RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.25□□□□□ -0.93
PHGDH-218ENST00000641491 DPH3P1Q9H4G8 78 aa9.25□□□□□ -0.93
PHGDH-218ENST00000641491 A0A087WWL8 130 aa9.24□□□□□ -0.93
PHGDH-218ENST00000641491 IGHV3-73A0A0B4J1V6 119 aa9.24□□□□□ -0.93
PHGDH-218ENST00000641491 H7C1H1 209 aa9.24□□□□□ -0.93
PHGDH-218ENST00000641491 COX19Q49B96 90 aa9.24□□□□□ -0.93
PHGDH-218ENST00000641491 C14orf178Q8N769 122 aaPredicted RBP9.24□□□□□ -0.93
PHGDH-218ENST00000641491 WWC2-AS2Q96NR7 200 aa9.24□□□□□ -0.93
PHGDH-218ENST00000641491 BIRC6Q9NR09 4857 aa9.23□□□□□ -0.93
PHGDH-218ENST00000641491 DEFB131BA0A096LNP1 70 aa9.23□□□□□ -0.93
PHGDH-218ENST00000641491 RS1O15537 224 aa9.23□□□□□ -0.93
PHGDH-218ENST00000641491 NXPH4O95158 308 aa9.23□□□□□ -0.93
PHGDH-218ENST00000641491 CFAP126Q5VTH2 177 aa9.23□□□□□ -0.93
PHGDH-218ENST00000641491 ZFP2Q6ZN57 461 aa9.23□□□□□ -0.93
PHGDH-218ENST00000641491 Q6ZTC4 211 aa9.23□□□□□ -0.93
PHGDH-218ENST00000641491 FAM210BQ96KR6 192 aa9.23□□□□□ -0.93
PHGDH-218ENST00000641491 PRADC1Q9BSG0 188 aa9.23□□□□□ -0.93
PHGDH-218ENST00000641491 CNFNQ9BYD5 112 aa9.23□□□□□ -0.93
PHGDH-218ENST00000641491 IGHV4-4A0A075B6R2 117 aa9.22□□□□□ -0.93
PHGDH-218ENST00000641491 C12orf74Q32Q52 190 aa9.22□□□□□ -0.93
PHGDH-218ENST00000641491 RASL11AQ6T310 242 aa9.22□□□□□ -0.93
PHGDH-218ENST00000641491 C18orf15Q96N68 181 aa9.22□□□□□ -0.93
PHGDH-218ENST00000641491 KLK5Q9Y337 293 aaPredicted RBP9.22□□□□□ -0.93
PHGDH-218ENST00000641491 NUPR2A6NF83 97 aa9.21□□□□□ -0.94
PHGDH-218ENST00000641491 TMEM88Q6PEY1 159 aa9.21□□□□□ -0.94
PHGDH-218ENST00000641491 LINC00612Q8N6U2 182 aa9.21□□□□□ -0.94
PHGDH-218ENST00000641491 EVI2AP22794 236 aa9.2□□□□□ -0.94
PHGDH-218ENST00000641491 RHOHQ15669 191 aa9.2□□□□□ -0.94
PHGDH-218ENST00000641491 CBLN2Q8IUK8 224 aa9.2□□□□□ -0.94
PHGDH-218ENST00000641491 PHLDA1Q8WV24 401 aaPredicted RBP9.2□□□□□ -0.94
PHGDH-218ENST00000641491 FRZBQ92765 325 aa9.2□□□□□ -0.94
PHGDH-218ENST00000641491 ZNF479Q96JC4 524 aa9.2□□□□□ -0.94
PHGDH-218ENST00000641491 TMEM191AQ9H0A3 160 aa9.2□□□□□ -0.94
PHGDH-218ENST00000641491 EDA2RQ9HAV5 297 aa9.2□□□□□ -0.94
PHGDH-218ENST00000641491 MSRB1Q9NZV6 116 aa9.2□□□□□ -0.94
PHGDH-218ENST00000641491 PRO0255Q9UI72 69 aa9.2□□□□□ -0.94
PHGDH-218ENST00000641491 HHLA3Q9XRX5 114 aa9.2□□□□□ -0.94
PHGDH-218ENST00000641491 COL7A1Q02388 2944 aa9.2□□□□□ -0.94
PHGDH-218ENST00000641491 PAX4O43316 350 aa9.19□□□□□ -0.94
PHGDH-218ENST00000641491 HLA-DQA1P01909 254 aa9.19□□□□□ -0.94
PHGDH-218ENST00000641491 MT-ND6P03923 174 aa9.19□□□□□ -0.94
PHGDH-218ENST00000641491 ATRAIDQ6UW56 229 aa9.19□□□□□ -0.94
PHGDH-218ENST00000641491 JPT2Q9H910 190 aa9.19□□□□□ -0.94
PHGDH-218ENST00000641491 K7EQD1 137 aa9.18□□□□□ -0.94
PHGDH-218ENST00000641491 PPP1R17O96001 155 aa9.18□□□□□ -0.94
PHGDH-218ENST00000641491 EPPK1P58107 5090 aaKnown RBP9.18□□□□□ -0.94
PHGDH-218ENST00000641491 TRAV26-1A0A087WT03 109 aa9.17□□□□□ -0.94
PHGDH-218ENST00000641491 A0A0J9YY99 117 aa9.17□□□□□ -0.94
PHGDH-218ENST00000641491 APCSP02743 223 aa9.17□□□□□ -0.94
PHGDH-218ENST00000641491 CKS2P33552 79 aa9.17□□□□□ -0.94
PHGDH-218ENST00000641491 RPL36AP83881 106 aaKnown RBP9.17□□□□□ -0.94
PHGDH-218ENST00000641491 ELOBQ15370 118 aa9.17□□□□□ -0.94
PHGDH-218ENST00000641491 ZNF575Q86XF7 245 aa9.17□□□□□ -0.94
PHGDH-218ENST00000641491 RPL36ALQ969Q0 106 aaKnown RBP9.17□□□□□ -0.94
PHGDH-218ENST00000641491 MRAP2Q96G30 205 aa9.17□□□□□ -0.94
PHGDH-218ENST00000641491 SAMD10Q9BYL1 202 aa9.17□□□□□ -0.94
PHGDH-218ENST00000641491 TNFRSF18Q9Y5U5 241 aa9.17□□□□□ -0.94
PHGDH-218ENST00000641491 ICOSQ9Y6W8 199 aa9.17□□□□□ -0.94
PHGDH-218ENST00000641491 TGIF2-C20orf24A0A0A6YYL0 155 aa9.16□□□□□ -0.94
PHGDH-218ENST00000641491 TRBV6-4A0A1B0GX49 114 aa9.16□□□□□ -0.94
PHGDH-218ENST00000641491 A0A1B0GXF2 115 aa9.16□□□□□ -0.94
PHGDH-218ENST00000641491 IGLL5B9A064 214 aa9.16□□□□□ -0.94
PHGDH-218ENST00000641491 NUDT3O95989 172 aa9.16□□□□□ -0.94
PHGDH-218ENST00000641491 CRYGDP07320 174 aa9.16□□□□□ -0.94
PHGDH-218ENST00000641491 GATA1P15976 413 aaPredicted RBP9.16□□□□□ -0.94
PHGDH-218ENST00000641491 SRIP30626 198 aa9.16□□□□□ -0.94
PHGDH-218ENST00000641491 AMN1Q8IY45 258 aa9.16□□□□□ -0.94
PHGDH-218ENST00000641491 C15orf53Q8NAA6 179 aa9.16□□□□□ -0.94
PHGDH-218ENST00000641491 MUC7Q8TAX7 377 aa9.16□□□□□ -0.94
PHGDH-218ENST00000641491 GNB1LQ9BYB4 327 aa9.16□□□□□ -0.94
PHGDH-218ENST00000641491 TRAPPC1Q9Y5R8 145 aa9.16□□□□□ -0.94
PHGDH-218ENST00000641491 TRBV24-1A0A075B6N3 115 aa9.15□□□□□ -0.94
PHGDH-218ENST00000641491 TRBV10-1A0A0K0K1A3 114 aa9.15□□□□□ -0.94
PHGDH-218ENST00000641491 PPBPP02775 128 aa9.15□□□□□ -0.94
PHGDH-218ENST00000641491 GYPEP15421 78 aa9.15□□□□□ -0.94
PHGDH-218ENST00000641491 FABP9Q0Z7S8 132 aa9.15□□□□□ -0.94
PHGDH-218ENST00000641491 FHL2Q14192 279 aa9.15□□□□□ -0.94
PHGDH-218ENST00000641491 OR10J3Q5JRS4 329 aa9.15□□□□□ -0.94
PHGDH-218ENST00000641491 FAM104BQ5XKR9 115 aa9.15□□□□□ -0.94
PHGDH-218ENST00000641491 SUMO4Q6EEV6 95 aa9.15□□□□□ -0.94
PHGDH-218ENST00000641491 SH2D6Q7Z4S9 175 aa9.15□□□□□ -0.94
PHGDH-218ENST00000641491 SCO1O75880 301 aa9.14□□□□□ -0.95
PHGDH-218ENST00000641491 RPS10P46783 165 aaKnown RBP9.14□□□□□ -0.95
PHGDH-218ENST00000641491 CRYBA4P53673 196 aa9.14□□□□□ -0.95
PHGDH-218ENST00000641491 MRPL23Q16540 153 aaKnown RBP9.14□□□□□ -0.95
PHGDH-218ENST00000641491 ZFAND6Q6FIF0 208 aa9.14□□□□□ -0.95
PHGDH-218ENST00000641491 CEMP1Q6PRD7 247 aaPredicted RBP9.14□□□□□ -0.95
PHGDH-218ENST00000641491 ORMDL3Q8N138 153 aa9.14□□□□□ -0.95
PHGDH-218ENST00000641491 POM121L12Q8N7R1 296 aa9.14□□□□□ -0.95
PHGDH-218ENST00000641491 SLC25A29Q8N8R3 303 aa9.14□□□□□ -0.95
PHGDH-218ENST00000641491 GAGE12JA6NER3 117 aa9.13□□□□□ -0.95
PHGDH-218ENST00000641491 HOXA5P20719 270 aa9.13□□□□□ -0.95
PHGDH-218ENST00000641491 GAGE1Q13065 139 aa9.13□□□□□ -0.95
PHGDH-218ENST00000641491 GAGE4Q13068 117 aa9.13□□□□□ -0.95
PHGDH-218ENST00000641491 GAGE5Q13069 117 aa9.13□□□□□ -0.95
PHGDH-218ENST00000641491 GAGE13Q4V321 117 aa9.13□□□□□ -0.95
PHGDH-218ENST00000641491 DNAJC30Q96LL9 226 aa9.13□□□□□ -0.95
PHGDH-218ENST00000641491 KRTAP17-1Q9BYP8 105 aa9.13□□□□□ -0.95
PHGDH-218ENST00000641491 MRPL18Q9H0U6 180 aaKnown RBP9.13□□□□□ -0.95
PHGDH-218ENST00000641491 RYR2Q92736 4967 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms