RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 TRAV12-2A0A075B6T6 113 aa8.31□□□□□ -1.08
GFAP-238ENST00000640859 IGHV1OR15-1A0A075B7D0 117 aa8.31□□□□□ -1.08
GFAP-238ENST00000640859 TRAV26-2A0A0B4J265 109 aa8.31□□□□□ -1.08
GFAP-238ENST00000640859 TRAV25A0A0B4J276 109 aa8.31□□□□□ -1.08
GFAP-238ENST00000640859 H3BMM0 161 aa8.31□□□□□ -1.08
GFAP-238ENST00000640859 CD7P09564 240 aa8.31□□□□□ -1.08
GFAP-238ENST00000640859 IGLC3P0DOY3 106 aa8.31□□□□□ -1.08
GFAP-238ENST00000640859 LORP23490 312 aaPredicted RBP8.31□□□□□ -1.08
GFAP-238ENST00000640859 FCER1GP30273 86 aa8.31□□□□□ -1.08
GFAP-238ENST00000640859 LINC00315P59091 139 aa8.31□□□□□ -1.08
GFAP-238ENST00000640859 SPINK13Q1W4C9 94 aa8.31□□□□□ -1.08
GFAP-238ENST00000640859 C14orf178Q8N769 122 aaPredicted RBP8.31□□□□□ -1.08
GFAP-238ENST00000640859 C11orf44Q8N8P7 122 aa8.31□□□□□ -1.08
GFAP-238ENST00000640859 CITED2Q99967 270 aaPredicted RBP8.31□□□□□ -1.08
GFAP-238ENST00000640859 TSSC4Q9Y5U2 329 aaPredicted RBP8.31□□□□□ -1.08
GFAP-238ENST00000640859 A0A1W2PRX2 142 aa8.3□□□□□ -1.08
GFAP-238ENST00000640859 RBMY1BA6NDE4 496 aaKnown RBP8.3□□□□□ -1.08
GFAP-238ENST00000640859 RBMY1EA6NEQ0 496 aaKnown RBP8.3□□□□□ -1.08
GFAP-238ENST00000640859 RBMY1DP0C7P1 496 aaKnown RBP8.3□□□□□ -1.08
GFAP-238ENST00000640859 IGLL1P15814 213 aa8.3□□□□□ -1.08
GFAP-238ENST00000640859 FXYD7P58549 80 aa8.3□□□□□ -1.08
GFAP-238ENST00000640859 CD300EQ496F6 205 aaPredicted RBP8.3□□□□□ -1.08
GFAP-238ENST00000640859 ZNF705AQ6ZN79 300 aaPredicted RBP8.3□□□□□ -1.08
GFAP-238ENST00000640859 RASL10AQ92737 203 aa8.3□□□□□ -1.08
GFAP-238ENST00000640859 AP1S3Q96PC3 154 aa8.3□□□□□ -1.08
GFAP-238ENST00000640859 MAP6D1Q9H9H5 199 aa8.3□□□□□ -1.08
GFAP-238ENST00000640859 UQCR10Q9UDW1 63 aa8.3□□□□□ -1.08
GFAP-238ENST00000640859 CUBNO60494 3623 aa8.3□□□□□ -1.08
GFAP-238ENST00000640859 MRPL52Q86TS9 123 aaKnown RBP8.29□□□□□ -1.08
GFAP-238ENST00000640859 IFI27L1Q96BM0 104 aa8.29□□□□□ -1.08
GFAP-238ENST00000640859 SPAG8Q99932 426 aaPredicted RBP8.29□□□□□ -1.08
GFAP-238ENST00000640859 C20orf78Q9BR46 151 aa8.29□□□□□ -1.08
GFAP-238ENST00000640859 MCRIP2Q9BUT9 160 aaKnown RBP8.29□□□□□ -1.08
GFAP-238ENST00000640859 ZNF256Q9Y2P7 627 aaPredicted RBP8.29□□□□□ -1.08
GFAP-238ENST00000640859 MGPP08493 103 aa8.28□□□□□ -1.08
GFAP-238ENST00000640859 RBMY1A1P0DJD3 496 aaKnown RBP8.28□□□□□ -1.08
GFAP-238ENST00000640859 RBMY1CP0DJD4 496 aa8.28□□□□□ -1.08
GFAP-238ENST00000640859 RBMY1FQ15415 496 aaKnown RBP8.28□□□□□ -1.08
GFAP-238ENST00000640859 ZNF124Q15973 351 aa8.28□□□□□ -1.08
GFAP-238ENST00000640859 LGALS9BQ3B8N2 356 aa8.28□□□□□ -1.08
GFAP-238ENST00000640859 LGALS9CQ6DKI2 356 aa8.28□□□□□ -1.08
GFAP-238ENST00000640859 NDUFA11Q86Y39 141 aa8.28□□□□□ -1.08
GFAP-238ENST00000640859 Q8N1Y9 231 aa8.28□□□□□ -1.08
GFAP-238ENST00000640859 CLUHP3Q96NS8 147 aa8.28□□□□□ -1.08
GFAP-238ENST00000640859 CITED1Q99966 193 aa8.28□□□□□ -1.08
GFAP-238ENST00000640859 C2orf88Q9BSF0 95 aa8.28□□□□□ -1.08
GFAP-238ENST00000640859 SMIM2Q9BVW6 85 aa8.28□□□□□ -1.08
GFAP-238ENST00000640859 MDFICQ9P1T7 246 aa8.28□□□□□ -1.08
GFAP-238ENST00000640859 TRGV11A0A075B6L2 103 aa8.27□□□□□ -1.09
GFAP-238ENST00000640859 LAGE3Q14657 143 aa8.27□□□□□ -1.09
GFAP-238ENST00000640859 LBHQ53QV2 105 aaPredicted RBP8.27□□□□□ -1.09
GFAP-238ENST00000640859 RPL39LQ96EH5 51 aaKnown RBP8.27□□□□□ -1.09
GFAP-238ENST00000640859 SNHG12Q9BXW3 62 aa8.27□□□□□ -1.09
GFAP-238ENST00000640859 JPT2Q9H910 190 aa8.27□□□□□ -1.09
GFAP-238ENST00000640859 ST20Q9HBF5 79 aa8.27□□□□□ -1.09
GFAP-238ENST00000640859 hDV102S1A0JD36 115 aa8.26□□□□□ -1.09
GFAP-238ENST00000640859 H0Y8G0 127 aa8.26□□□□□ -1.09
GFAP-238ENST00000640859 M0R143 59 aa8.26□□□□□ -1.09
GFAP-238ENST00000640859 PPP1R17O96001 155 aa8.26□□□□□ -1.09
GFAP-238ENST00000640859 PF4P02776 101 aa8.26□□□□□ -1.09
GFAP-238ENST00000640859 SUMO2P61956 95 aaKnown RBP8.26□□□□□ -1.09
GFAP-238ENST00000640859 RPL32P62910 135 aaKnown RBP8.26□□□□□ -1.09
GFAP-238ENST00000640859 NSUN5P1Q3KNT7 163 aa8.26□□□□□ -1.09
GFAP-238ENST00000640859 SYT8Q8NBV8 401 aa8.26□□□□□ -1.09
GFAP-238ENST00000640859 PMCHL2Q9BQD1 86 aa8.26□□□□□ -1.09
GFAP-238ENST00000640859 TCAPO15273 167 aa8.25□□□□□ -1.09
GFAP-238ENST00000640859 GHRHP01286 108 aa8.25□□□□□ -1.09
GFAP-238ENST00000640859 SMIM17P0DL12 118 aa8.25□□□□□ -1.09
GFAP-238ENST00000640859 ODF3L2Q3SX64 289 aa8.25□□□□□ -1.09
GFAP-238ENST00000640859 LINC00467Q9BRT7 94 aa8.25□□□□□ -1.09
GFAP-238ENST00000640859 GOLT1BQ9Y3E0 138 aa8.25□□□□□ -1.09
GFAP-238ENST00000640859 WNK1Q9H4A3 2382 aa8.24□□□□□ -1.09
GFAP-238ENST00000640859 HSBP1L1C9JCN9 74 aa8.24□□□□□ -1.09
GFAP-238ENST00000640859 K7EMI3 77 aa8.24□□□□□ -1.09
GFAP-238ENST00000640859 CRYGDP07320 174 aa8.24□□□□□ -1.09
GFAP-238ENST00000640859 SUMO4Q6EEV6 95 aa8.24□□□□□ -1.09
GFAP-238ENST00000640859 Q6ZN92 141 aa8.24□□□□□ -1.09
GFAP-238ENST00000640859 C18orf15Q96N68 181 aa8.24□□□□□ -1.09
GFAP-238ENST00000640859 TENM1Q9UKZ4 2725 aa8.23□□□□□ -1.09
GFAP-238ENST00000640859 A0A087WWL8 130 aa8.23□□□□□ -1.09
GFAP-238ENST00000640859 CBY3A6NI87 242 aa8.23□□□□□ -1.09
GFAP-238ENST00000640859 ATP5LO75964 103 aa8.23□□□□□ -1.09
GFAP-238ENST00000640859 HNRNPA3P51991 378 aaKnown RBP8.23□□□□□ -1.09
GFAP-238ENST00000640859 POLR2KP53803 58 aaKnown RBP8.23□□□□□ -1.09
GFAP-238ENST00000640859 KRTAP10-3P60369 221 aa8.23□□□□□ -1.09
GFAP-238ENST00000640859 ORMDL2Q53FV1 153 aa8.23□□□□□ -1.09
GFAP-238ENST00000640859 PTH2Q96A98 100 aa8.23□□□□□ -1.09
GFAP-238ENST00000640859 ZMAT4Q9H898 229 aa8.23□□□□□ -1.09
GFAP-238ENST00000640859 MRPS16Q9Y3D3 137 aaKnown RBP8.23□□□□□ -1.09
GFAP-238ENST00000640859 TRBV6-5A0A0K0K1A5 114 aa8.22□□□□□ -1.09
GFAP-238ENST00000640859 NUDT3O95989 172 aa8.22□□□□□ -1.09
GFAP-238ENST00000640859 CMC4P56277 68 aaPredicted RBP8.22□□□□□ -1.09
GFAP-238ENST00000640859 ODF1Q14990 250 aa8.22□□□□□ -1.09
GFAP-238ENST00000640859 CSTL1Q9H114 145 aa8.22□□□□□ -1.09
GFAP-238ENST00000640859 DKK2Q9UBU2 259 aa8.22□□□□□ -1.09
GFAP-238ENST00000640859 OR11H12B2RN74 326 aa8.21□□□□□ -1.1
GFAP-238ENST00000640859 ZNF876PQ49A33 203 aa8.21□□□□□ -1.1
GFAP-238ENST00000640859 ANKRD39Q53RE8 183 aa8.21□□□□□ -1.1
GFAP-238ENST00000640859 PIK3CD-AS1Q5SR53 167 aa8.21□□□□□ -1.1
GFAP-238ENST00000640859 MORN3Q6PF18 240 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms