RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 A0A1B0GX51 115 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 FAM222AQ5U5X8 452 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 HIST2H2BCQ6DN03 193 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 HIST2H2BDQ6DRA6 164 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 SMIM9A6NGZ8 99 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 GNRH2O43555 120 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 Q8N9W7 124 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 V9GYY9 64 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 NDUFA1O15239 70 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 TDRG1Q3Y452 100 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 C17orf77Q96MU5 243 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 PYGO1Q9Y3Y4 419 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 IGKV1OR2-108A0A075B7D4 117 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 NDUFB1O75438 58 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 C20orf203Q8NBC4 194 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 PRSS33Q8NF86 280 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 ZNF625Q96I27 306 aaPredicted RBP3.39□□□□□ -1.87
CHD9-201ENST00000219084 B5MCH6 92 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 M0QXV9 152 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 NUPR1O60356 82 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 NOP10Q9NPE3 64 aaKnown RBP3.39□□□□□ -1.87
CHD9-201ENST00000219084 IGKV1D-37A0A075B6S9 117 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 UBE2BP63146 152 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 RNASE8Q8TDE3 154 aaKnown RBP3.39□□□□□ -1.87
CHD9-201ENST00000219084 SPRY4Q9C004 299 aa3.39□□□□□ -1.87
CHD9-201ENST00000219084 IGLV2-8P01709 118 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 MRPS36P82909 103 aaKnown RBP3.38□□□□□ -1.87
CHD9-201ENST00000219084 COX17Q14061 63 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 C14orf177Q52M58 125 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 Q6Q795 121 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 C1orf43Q9BWL3 253 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 DIAPH2-AS1Q14236 149 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 HIGD2BQ4VC39 106 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 SPART-AS1P0CW21 52 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 CGB3P0DN86 165 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 CGB7P0DN87 165 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 TIRAPP58753 221 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 TMEM61Q8N0U2 210 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 SPG11Q96JI7 2443 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 IGF1P05019 195 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 MYCNOSP40205 109 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 LOXL1Q08397 574 aaPredicted RBP3.38□□□□□ -1.87
CHD9-201ENST00000219084 ZMAT4Q9H898 229 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 IGHV4-4A0A075B6R2 117 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 IGHV3-16A0A0C4DH30 117 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 EBI3Q14213 229 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 DIRC1Q969H9 104 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.38□□□□□ -1.87
CHD9-201ENST00000219084 ETDCA0A1B0GVM5 59 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 IGKV2-29A2NJV5 120 aaPredicted RBP3.38□□□□□ -1.87
CHD9-201ENST00000219084 IBA57-AS1B1ANH7 110 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 J3QKU1 62 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 IGHV3-30-3P0DP02 117 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 NREPQ16612 68 aa3.38□□□□□ -1.87
CHD9-201ENST00000219084 TCL1BO95988 128 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 XCL1P47992 114 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 WFDC2Q14508 124 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 TRBV6-5A0A0K0K1A5 114 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 RNF223E7ERA6 249 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 MRAPQ8TCY5 172 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 C3orf22Q8N5N4 141 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 CLUHP3Q96NS8 147 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 TMEM223A0PJW6 202 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 GYPEP15421 78 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 MRGPRG-AS1Q2M3A8 158 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 Q96MF0 132 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 SIRPDQ9H106 197 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 HHLA3Q9XRX5 114 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 SP5Q6BEB4 398 aaPredicted RBP3.37□□□□□ -1.87
CHD9-201ENST00000219084 UFSP1Q6NVU6 142 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 C10orf105Q8TEF2 133 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 C2CD3Q4AC94 2353 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 LYRM9A8MSI8 78 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 ZNF295-AS1Q8N0V1 137 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 SS18L2Q9UHA2 77 aa3.37□□□□□ -1.87
CHD9-201ENST00000219084 TRBV27A0A0K0K1C4 114 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 LINC00173Q6ZV60 143 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 DAND5Q8N907 189 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 KIR2DL5BQ8NHK3 375 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 PIEZO1Q92508 2521 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 C3orf56Q8N813 242 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 RNF183Q96D59 192 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 IGHV3-38A0A0C4DH36 116 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 C5orf47Q569G3 176 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 LINC01600Q96MT4 127 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 TRBV12-3P01733 135 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 PRR31Q5SQ13 230 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 FANCD2OSQ96PS1 177 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 RPS28P62857 69 aaKnown RBP3.36□□□□□ -1.87
CHD9-201ENST00000219084 NFE4Q86UQ8 179 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 RITA1Q96K30 269 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 CAMK2N2Q96S95 79 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 FAM208BQ5VWN6 2430 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 A0A0J9YXV3 536 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 LY6HO94772 140 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 LRRC75A-AS1Q8N1F1 130 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 LY6LH3BQJ8 138 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 TNFRSF13BO14836 293 aaPredicted RBP3.36□□□□□ -1.87
CHD9-201ENST00000219084 DEFB113Q30KQ7 82 aa3.36□□□□□ -1.87
CHD9-201ENST00000219084 CRIP3Q6Q6R5 217 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms