RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 EML5Q05BV3 1969 aa0.63□□□□□ -2.31
GYPB-216ENST00000638448 BCL9LQ86UU0 1499 aa0.63□□□□□ -2.31
GYPB-216ENST00000638448 A6NIN4 97 aa0.63□□□□□ -2.31
GYPB-216ENST00000638448 PRB4P10163 310 aaPredicted RBP0.63□□□□□ -2.31
GYPB-216ENST00000638448 FGF7P21781 194 aa0.63□□□□□ -2.31
GYPB-216ENST00000638448 NPC2P61916 151 aa0.63□□□□□ -2.31
GYPB-216ENST00000638448 C4orf33Q8N1A6 199 aa0.63□□□□□ -2.31
GYPB-216ENST00000638448 DSCR8Q96T75 97 aa0.63□□□□□ -2.31
GYPB-216ENST00000638448 AGPAT4-IT1Q9H0P7 198 aa0.63□□□□□ -2.31
GYPB-216ENST00000638448 RERGLQ9H628 205 aa0.63□□□□□ -2.31
GYPB-216ENST00000638448 RPRMQ9NS64 109 aa0.63□□□□□ -2.31
GYPB-216ENST00000638448 ABCA4P78363 2273 aa0.63□□□□□ -2.31
GYPB-216ENST00000638448 NAIPQ13075 1403 aa0.63□□□□□ -2.31
GYPB-216ENST00000638448 CDK5RAP2Q96SN8 1893 aa0.63□□□□□ -2.31
GYPB-216ENST00000638448 CASZ1Q86V15 1759 aa0.62□□□□□ -2.31
GYPB-216ENST00000638448 KNTC1P50748 2209 aa0.62□□□□□ -2.31
GYPB-216ENST00000638448 RPL13AP3Q6NVV1 102 aa0.62□□□□□ -2.31
GYPB-216ENST00000638448 ZNF818PQ6ZRF7 136 aa0.62□□□□□ -2.31
GYPB-216ENST00000638448 SPTBP11277 2137 aa0.62□□□□□ -2.31
GYPB-216ENST00000638448 DLEC1Q9Y238 1755 aa0.62□□□□□ -2.31
GYPB-216ENST00000638448 FBN2P35556 2912 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 ZNF518AQ6AHZ1 1483 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 KIAA0100Q14667 2235 aaKnown RBP0.61□□□□□ -2.31
GYPB-216ENST00000638448 A0A087WTM6 91 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 PIGBOS1A0A0B4J2F0 54 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 GNG7O60262 68 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 LY6G6CO95867 125 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 CCL8P80075 99 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 C6orf52Q5T4I8 152 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 FAM74A4Q5TZK3 123 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 C12orf73Q69YU5 71 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 RPL7L1Q6DKI1 246 aaKnown RBP0.61□□□□□ -2.31
GYPB-216ENST00000638448 SPATA8Q6RVD6 105 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 COX7B2Q8TF08 81 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 NAA60Q9H7X0 242 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 CFTRP13569 1480 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 IFT140Q96RY7 1462 aa0.61□□□□□ -2.31
GYPB-216ENST00000638448 IBTKQ9P2D0 1353 aaPredicted RBP0.6□□□□□ -2.31
GYPB-216ENST00000638448 ZNF142P52746 1687 aaPredicted RBP0.6□□□□□ -2.31
GYPB-216ENST00000638448 TRBV7-1A0A0A6YYK4 115 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 FAM25AB3EWG3 89 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 FAM25CB3EWG5 89 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 FAM25GB3EWG6 89 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 SNCGO76070 127 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 TFF1P04155 84 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 UBE2D1P51668 147 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 UBE2G1P62253 170 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 MEIG1Q5JSS6 88 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 Q6AWC8 147 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 KRTAP5-10Q6L8G5 202 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 KRTAP19-3Q7Z4W3 81 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 C20orf197Q8N268 126 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.6□□□□□ -2.31
GYPB-216ENST00000638448 PDCD10Q9BUL8 212 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 SERP1Q9Y6X1 66 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 NOTCH1P46531 2555 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 KDM6BO15054 1643 aa0.6□□□□□ -2.31
GYPB-216ENST00000638448 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
GYPB-216ENST00000638448 PLXNA2O75051 1894 aa0.59□□□□□ -2.31
GYPB-216ENST00000638448 SEC11CQ9BY50 192 aa0.59□□□□□ -2.31
GYPB-216ENST00000638448 RREB1Q92766 1687 aa0.59□□□□□ -2.32
GYPB-216ENST00000638448 ZNF462Q96JM2 2506 aa0.58□□□□□ -2.32
GYPB-216ENST00000638448 TRBV10-3A0A0K0K1G6 114 aa0.58□□□□□ -2.32
GYPB-216ENST00000638448 SPAARA0A1B0GVQ0 90 aa0.58□□□□□ -2.32
GYPB-216ENST00000638448 CLPSL1A2RUU4 121 aa0.58□□□□□ -2.32
GYPB-216ENST00000638448 HIST1H1DP16402 221 aaKnown RBP0.58□□□□□ -2.32
GYPB-216ENST00000638448 Q56UQ5 140 aa0.58□□□□□ -2.32
GYPB-216ENST00000638448 C10orf82Q8WW14 230 aa0.58□□□□□ -2.32
GYPB-216ENST00000638448 BPESC1Q9GZL8 116 aa0.58□□□□□ -2.32
GYPB-216ENST00000638448 V9GYV3 84 aa0.58□□□□□ -2.32
GYPB-216ENST00000638448 TRPM7Q96QT4 1865 aa0.58□□□□□ -2.32
GYPB-216ENST00000638448 CDK13Q14004 1512 aaKnown RBP0.58□□□□□ -2.32
GYPB-216ENST00000638448 TENM3Q9P273 2699 aa0.58□□□□□ -2.32
GYPB-216ENST00000638448 LAMB1P07942 1786 aa0.57□□□□□ -2.32
GYPB-216ENST00000638448 AHNAK2Q8IVF2 5795 aa0.57□□□□□ -2.32
GYPB-216ENST00000638448 DLEU1O43261 78 aa0.57□□□□□ -2.32
GYPB-216ENST00000638448 SIX6O95475 246 aa0.57□□□□□ -2.32
GYPB-216ENST00000638448 SPINK7P58062 85 aa0.57□□□□□ -2.32
GYPB-216ENST00000638448 ESPL1Q14674 2120 aa0.57□□□□□ -2.32
GYPB-216ENST00000638448 Q5VV11 94 aa0.57□□□□□ -2.32
GYPB-216ENST00000638448 FAM103A1Q9BTL3 118 aaKnown RBP0.57□□□□□ -2.32
GYPB-216ENST00000638448 SCP2D1Q9UJQ7 156 aa0.57□□□□□ -2.32
GYPB-216ENST00000638448 ATG2AQ2TAZ0 1938 aa0.57□□□□□ -2.32
GYPB-216ENST00000638448 AKAP11Q9UKA4 1901 aa0.57□□□□□ -2.32
GYPB-216ENST00000638448 PXDNQ92626 1479 aa0.56□□□□□ -2.32
GYPB-216ENST00000638448 MBD5Q9P267 1494 aa0.56□□□□□ -2.32
GYPB-216ENST00000638448 APOC4-APOC2K7ER74 178 aa0.56□□□□□ -2.32
GYPB-216ENST00000638448 EDDM3BP56851 147 aa0.56□□□□□ -2.32
GYPB-216ENST00000638448 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.56□□□□□ -2.32
GYPB-216ENST00000638448 PP6455Q8WZ26 134 aa0.56□□□□□ -2.32
GYPB-216ENST00000638448 LSM10Q969L4 123 aaKnown RBP0.56□□□□□ -2.32
GYPB-216ENST00000638448 Q96NJ1 140 aa0.56□□□□□ -2.32
GYPB-216ENST00000638448 C2orf88Q9BSF0 95 aa0.56□□□□□ -2.32
GYPB-216ENST00000638448 SPANXDQ9BXN6 97 aa0.56□□□□□ -2.32
GYPB-216ENST00000638448 PLAC8Q9NZF1 115 aa0.56□□□□□ -2.32
GYPB-216ENST00000638448 VIRMAQ69YN4 1812 aaKnown RBP0.56□□□□□ -2.32
GYPB-216ENST00000638448 ROCK2O75116 1388 aaKnown RBP0.56□□□□□ -2.32
GYPB-216ENST00000638448 WDR7Q9Y4E6 1490 aa0.55□□□□□ -2.32
GYPB-216ENST00000638448 GVQW2A0A096LPI5 108 aaPredicted RBP0.55□□□□□ -2.32
GYPB-216ENST00000638448 F2Z2F3 143 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms