-201ENST00000233242 LINC00322Q6ZN03 302 aaPredicted RBP6.28□□□□□ -1.4
APOB-201ENST00000233242 IGHV3-30P01768 117 aa6.28□□□□□ -1.4
APOB-201ENST00000233242 IGHV3-30-5P0DP03 117 aa6.28□□□□□ -1.4
APOB-201ENST00000233242 THSD7BQ9C0I4 1608 aa6.28□□□□□ -1.4
APOB-201ENST00000233242 Q9HAA7 133 aa6.28□□□□□ -1.4
APOB-201ENST00000233242 IBA57-AS1B1ANH7 110 aa6.28□□□□□ -1.4
APOB-201ENST00000233242 ATG2AQ2TAZ0 1938 aa6.28□□□□□ -1.4
APOB-201ENST00000233242 FAM110AQ9BQ89 295 aa6.27□□□□□ -1.41
APOB-201ENST00000233242 USP9YO00507 2555 aaPredicted RBP6.27□□□□□ -1.41
APOB-201ENST00000233242 AJUBAQ96IF1 538 aa6.27□□□□□ -1.41
APOB-201ENST00000233242 ZNF22P17026 224 aaPredicted RBP6.27□□□□□ -1.41
APOB-201ENST00000233242 C5orf56Q8N8D9 126 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms