RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 UFSP1Q6NVU6 142 aa21.61■■□□□ 1.05
PABPN1-201ENST00000216727 MRPL35Q9NZE8 188 aaKnown RBP21.61■■□□□ 1.05
PABPN1-201ENST00000216727 CYSLTR1Q9Y271 337 aa21.61■■□□□ 1.05
PABPN1-201ENST00000216727 H7C1H1 209 aa21.6■■□□□ 1.05
PABPN1-201ENST00000216727 C1orf158Q8N1D5 194 aa21.6■■□□□ 1.05
PABPN1-201ENST00000216727 NSD1Q96L73 2696 aaPredicted RBP21.6■■□□□ 1.05
PABPN1-201ENST00000216727 RIPPLY3P57055 190 aa21.59■■□□□ 1.05
PABPN1-201ENST00000216727 BOD1L2Q8IYS8 172 aa21.59■■□□□ 1.05
PABPN1-201ENST00000216727 NEXN-AS1Q8NBZ9 246 aa21.59■■□□□ 1.05
PABPN1-201ENST00000216727 TMEM208Q9BTX3 173 aa21.58■■□□□ 1.05
PABPN1-201ENST00000216727 HINT1P49773 126 aaPredicted RBP21.58■■□□□ 1.04
PABPN1-201ENST00000216727 C19orf73Q9NVV2 129 aa21.58■■□□□ 1.04
PABPN1-201ENST00000216727 DLEU1O43261 78 aa21.57■■□□□ 1.04
PABPN1-201ENST00000216727 PLNP26678 52 aa21.57■■□□□ 1.04
PABPN1-201ENST00000216727 F8VRH5 84 aa21.56■■□□□ 1.04
PABPN1-201ENST00000216727 BAALCQ8WXS3 180 aa21.55■■□□□ 1.04
PABPN1-201ENST00000216727 TP53TG1Q9Y2A0 90 aa21.55■■□□□ 1.04
PABPN1-201ENST00000216727 RHOHQ15669 191 aa21.55■■□□□ 1.04
PABPN1-201ENST00000216727 CFAP126Q5VTH2 177 aa21.55■■□□□ 1.04
PABPN1-201ENST00000216727 C2orf91Q6ZV80 131 aa21.55■■□□□ 1.04
PABPN1-201ENST00000216727 NIPBLQ6KC79 2804 aaeCLIP21.55■■□□□ 1.04
PABPN1-201ENST00000216727 LINC00482Q8N8I6 264 aa21.54■■□□□ 1.04
PABPN1-201ENST00000216727 IGIPA6NJ69 53 aa21.53■■□□□ 1.04
PABPN1-201ENST00000216727 RHODO00212 210 aa21.53■■□□□ 1.04
PABPN1-201ENST00000216727 PF4P02776 101 aa21.53■■□□□ 1.04
PABPN1-201ENST00000216727 ZC2HC1BQ5TFG8 222 aa21.53■■□□□ 1.04
PABPN1-201ENST00000216727 AZU1P20160 251 aa21.53■■□□□ 1.04
PABPN1-201ENST00000216727 IL17DQ8TAD2 202 aa21.53■■□□□ 1.04
PABPN1-201ENST00000216727 CHTOPQ9Y3Y2 248 aaKnown RBP21.53■■□□□ 1.04
PABPN1-201ENST00000216727 I3L3M4 83 aa21.52■■□□□ 1.04
PABPN1-201ENST00000216727 MPV17L2Q567V2 206 aa21.52■■□□□ 1.04
PABPN1-201ENST00000216727 NMUP48645 174 aa21.51■■□□□ 1.03
PABPN1-201ENST00000216727 C12orf54Q6X4T0 127 aa21.51■■□□□ 1.03
PABPN1-201ENST00000216727 TMEM141Q96I45 108 aa21.51■■□□□ 1.03
PABPN1-201ENST00000216727 TIMM17AQ99595 171 aa21.51■■□□□ 1.03
PABPN1-201ENST00000216727 IGHV3-73A0A0B4J1V6 119 aa21.51■■□□□ 1.03
PABPN1-201ENST00000216727 FN1P02751 2386 aaKnown RBP21.5■■□□□ 1.03
PABPN1-201ENST00000216727 C2CD3Q4AC94 2353 aa21.5■■□□□ 1.03
PABPN1-201ENST00000216727 SIVA1O15304 175 aa21.5■■□□□ 1.03
PABPN1-201ENST00000216727 TSHBP01222 138 aa21.5■■□□□ 1.03
PABPN1-201ENST00000216727 GIG44P09565 113 aaPredicted RBP21.5■■□□□ 1.03
PABPN1-201ENST00000216727 TCTAP57738 103 aa21.5■■□□□ 1.03
PABPN1-201ENST00000216727 MRPL16Q9NX20 251 aaKnown RBP21.5■■□□□ 1.03
PABPN1-201ENST00000216727 HIVEP1P15822 2718 aa21.5■■□□□ 1.03
PABPN1-201ENST00000216727 RS1O15537 224 aa21.5■■□□□ 1.03
PABPN1-201ENST00000216727 CRLF1O75462 422 aa21.5■■□□□ 1.03
PABPN1-201ENST00000216727 RNASE8Q8TDE3 154 aaKnown RBP21.5■■□□□ 1.03
PABPN1-201ENST00000216727 NACAE9PAV3 2078 aa21.5■■□□□ 1.03
PABPN1-201ENST00000216727 IGHV3OR16-12A0A075B7B8 117 aa21.49■■□□□ 1.03
PABPN1-201ENST00000216727 PCP2Q8IVA1 136 aa21.49■■□□□ 1.03
PABPN1-201ENST00000216727 PRSS29PA6NIE9 313 aa21.48■■□□□ 1.03
PABPN1-201ENST00000216727 RPL39P62891 51 aaKnown RBP21.48■■□□□ 1.03
PABPN1-201ENST00000216727 GTSCR1Q86UQ5 136 aa21.48■■□□□ 1.03
PABPN1-201ENST00000216727 WFDC10AQ9H1F0 79 aa21.48■■□□□ 1.03
PABPN1-201ENST00000216727 IGKV2D-26A0A0A0MRZ7 120 aa21.48■■□□□ 1.03
PABPN1-201ENST00000216727 DEFB104AQ8WTQ1 72 aa21.48■■□□□ 1.03
PABPN1-201ENST00000216727 TMEM263Q8WUH6 116 aaKnown RBP21.47■■□□□ 1.03
PABPN1-201ENST00000216727 BVES-AS1Q5T3Y7 98 aa21.46■■□□□ 1.03
PABPN1-201ENST00000216727 IGHV3-53P01767 116 aa21.46■■□□□ 1.03
PABPN1-201ENST00000216727 JMJD1CQ15652 2540 aa21.45■■□□□ 1.02
PABPN1-201ENST00000216727 P0DMU3 169 aa21.45■■□□□ 1.02
PABPN1-201ENST00000216727 FAM231AP0DMU4 169 aa21.45■■□□□ 1.02
PABPN1-201ENST00000216727 FAM231CP0DMU5 169 aa21.45■■□□□ 1.02
PABPN1-201ENST00000216727 C1QTNF4Q9BXJ3 329 aa21.45■■□□□ 1.02
PABPN1-201ENST00000216727 Q6ZSN1 163 aa21.45■■□□□ 1.02
PABPN1-201ENST00000216727 TNFRSF18Q9Y5U5 241 aa21.45■■□□□ 1.02
PABPN1-201ENST00000216727 C20orf203Q8NBC4 194 aa21.44■■□□□ 1.02
PABPN1-201ENST00000216727 PMVKQ15126 192 aa21.43■■□□□ 1.02
PABPN1-201ENST00000216727 DNAJC30Q96LL9 226 aa21.42■■□□□ 1.02
PABPN1-201ENST00000216727 RPL35AP18077 110 aaKnown RBP21.41■■□□□ 1.02
PABPN1-201ENST00000216727 INSL3P51460 131 aa21.4■■□□□ 1.02
PABPN1-201ENST00000216727 CSNK1G2-AS1Q8NCQ2 148 aa21.4■■□□□ 1.02
PABPN1-201ENST00000216727 CST9LQ9H4G1 147 aa21.39■■□□□ 1.02
PABPN1-201ENST00000216727 TRGV1A0A0A0MS02 117 aa21.39■■□□□ 1.01
PABPN1-201ENST00000216727 DAZ2Q13117 558 aaKnown RBP21.38■■□□□ 1.01
PABPN1-201ENST00000216727 TMEM97Q5BJF2 176 aa21.38■■□□□ 1.01
PABPN1-201ENST00000216727 PAPPA-AS1Q5QFB9 102 aa21.38■■□□□ 1.01
PABPN1-201ENST00000216727 OR4C5Q8NGB2 326 aa21.37■■□□□ 1.01
PABPN1-201ENST00000216727 C16orf74Q96GX8 76 aa21.37■■□□□ 1.01
PABPN1-201ENST00000216727 HIGD1BQ9P298 99 aa21.37■■□□□ 1.01
PABPN1-201ENST00000216727 Q9UF83 564 aa21.36■■□□□ 1.01
PABPN1-201ENST00000216727 IGLV4-69A0A075B6H9 119 aa21.36■■□□□ 1.01
PABPN1-201ENST00000216727 HSD52Q0P140 79 aa21.36■■□□□ 1.01
PABPN1-201ENST00000216727 TTTY13Q9BZ97 58 aa21.35■■□□□ 1.01
PABPN1-201ENST00000216727 ZMAT5Q9UDW3 170 aaKnown RBP21.35■■□□□ 1.01
PABPN1-201ENST00000216727 C9orf66Q5T8R8 295 aa21.34■■□□□ 1.01
PABPN1-201ENST00000216727 Q6ZTI0 123 aa21.34■■□□□ 1.01
PABPN1-201ENST00000216727 CITED1Q99966 193 aa21.34■■□□□ 1.01
PABPN1-201ENST00000216727 PLAC8L1A1L4L8 177 aa21.33■■□□□ 1.01
PABPN1-201ENST00000216727 ZNF25P17030 456 aaPredicted RBP21.33■■□□□ 1.01
PABPN1-201ENST00000216727 PYGO1Q9Y3Y4 419 aa21.33■■□□□ 1.01
PABPN1-201ENST00000216727 LINC00469Q8N7U9 141 aa21.33■■□□□ 1
PABPN1-201ENST00000216727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.33■■□□□ 1
PABPN1-201ENST00000216727 TRAV4A0A0B4J268 109 aa21.32■■□□□ 1
PABPN1-201ENST00000216727 SEC11AP67812 179 aa21.32■■□□□ 1
PABPN1-201ENST00000216727 E9PLD3 99 aa21.31■■□□□ 1
PABPN1-201ENST00000216727 TRBV25-1A0A075B6N4 114 aa21.31■■□□□ 1
PABPN1-201ENST00000216727 C11orf86A6NJI1 115 aa21.31■■□□□ 1
PABPN1-201ENST00000216727 NOP10Q9NPE3 64 aaKnown RBP21.31■■□□□ 1
PABPN1-201ENST00000216727 TRAV8-6A0A0B4J262 113 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms