RNA–Protein interactions for RNA: ENST00000642115.1

LINC02228-204, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-204ENST00000642115 CELSR1Q9NYQ6 3014 aa11.92□□□□□ -0.5
LINC02228-204ENST00000642115 LINC01620Q4KN68 170 aa11.91□□□□□ -0.5
LINC02228-204ENST00000642115 C16orf92Q96LL3 132 aa11.91□□□□□ -0.5
LINC02228-204ENST00000642115 LINC01587Q99440 93 aa11.91□□□□□ -0.5
LINC02228-204ENST00000642115 RPL11P62913 178 aaKnown RBP11.91□□□□□ -0.5
LINC02228-204ENST00000642115 ATP6V0E1O15342 81 aa11.91□□□□□ -0.5
LINC02228-204ENST00000642115 TCF15Q12870 199 aa11.91□□□□□ -0.5
LINC02228-204ENST00000642115 BEX4Q9NWD9 120 aaPredicted RBP11.91□□□□□ -0.5
LINC02228-204ENST00000642115 IGLV4-69A0A075B6H9 119 aa11.9□□□□□ -0.5
LINC02228-204ENST00000642115 DUSP14O95147 198 aaKnown RBP11.9□□□□□ -0.5
LINC02228-204ENST00000642115 ATP5J2P56134 94 aa11.9□□□□□ -0.5
LINC02228-204ENST00000642115 PRR9Q5T870 116 aa11.9□□□□□ -0.5
LINC02228-204ENST00000642115 LY6G5BQ8NDX9 201 aa11.9□□□□□ -0.5
LINC02228-204ENST00000642115 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC02228-204ENST00000642115 TMEM263Q8WUH6 116 aaKnown RBP11.89□□□□□ -0.51
LINC02228-204ENST00000642115 SPANXA1Q9NS26 97 aa11.89□□□□□ -0.51
LINC02228-204ENST00000642115 LGALS9O00182 355 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 RPL13AP40429 203 aaKnown RBP11.88□□□□□ -0.51
LINC02228-204ENST00000642115 MSRB2Q9Y3D2 182 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 SPG11Q96JI7 2443 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 TSHBP01222 138 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 HERVK_113P61574 105 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 ZNF56Q15929 161 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 METTL26Q96S19 204 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 SLC50A1Q9BRV3 221 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 TMEM126AQ9H061 195 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 ZFAND3Q9H8U3 227 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 ZFHX3Q15911 3703 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 HRNRQ86YZ3 2850 aaPredicted RBP11.88□□□□□ -0.51
LINC02228-204ENST00000642115 Q1RN00 199 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 AMELXQ99217 191 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 PHLDA3Q9Y5J5 127 aa11.88□□□□□ -0.51
LINC02228-204ENST00000642115 CHD8Q9HCK8 2581 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 RNF223E7ERA6 249 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 H3BMM0 161 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 ATXN8Q156A1 80 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 TMEM170BQ5T4T1 132 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 Q8N9W7 124 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 UBE2WQ96B02 151 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 IGHV3OR16-10A0A075B7F0 116 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 CLPSL1A2RUU4 121 aa11.87□□□□□ -0.51
LINC02228-204ENST00000642115 IGHV4-4A0A075B6R2 117 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 ODF3BA8MYP8 253 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 P0DMU3 169 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 FAM231AP0DMU4 169 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 FAM231CP0DMU5 169 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 LINC00694P0DN24 101 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 ZFP36P26651 326 aaKnown RBP11.86□□□□□ -0.51
LINC02228-204ENST00000642115 CCDC140Q96MF4 163 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 SORL1Q92673 2214 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 TRBV10-2A0A0K0K1G8 114 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 TMEM219Q86XT9 240 aa11.86□□□□□ -0.51
LINC02228-204ENST00000642115 NCOR2Q9Y618 2525 aa11.85□□□□□ -0.51
LINC02228-204ENST00000642115 F6UB75 175 aa11.85□□□□□ -0.51
LINC02228-204ENST00000642115 DUX3Q96PT4 197 aa11.85□□□□□ -0.51
LINC02228-204ENST00000642115 CSDC2Q9Y534 153 aaKnown RBP11.85□□□□□ -0.51
LINC02228-204ENST00000642115 LOC107984640A0A0U1RRK4 108 aa11.85□□□□□ -0.51
LINC02228-204ENST00000642115 GNRH2O43555 120 aa11.85□□□□□ -0.51
LINC02228-204ENST00000642115 RNASE4P34096 147 aaKnown RBP11.85□□□□□ -0.51
LINC02228-204ENST00000642115 MUSTN1Q8IVN3 82 aa11.85□□□□□ -0.51
LINC02228-204ENST00000642115 CCL21O00585 134 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 CDSNQ15517 529 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 NRGNQ92686 78 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 J3QQQ9 107 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 C2orf82Q6UX34 121 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 ZNRF2Q8NHG8 242 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 C20orf173Q96LM9 149 aa11.84□□□□□ -0.51
LINC02228-204ENST00000642115 M0R1W7 72 aa11.83□□□□□ -0.52
LINC02228-204ENST00000642115 RBAKDNA6NC62 111 aa11.83□□□□□ -0.52
LINC02228-204ENST00000642115 TRIAP1O43715 76 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 FAM110DQ8TAY7 271 aaPredicted RBP11.82□□□□□ -0.52
LINC02228-204ENST00000642115 TP53TG1Q9Y2A0 90 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 F5H697 171 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 LGALS3P17931 250 aaKnown RBP11.82□□□□□ -0.52
LINC02228-204ENST00000642115 RPL39P62891 51 aaKnown RBP11.82□□□□□ -0.52
LINC02228-204ENST00000642115 Q8N6K4 173 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 A0A0B4J2C4 111 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 PMVKQ15126 192 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 EEF1AKMT3Q96AZ1 226 aa11.82□□□□□ -0.52
LINC02228-204ENST00000642115 OOSP1A8MZH6 123 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 H7C423 109 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 PAPPA-AS1Q5QFB9 102 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 CEMP1Q6PRD7 247 aaPredicted RBP11.81□□□□□ -0.52
LINC02228-204ENST00000642115 LINC01600Q96MT4 127 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 IGIPA6NJ69 53 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 IGHV3-11P01762 117 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 JPT2Q9H910 190 aa11.81□□□□□ -0.52
LINC02228-204ENST00000642115 FAM236AA0A1B0GUQ0 79 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 FAM236BA0A1B0GV22 79 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 ZNF22P17026 224 aaPredicted RBP11.8□□□□□ -0.52
LINC02228-204ENST00000642115 SAA4P35542 130 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 TRGV11A0A075B6L2 103 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 IGHV3-64A0A075B6Q5 118 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 MRPL23Q16540 153 aaKnown RBP11.8□□□□□ -0.52
LINC02228-204ENST00000642115 DNAJC30Q96LL9 226 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 DPH3P1Q9H4G8 78 aa11.8□□□□□ -0.52
LINC02228-204ENST00000642115 A0A087WWL8 130 aa11.79□□□□□ -0.52
LINC02228-204ENST00000642115 TRBV12-3P01733 135 aa11.79□□□□□ -0.52
LINC02228-204ENST00000642115 IGF2-ASQ6U949 168 aa11.79□□□□□ -0.52
LINC02228-204ENST00000642115 C9orf47Q6ZRZ4 202 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms