RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 DAND5Q8N907 189 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 C17orf77Q96MU5 243 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 C19orf73Q9NVV2 129 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 CSMD2Q7Z408 3487 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 ARHGAP32A7KAX9 2087 aa4.32□□□□□ -1.72
RFX4-201ENST00000229387 ANKHD1Q8IWZ3 2542 aaKnown RBP4.32□□□□□ -1.72
RFX4-201ENST00000229387 SRRM5B3KS81 715 aa4.31□□□□□ -1.72
RFX4-201ENST00000229387 NDUFA3O95167 84 aa4.31□□□□□ -1.72
RFX4-201ENST00000229387 IGLV1-44P01699 117 aa4.31□□□□□ -1.72
RFX4-201ENST00000229387 TCRAP04437 139 aa4.31□□□□□ -1.72
RFX4-201ENST00000229387 SRSF12Q8WXF0 261 aaKnown RBP4.31□□□□□ -1.72
RFX4-201ENST00000229387 IGLV2-18A0A075B6J9 118 aa4.31□□□□□ -1.72
RFX4-201ENST00000229387 DSCAMO60469 2012 aa4.31□□□□□ -1.72
RFX4-201ENST00000229387 IGKV1OR2-108A0A075B7D4 117 aa4.31□□□□□ -1.72
RFX4-201ENST00000229387 TMEM223A0PJW6 202 aa4.31□□□□□ -1.72
RFX4-201ENST00000229387 COX7A2P2O60397 106 aa4.31□□□□□ -1.72
RFX4-201ENST00000229387 CFHR3Q02985 330 aa4.31□□□□□ -1.72
RFX4-201ENST00000229387 RNF7Q9UBF6 113 aa4.31□□□□□ -1.72
RFX4-201ENST00000229387 TRBV7-6A0A0J9YX20 115 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 IGHG2P01859 326 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 C17orf58Q2M2W7 97 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 TET2Q6N021 2002 aaPredicted RBP4.3□□□□□ -1.72
RFX4-201ENST00000229387 LINC01356Q8N9X3 169 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 TMEM243Q9BU79 118 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 ZFYVE26Q68DK2 2539 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 E7EUB6 86 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 LST1O00453 97 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 IGLV2-11P01706 119 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 IGHV4-39P01824 125 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 NSUN5P1Q3KNT7 163 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 MORN5Q5VZ52 161 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 ZFHX3Q15911 3703 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 LCE2BO14633 110 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 C10orf113Q5VZT2 155 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 TIMM21Q9BVV7 248 aa4.3□□□□□ -1.72
RFX4-201ENST00000229387 DAZ1Q9NQZ3 744 aaKnown RBP4.3□□□□□ -1.72
RFX4-201ENST00000229387 TRIAP1O43715 76 aa4.29□□□□□ -1.72
RFX4-201ENST00000229387 COX6CP09669 75 aa4.29□□□□□ -1.72
RFX4-201ENST00000229387 COX7A1P24310 79 aa4.29□□□□□ -1.72
RFX4-201ENST00000229387 ERHP84090 104 aaKnown RBP4.29□□□□□ -1.72
RFX4-201ENST00000229387 LAGE3Q14657 143 aa4.29□□□□□ -1.72
RFX4-201ENST00000229387 Q6JHZ5 121 aa4.29□□□□□ -1.72
RFX4-201ENST00000229387 RNF185Q96GF1 192 aa4.29□□□□□ -1.72
RFX4-201ENST00000229387 CACNA1AO00555 2505 aa4.29□□□□□ -1.72
RFX4-201ENST00000229387 ATP5EP56381 51 aaPredicted RBP4.29□□□□□ -1.72
RFX4-201ENST00000229387 RHOHQ15669 191 aa4.29□□□□□ -1.72
RFX4-201ENST00000229387 LYZL1Q6UWQ5 148 aa4.29□□□□□ -1.72
RFX4-201ENST00000229387 TMEM75Q8N9X5 138 aa4.29□□□□□ -1.72
RFX4-201ENST00000229387 GAFA1Q96PS6 74 aa4.29□□□□□ -1.72
RFX4-201ENST00000229387 SLC50A1Q9BRV3 221 aa4.29□□□□□ -1.72
RFX4-201ENST00000229387 S4R3C0 116 aa4.29□□□□□ -1.72
RFX4-201ENST00000229387 BCE1O60756 84 aa4.28□□□□□ -1.72
RFX4-201ENST00000229387 C2orf83Q53S99 150 aa4.28□□□□□ -1.72
RFX4-201ENST00000229387 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
RFX4-201ENST00000229387 HCP5Q6MZN7 132 aa4.28□□□□□ -1.72
RFX4-201ENST00000229387 TMEM14BQ9NUH8 114 aa4.28□□□□□ -1.72
RFX4-201ENST00000229387 VPS13CQ709C8 3753 aa4.28□□□□□ -1.72
RFX4-201ENST00000229387 CNFNQ9BYD5 112 aa4.28□□□□□ -1.72
RFX4-201ENST00000229387 PLAC8L1A1L4L8 177 aa4.28□□□□□ -1.72
RFX4-201ENST00000229387 H7BZZ5 65 aa4.28□□□□□ -1.72
RFX4-201ENST00000229387 RUSC1-AS1Q66K80 236 aa4.28□□□□□ -1.72
RFX4-201ENST00000229387 PATE2Q6UY27 113 aa4.28□□□□□ -1.72
RFX4-201ENST00000229387 SAA1P0DJI8 122 aaPredicted RBP4.27□□□□□ -1.73
RFX4-201ENST00000229387 SUMO2P61956 95 aaKnown RBP4.27□□□□□ -1.73
RFX4-201ENST00000229387 ORMDL2Q53FV1 153 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 COX8CQ7Z4L0 72 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 DAZ4Q86SG3 579 aaKnown RBP4.27□□□□□ -1.73
RFX4-201ENST00000229387 THAP8Q8NA92 274 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 RNASE6Q93091 150 aaKnown RBP4.27□□□□□ -1.73
RFX4-201ENST00000229387 EEF1AKMT3Q96AZ1 226 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 CTSZQ9UBR2 303 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 SMKR1H3BMG3 65 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 CCL21O00585 134 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 LHBP01229 141 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 VSIG2Q96IQ7 327 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 ICOSQ9Y6W8 199 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 CRYBG3Q68DQ2 2970 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 CENPEQ02224 2701 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 IGLV3-9A0A075B6K5 115 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 E7EQL1 145 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 LYPD5Q6UWN5 251 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 IGFL3Q6UXB1 125 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 AMELXQ99217 191 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 Q9H3A6 140 aa4.27□□□□□ -1.73
RFX4-201ENST00000229387 XCL1P47992 114 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 CRIP1P50238 77 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 LINC00305Q7Z4B0 112 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 MRPL55Q7Z7F7 128 aaKnown RBP4.26□□□□□ -1.73
RFX4-201ENST00000229387 FAM223AQ8IWN6 122 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 TOMM6Q96B49 74 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 XCL2Q9UBD3 114 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 IGHV3OR16-8A0A075B7F1 116 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 FAM223BA6NKX1 122 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 CCKP06307 115 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 INAFM2P0DMQ5 153 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 RNASE2P10153 161 aaKnown RBP4.26□□□□□ -1.73
RFX4-201ENST00000229387 Q1RN00 199 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 PRNTQ86SH4 94 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 ZNF491Q8N8L2 437 aa4.26□□□□□ -1.73
RFX4-201ENST00000229387 MRPL36Q9P0J6 103 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms