RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 HAMPP81172 84 aa8.82□□□□□ -1
NOD1-201ENST00000222823 IGKV2D-24A0A075B6R9 120 aa8.82□□□□□ -1
NOD1-201ENST00000222823 CCL25O15444 150 aa8.82□□□□□ -1
NOD1-201ENST00000222823 TRBV12-3P01733 135 aa8.82□□□□□ -1
NOD1-201ENST00000222823 ZMAT4Q9H898 229 aa8.82□□□□□ -1
NOD1-201ENST00000222823 ATP5G1P05496 136 aa8.82□□□□□ -1
NOD1-201ENST00000222823 SPART-AS1P0CW21 52 aa8.82□□□□□ -1
NOD1-201ENST00000222823 MRAPQ8TCY5 172 aa8.82□□□□□ -1
NOD1-201ENST00000222823 TRAV25A0A0B4J276 109 aa8.81□□□□□ -1
NOD1-201ENST00000222823 A6NDX4 124 aa8.81□□□□□ -1
NOD1-201ENST00000222823 IGLV2-8P01709 118 aa8.81□□□□□ -1
NOD1-201ENST00000222823 MRPL23Q16540 153 aaKnown RBP8.81□□□□□ -1
NOD1-201ENST00000222823 C19orf71A6NCJ1 209 aa8.81□□□□□ -1
NOD1-201ENST00000222823 RPL39P62891 51 aaKnown RBP8.81□□□□□ -1
NOD1-201ENST00000222823 NTN5Q8WTR8 489 aaPredicted RBP8.81□□□□□ -1
NOD1-201ENST00000222823 TRBV6-1A0A0K0K1D8 114 aa8.8□□□□□ -1
NOD1-201ENST00000222823 HERV-K104P63124 156 aa8.8□□□□□ -1
NOD1-201ENST00000222823 DAZ2Q13117 558 aaKnown RBP8.8□□□□□ -1
NOD1-201ENST00000222823 DAZ4Q86SG3 579 aaKnown RBP8.8□□□□□ -1
NOD1-201ENST00000222823 DAZ3Q9NR90 486 aaKnown RBP8.8□□□□□ -1
NOD1-201ENST00000222823 K7EQD1 137 aa8.8□□□□□ -1
NOD1-201ENST00000222823 TNFRSF13BO14836 293 aaPredicted RBP8.8□□□□□ -1
NOD1-201ENST00000222823 C1orf43Q9BWL3 253 aa8.8□□□□□ -1
NOD1-201ENST00000222823 TTTY13Q9BZ97 58 aa8.8□□□□□ -1
NOD1-201ENST00000222823 Q9HAA7 133 aa8.8□□□□□ -1
NOD1-201ENST00000222823 LINC01548A6NM66 108 aa8.8□□□□□ -1
NOD1-201ENST00000222823 MED14OSP0DP75 135 aa8.8□□□□□ -1
NOD1-201ENST00000222823 PKD1L2Q7Z442 2459 aa8.79□□□□□ -1
NOD1-201ENST00000222823 ODF3BA8MYP8 253 aa8.79□□□□□ -1
NOD1-201ENST00000222823 IFITM1P13164 125 aa8.79□□□□□ -1
NOD1-201ENST00000222823 ESM1Q9NQ30 184 aa8.79□□□□□ -1
NOD1-201ENST00000222823 IGLV10-54A0A075B6I4 117 aa8.79□□□□□ -1
NOD1-201ENST00000222823 A0A0J9YX75 114 aa8.79□□□□□ -1
NOD1-201ENST00000222823 TRBV7-3A0A075B6L6 115 aa8.79□□□□□ -1
NOD1-201ENST00000222823 TRAV4A0A0B4J268 109 aa8.79□□□□□ -1
NOD1-201ENST00000222823 PRSS47A8MTI9 375 aa8.79□□□□□ -1
NOD1-201ENST00000222823 MYCNOSP40205 109 aa8.79□□□□□ -1
NOD1-201ENST00000222823 ZNF462Q96JM2 2506 aa8.78□□□□□ -1
NOD1-201ENST00000222823 CCDC140Q96MF4 163 aa8.78□□□□□ -1
NOD1-201ENST00000222823 SPTBN4Q9H254 2564 aa8.78□□□□□ -1
NOD1-201ENST00000222823 A4D1N5 150 aa8.78□□□□□ -1
NOD1-201ENST00000222823 C19orf84I3L1E1 186 aa8.78□□□□□ -1
NOD1-201ENST00000222823 DSCR8Q96T75 97 aa8.78□□□□□ -1
NOD1-201ENST00000222823 CITED2Q99967 270 aaPredicted RBP8.78□□□□□ -1
NOD1-201ENST00000222823 MDFICQ9P1T7 246 aa8.78□□□□□ -1
NOD1-201ENST00000222823 TINCRA0A1B0GVN0 87 aa8.78□□□□□ -1
NOD1-201ENST00000222823 LOXL1Q08397 574 aaPredicted RBP8.78□□□□□ -1
NOD1-201ENST00000222823 PRRC2AP48634 2157 aaKnown RBP8.78□□□□□ -1
NOD1-201ENST00000222823 GAGE12HA6NDE8 117 aa8.77□□□□□ -1.01
NOD1-201ENST00000222823 RPL32P62910 135 aaKnown RBP8.77□□□□□ -1.01
NOD1-201ENST00000222823 TIMM17AQ99595 171 aa8.77□□□□□ -1.01
NOD1-201ENST00000222823 CLPSL1A2RUU4 121 aa8.77□□□□□ -1.01
NOD1-201ENST00000222823 IGLL5B9A064 214 aa8.77□□□□□ -1.01
NOD1-201ENST00000222823 LINC00322Q6ZN03 302 aaPredicted RBP8.77□□□□□ -1.01
NOD1-201ENST00000222823 TRAV12-1A0A0B4J245 112 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 IGHG4P01861 327 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 HIST2H2BCQ6DN03 193 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 ICOSQ9Y6W8 199 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 FSTL3O95633 263 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 ZNF80P51504 273 aaPredicted RBP8.76□□□□□ -1.01
NOD1-201ENST00000222823 SH2D6Q7Z4S9 175 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 MBD6Q96DN6 1003 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 SND1-IT1Q9HBX3 110 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 TEX48A0A1B0GUV7 120 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 COX7A2LO14548 114 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 MUSTN1Q8IVN3 82 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 TANC2Q9HCD6 1990 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 BAALC-AS2P0C853 105 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 C9orf153Q5TBE3 101 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 HHLA3Q9XRX5 114 aa8.76□□□□□ -1.01
NOD1-201ENST00000222823 LRRK2Q5S007 2527 aa8.75□□□□□ -1.01
NOD1-201ENST00000222823 FXYD2P54710 66 aa8.75□□□□□ -1.01
NOD1-201ENST00000222823 C4orf3Q8WVX3 66 aa8.75□□□□□ -1.01
NOD1-201ENST00000222823 BAALCQ8WXS3 180 aa8.75□□□□□ -1.01
NOD1-201ENST00000222823 CAMK2N2Q96S95 79 aa8.75□□□□□ -1.01
NOD1-201ENST00000222823 RBMY1FQ15415 496 aaKnown RBP8.75□□□□□ -1.01
NOD1-201ENST00000222823 DEFB135Q30KP9 77 aa8.75□□□□□ -1.01
NOD1-201ENST00000222823 MLST8Q9BVC4 326 aa8.75□□□□□ -1.01
NOD1-201ENST00000222823 TP53TG3Q9ULZ0 132 aa8.75□□□□□ -1.01
NOD1-201ENST00000222823 IGF1P05019 195 aa8.75□□□□□ -1.01
NOD1-201ENST00000222823 TOMM6Q96B49 74 aa8.75□□□□□ -1.01
NOD1-201ENST00000222823 ARHGAP32A7KAX9 2087 aa8.75□□□□□ -1.01
NOD1-201ENST00000222823 A0A1B0GXF2 115 aa8.74□□□□□ -1.01
NOD1-201ENST00000222823 C11orf86A6NJI1 115 aa8.74□□□□□ -1.01
NOD1-201ENST00000222823 E9PLD3 99 aa8.74□□□□□ -1.01
NOD1-201ENST00000222823 ODF1Q14990 250 aa8.74□□□□□ -1.01
NOD1-201ENST00000222823 C20orf203Q8NBC4 194 aa8.74□□□□□ -1.01
NOD1-201ENST00000222823 CRYGBP07316 175 aa8.74□□□□□ -1.01
NOD1-201ENST00000222823 CCL18P55774 89 aa8.74□□□□□ -1.01
NOD1-201ENST00000222823 UBE2BP63146 152 aa8.74□□□□□ -1.01
NOD1-201ENST00000222823 PRORYQ9H606 182 aa8.74□□□□□ -1.01
NOD1-201ENST00000222823 HIGD1BQ9P298 99 aa8.74□□□□□ -1.01
NOD1-201ENST00000222823 FASNP49327 2511 aaKnown RBP8.73□□□□□ -1.01
NOD1-201ENST00000222823 IGHV3-30P01768 117 aa8.73□□□□□ -1.01
NOD1-201ENST00000222823 IGHV3-33P01772 117 aa8.73□□□□□ -1.01
NOD1-201ENST00000222823 IGHV3-30-3P0DP02 117 aa8.73□□□□□ -1.01
NOD1-201ENST00000222823 IGHV3-30-5P0DP03 117 aa8.73□□□□□ -1.01
NOD1-201ENST00000222823 CDH23Q9H251 3354 aa8.73□□□□□ -1.01
NOD1-201ENST00000222823 DEFB4AO15263 64 aa8.73□□□□□ -1.01
NOD1-201ENST00000222823 EBI3Q14213 229 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms