RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Pdlim4P70271 330 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Klf14Q19A41 325 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 B020031M17RikQ3UT11 173 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Timm21Q8CCM6 249 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Kcnmb2Q9CZM9 235 aa8.03□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr869E9PX82 323 aa8.02□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 C2cd4aE9Q861 334 aa8.02□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm21732J3QM79 361 aa8.02□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm21921J3QNB5 361 aa8.02□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Pax8Q00288 457 aa8.02□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Zfp941Q3URY5 674 aa8.02□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Gm6899Q3USS0 134 aa8.02□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Vmn1r195Q5SVD6 316 aa8.02□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Olfr147Q60886 317 aa8.02□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Morn2Q6UL01 79 aa8.02□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Fam19a2Q7TPG7 131 aa8.02□□□□□ -1.12
Pcdh1-201ENSMUST00000057185 Tanc2A2A690 1994 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 3110021N24RikJ3QMN2 152 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 AgerQ62151 402 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr823Q7TRH2 315 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Hes7Q8BKT2 225 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Rnd1Q8BLR7 232 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Eda2rQ8BX35 297 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr303Q8VFP0 319 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr824Q8VFU4 315 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Cldn16Q925N4 235 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Borcs7Q9CRC6 105 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ociad1Q9CRD0 247 aaKnown RBP8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Tmub1Q9JMG3 245 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Nav2E9Q842 2432 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 SetxA2AKX3 2646 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ighv7-3A0A075B5R2 120 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Trbv26A0A0B4J1P5 115 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Igkv6-23A0A140T8N5 115 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 H2al1nQ497L1 109 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Spem1Q5F289 310 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Prss46Q5M8S2 314 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Trav15-1-dv6-1Q5R1D2 117 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Pafah1b2Q61206 229 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr1434Q7TQR9 312 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr491Q8VG06 310 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Lurap1Q9D6I9 239 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Q9DAA3 117 aa8.02□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Trav5-1A0A075B5Z7 114 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Vma21-psA0A140T8R2 101 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Timp3P39876 211 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Cdkn1bP46414 197 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Rpl8P62918 257 aaKnown RBP8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Trav6-2Q5R1I4 113 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Hist2h2beQ64524 126 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Slc25a29Q8BL03 306 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Dram1Q9DC58 238 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ncoa6Q9JL19 2067 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Igkv4-80A0A075B5L7 116 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ighv9-2A0A0B4J1J4 117 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Tnfsf11O35235 316 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Cd81P35762 236 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Cox7a2P48771 83 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Q0VG62 139 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Spred3Q6P6N5 408 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr1383Q7TQT2 311 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gng5Q80SZ7 68 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm5868Q8BJG1 145 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr1441Q8VFV3 318 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ssbp2Q9CYZ8 361 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ypel1Q9ESC7 118 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Psg18B2RSG7 476 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Adamts17E9Q4D1 1122 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm10203F6QJ09 66 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Iqcf6G3UWF2 157 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 B2mP01887 119 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ly6c1P0CW02 131 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Rnase9P60154 184 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Rtl4Q3URY0 304 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Obox7Q4KL20 218 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Hapln4Q80WM4 400 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Saxo2Q8BQB6 394 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Rnf182Q8C432 247 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Spsb4Q8R5B6 273 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr123Q8VFQ1 309 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Cma2Q91VB1 246 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Barx1Q9ER42 254 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Tnfrsf13bQ9ET35 249 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 St6galnac6Q9JM95 333 aa8.01□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 9830107B12RikD3Z5D6 160 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 TymsP07607 307 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ypel4Q65Z93 127 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 2810408A11RikQ6NSU2 435 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm5148Q8BGG2 154 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Immp2lQ8BPT6 175 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Rbms1Q91W59 403 aaKnown RBP8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 FetubQ9QXC1 388 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 NbasE9Q411 2356 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm12886B1AZM5 119 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Olfr1116E9PXB8 307 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Slc25a17O70579 307 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Rpp30O88796 268 aaKnown RBP8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Hoxa1P09022 331 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Gm16686Q3UMN9 131 aa8□□□□□ -1.13
Pcdh1-201ENSMUST00000057185 Ypel2Q65Z95 119 aa8□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms