RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 Q9UF83 564 aa11.43□□□□□ -0.58
LIM2-201ENST00000221973 KIAA1109Q2LD37 5005 aa11.42□□□□□ -0.58
LIM2-201ENST00000221973 TGIF2-C20orf24A0A0A6YYL0 155 aa11.42□□□□□ -0.58
LIM2-201ENST00000221973 TRAV26-2A0A0B4J265 109 aa11.42□□□□□ -0.58
LIM2-201ENST00000221973 FAM104BQ5XKR9 115 aa11.42□□□□□ -0.58
LIM2-201ENST00000221973 GATD1Q8NB37 220 aa11.42□□□□□ -0.58
LIM2-201ENST00000221973 DNAH2Q9P225 4427 aa11.41□□□□□ -0.58
LIM2-201ENST00000221973 FAT2Q9NYQ8 4349 aa11.41□□□□□ -0.58
LIM2-201ENST00000221973 NACAE9PAV3 2078 aa11.41□□□□□ -0.58
LIM2-201ENST00000221973 H3BNG1 76 aa11.41□□□□□ -0.58
LIM2-201ENST00000221973 M0QY20 66 aa11.41□□□□□ -0.58
LIM2-201ENST00000221973 SCO1O75880 301 aa11.41□□□□□ -0.58
LIM2-201ENST00000221973 RASL11AQ6T310 242 aa11.41□□□□□ -0.58
LIM2-201ENST00000221973 ICOSQ9Y6W8 199 aa11.41□□□□□ -0.58
LIM2-201ENST00000221973 GAGE12JA6NER3 117 aa11.4□□□□□ -0.58
LIM2-201ENST00000221973 H7C1H1 209 aa11.4□□□□□ -0.58
LIM2-201ENST00000221973 GAGE1Q13065 139 aa11.4□□□□□ -0.58
LIM2-201ENST00000221973 GAGE4Q13068 117 aa11.4□□□□□ -0.58
LIM2-201ENST00000221973 GAGE5Q13069 117 aa11.4□□□□□ -0.58
LIM2-201ENST00000221973 GAGE13Q4V321 117 aa11.4□□□□□ -0.58
LIM2-201ENST00000221973 C15orf53Q8NAA6 179 aa11.4□□□□□ -0.58
LIM2-201ENST00000221973 APLNQ9ULZ1 77 aa11.4□□□□□ -0.58
LIM2-201ENST00000221973 TRBV24-1A0A075B6N3 115 aa11.39□□□□□ -0.59
LIM2-201ENST00000221973 A0A096LPF7 62 aa11.39□□□□□ -0.59
LIM2-201ENST00000221973 MRPL23Q16540 153 aaKnown RBP11.39□□□□□ -0.59
LIM2-201ENST00000221973 MRPL51Q4U2R6 128 aaKnown RBP11.39□□□□□ -0.59
LIM2-201ENST00000221973 TMEM136Q6ZRR5 245 aa11.39□□□□□ -0.59
LIM2-201ENST00000221973 NEXN-AS1Q8NBZ9 246 aa11.39□□□□□ -0.59
LIM2-201ENST00000221973 YPEL4Q96NS1 127 aa11.39□□□□□ -0.59
LIM2-201ENST00000221973 TRBV10-1A0A0K0K1A3 114 aa11.38□□□□□ -0.59
LIM2-201ENST00000221973 SMKR1H3BMG3 65 aa11.38□□□□□ -0.59
LIM2-201ENST00000221973 GAS8-AS1O95177 125 aa11.38□□□□□ -0.59
LIM2-201ENST00000221973 NCR2O95944 276 aa11.38□□□□□ -0.59
LIM2-201ENST00000221973 SRIP30626 198 aa11.38□□□□□ -0.59
LIM2-201ENST00000221973 ZNRF2Q8NHG8 242 aa11.38□□□□□ -0.59
LIM2-201ENST00000221973 MRAP2Q96G30 205 aa11.38□□□□□ -0.59
LIM2-201ENST00000221973 TCTAP57738 103 aa11.37□□□□□ -0.59
LIM2-201ENST00000221973 RPL36AP83881 106 aaKnown RBP11.37□□□□□ -0.59
LIM2-201ENST00000221973 RPL36ALQ969Q0 106 aaKnown RBP11.37□□□□□ -0.59
LIM2-201ENST00000221973 RPL39LQ96EH5 51 aaKnown RBP11.37□□□□□ -0.59
LIM2-201ENST00000221973 DNAH17Q9UFH2 4485 aa11.37□□□□□ -0.59
LIM2-201ENST00000221973 PCLOQ9Y6V0 5065 aa11.36□□□□□ -0.59
LIM2-201ENST00000221973 PKHD1P08F94 4074 aa11.36□□□□□ -0.59
LIM2-201ENST00000221973 CKS2P33552 79 aa11.36□□□□□ -0.59
LIM2-201ENST00000221973 COX19Q49B96 90 aa11.36□□□□□ -0.59
LIM2-201ENST00000221973 FRZBQ92765 325 aa11.36□□□□□ -0.59
LIM2-201ENST00000221973 GNB1LQ9BYB4 327 aa11.36□□□□□ -0.59
LIM2-201ENST00000221973 NIT2Q9NQR4 276 aa11.36□□□□□ -0.59
LIM2-201ENST00000221973 TNFRSF18Q9Y5U5 241 aa11.36□□□□□ -0.59
LIM2-201ENST00000221973 TRBV7-3A0A075B6L6 115 aa11.35□□□□□ -0.59
LIM2-201ENST00000221973 D6R8Y8 96 aa11.35□□□□□ -0.59
LIM2-201ENST00000221973 HLA-DQA1P01909 254 aa11.35□□□□□ -0.59
LIM2-201ENST00000221973 RPS10P46783 165 aaKnown RBP11.35□□□□□ -0.59
LIM2-201ENST00000221973 OR10J3Q5JRS4 329 aa11.35□□□□□ -0.59
LIM2-201ENST00000221973 NEGR1Q7Z3B1 354 aa11.35□□□□□ -0.59
LIM2-201ENST00000221973 DNAJC30Q96LL9 226 aa11.35□□□□□ -0.59
LIM2-201ENST00000221973 APCSP02743 223 aa11.34□□□□□ -0.59
LIM2-201ENST00000221973 LINC00694P0DN24 101 aa11.34□□□□□ -0.59
LIM2-201ENST00000221973 ATP6V0E2Q8NHE4 81 aa11.34□□□□□ -0.59
LIM2-201ENST00000221973 IGHV3-38A0A0C4DH36 116 aa11.33□□□□□ -0.6
LIM2-201ENST00000221973 MT-ND6P03923 174 aa11.33□□□□□ -0.6
LIM2-201ENST00000221973 UBE2D3P61077 147 aa11.33□□□□□ -0.6
LIM2-201ENST00000221973 UBE2D2P62837 147 aa11.33□□□□□ -0.6
LIM2-201ENST00000221973 KIAA1644Q3SXP7 199 aa11.33□□□□□ -0.6
LIM2-201ENST00000221973 SH2D6Q7Z4S9 175 aa11.33□□□□□ -0.6
LIM2-201ENST00000221973 MRPL18Q9H0U6 180 aaKnown RBP11.33□□□□□ -0.6
LIM2-201ENST00000221973 PPBPP02775 128 aa11.32□□□□□ -0.6
LIM2-201ENST00000221973 FABP9Q0Z7S8 132 aa11.32□□□□□ -0.6
LIM2-201ENST00000221973 ORMDL3Q8N138 153 aa11.32□□□□□ -0.6
LIM2-201ENST00000221973 NRACQ8N912 160 aa11.32□□□□□ -0.6
LIM2-201ENST00000221973 TRAPPC1Q9Y5R8 145 aa11.32□□□□□ -0.6
LIM2-201ENST00000221973 COLCA2A8K830 154 aa11.31□□□□□ -0.6
LIM2-201ENST00000221973 ESRGQ1W209 222 aa11.31□□□□□ -0.6
LIM2-201ENST00000221973 LYPD5Q6UWN5 251 aa11.31□□□□□ -0.6
LIM2-201ENST00000221973 PRELID3AQ96N28 172 aa11.31□□□□□ -0.6
LIM2-201ENST00000221973 ST20Q9HBF5 79 aa11.31□□□□□ -0.6
LIM2-201ENST00000221973 TRBV6-5A0A0K0K1A5 114 aa11.3□□□□□ -0.6
LIM2-201ENST00000221973 TNFRSF6BO95407 300 aa11.3□□□□□ -0.6
LIM2-201ENST00000221973 PPP1R17O96001 155 aa11.3□□□□□ -0.6
LIM2-201ENST00000221973 NPYP01303 97 aa11.3□□□□□ -0.6
LIM2-201ENST00000221973 CCL18P55774 89 aa11.3□□□□□ -0.6
LIM2-201ENST00000221973 DEFB104AQ8WTQ1 72 aa11.3□□□□□ -0.6
LIM2-201ENST00000221973 SDHAF1A6NFY7 115 aa11.29□□□□□ -0.6
LIM2-201ENST00000221973 DAZ4Q86SG3 579 aaKnown RBP11.29□□□□□ -0.6
LIM2-201ENST00000221973 UBE2DNLQ8IWF7 75 aa11.29□□□□□ -0.6
LIM2-201ENST00000221973 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.29□□□□□ -0.6
LIM2-201ENST00000221973 GTSF1LQ9H1H1 148 aa11.29□□□□□ -0.6
LIM2-201ENST00000221973 DAZ3Q9NR90 486 aaKnown RBP11.29□□□□□ -0.6
LIM2-201ENST00000221973 DYNC1H1Q14204 4646 aaKnown RBP11.29□□□□□ -0.6
LIM2-201ENST00000221973 PKD1P98161 4303 aa11.28□□□□□ -0.6
LIM2-201ENST00000221973 SUMO2P61956 95 aaKnown RBP11.28□□□□□ -0.6
LIM2-201ENST00000221973 TMEM70Q9BUB7 260 aa11.28□□□□□ -0.6
LIM2-201ENST00000221973 LINC00588Q9Y4M8 146 aa11.28□□□□□ -0.6
LIM2-201ENST00000221973 PHOX2AO14813 284 aa11.27□□□□□ -0.61
LIM2-201ENST00000221973 RAB5AP20339 215 aa11.27□□□□□ -0.61
LIM2-201ENST00000221973 PMCHP20382 165 aa11.27□□□□□ -0.61
LIM2-201ENST00000221973 C20orf78Q9BR46 151 aa11.27□□□□□ -0.61
LIM2-201ENST00000221973 DNAH11Q96DT5 4516 aa11.27□□□□□ -0.61
LIM2-201ENST00000221973 RYR1P21817 5038 aa11.26□□□□□ -0.61
LIM2-201ENST00000221973 POLR2KP53803 58 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms