RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 LINC00322Q6ZN03 302 aaPredicted RBP11.05□□□□□ -0.64
SCARB2-208ENST00000638372 GTSF1LQ9H1H1 148 aa11.05□□□□□ -0.64
SCARB2-208ENST00000638372 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-208ENST00000638372 IGKV2-29A2NJV5 120 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-208ENST00000638372 ANKRD39Q53RE8 183 aa11.04□□□□□ -0.64
SCARB2-208ENST00000638372 KIR2DL5BA0A0G2JN68 375 aa11.04□□□□□ -0.64
SCARB2-208ENST00000638372 KIR2DL5BA0A0G2JPC4 375 aa11.04□□□□□ -0.64
SCARB2-208ENST00000638372 NXPH4O95158 308 aa11.04□□□□□ -0.64
SCARB2-208ENST00000638372 KIR2DL5AQ8N109 375 aa11.04□□□□□ -0.64
SCARB2-208ENST00000638372 C9orf118A6NHY6 69 aa11.04□□□□□ -0.64
SCARB2-208ENST00000638372 SPAG8Q99932 426 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-208ENST00000638372 CLPSL2Q6UWE3 100 aa11.04□□□□□ -0.64
SCARB2-208ENST00000638372 UBE2DNLQ8IWF7 75 aa11.04□□□□□ -0.64
SCARB2-208ENST00000638372 C2orf70A6NJV1 201 aa11.03□□□□□ -0.64
SCARB2-208ENST00000638372 TTTY13Q9BZ97 58 aa11.03□□□□□ -0.64
SCARB2-208ENST00000638372 SPINK8P0C7L1 97 aa11.03□□□□□ -0.64
SCARB2-208ENST00000638372 AMTNQ6UX39 209 aa11.03□□□□□ -0.64
SCARB2-208ENST00000638372 Q8N1Y9 231 aa11.03□□□□□ -0.64
SCARB2-208ENST00000638372 RANBP2P49792 3224 aaKnown RBP11.03□□□□□ -0.64
SCARB2-208ENST00000638372 ODF3BA8MYP8 253 aa11.03□□□□□ -0.64
SCARB2-208ENST00000638372 SUMO4Q6EEV6 95 aa11.02□□□□□ -0.64
SCARB2-208ENST00000638372 LURAP1LQ8IV03 231 aa11.02□□□□□ -0.64
SCARB2-208ENST00000638372 CCDC140Q96MF4 163 aa11.02□□□□□ -0.64
SCARB2-208ENST00000638372 OCIAD2Q56VL3 154 aa11.02□□□□□ -0.65
SCARB2-208ENST00000638372 C19orf71A6NCJ1 209 aa11.02□□□□□ -0.65
SCARB2-208ENST00000638372 IGLV2-8P01709 118 aa11.02□□□□□ -0.65
SCARB2-208ENST00000638372 A0A0J9YY99 117 aa11.01□□□□□ -0.65
SCARB2-208ENST00000638372 C9orf47Q6ZRZ4 202 aa11.01□□□□□ -0.65
SCARB2-208ENST00000638372 ZNF80P51504 273 aaPredicted RBP11.01□□□□□ -0.65
SCARB2-208ENST00000638372 LAMTOR3Q9UHA4 124 aa11.01□□□□□ -0.65
SCARB2-208ENST00000638372 GHRHP01286 108 aa11□□□□□ -0.65
SCARB2-208ENST00000638372 SRSF2Q01130 221 aaKnown RBP11□□□□□ -0.65
SCARB2-208ENST00000638372 GPHB5Q86YW7 130 aa11□□□□□ -0.65
SCARB2-208ENST00000638372 TMEM61Q8N0U2 210 aa11□□□□□ -0.65
SCARB2-208ENST00000638372 ACANP16112 2415 aa11□□□□□ -0.65
SCARB2-208ENST00000638372 FGF6P10767 208 aa11□□□□□ -0.65
SCARB2-208ENST00000638372 CEND1Q8N111 149 aa11□□□□□ -0.65
SCARB2-208ENST00000638372 A6NDX4 124 aa11□□□□□ -0.65
SCARB2-208ENST00000638372 H3BMG7 143 aa11□□□□□ -0.65
SCARB2-208ENST00000638372 ANGP03950 147 aaKnown RBP11□□□□□ -0.65
SCARB2-208ENST00000638372 GAGE2BQ13066 116 aa11□□□□□ -0.65
SCARB2-208ENST00000638372 GAGE2EQ4V326 116 aa11□□□□□ -0.65
SCARB2-208ENST00000638372 GAGE2DQ9UEU5 116 aa11□□□□□ -0.65
SCARB2-208ENST00000638372 APOC4P55056 127 aa10.99□□□□□ -0.65
SCARB2-208ENST00000638372 RPL39P62891 51 aaKnown RBP10.99□□□□□ -0.65
SCARB2-208ENST00000638372 K7EMT4 169 aa10.99□□□□□ -0.65
SCARB2-208ENST00000638372 LINC01545Q5VT33 79 aa10.99□□□□□ -0.65
SCARB2-208ENST00000638372 ZNF48Q96MX3 618 aaPredicted RBP10.99□□□□□ -0.65
SCARB2-208ENST00000638372 PRORYQ9H606 182 aa10.99□□□□□ -0.65
SCARB2-208ENST00000638372 PRO1854Q9UHT4 67 aa10.99□□□□□ -0.65
SCARB2-208ENST00000638372 A0A0J9YXV3 536 aa10.98□□□□□ -0.65
SCARB2-208ENST00000638372 PSCAO43653 123 aa10.98□□□□□ -0.65
SCARB2-208ENST00000638372 CTRLP40313 264 aa10.98□□□□□ -0.65
SCARB2-208ENST00000638372 RHOHQ15669 191 aa10.98□□□□□ -0.65
SCARB2-208ENST00000638372 LRP4O75096 1905 aa10.98□□□□□ -0.65
SCARB2-208ENST00000638372 ZFP2Q6ZN57 461 aa10.98□□□□□ -0.65
SCARB2-208ENST00000638372 ANAPC13Q9BS18 74 aa10.97□□□□□ -0.65
SCARB2-208ENST00000638372 CDSNQ15517 529 aa10.97□□□□□ -0.65
SCARB2-208ENST00000638372 A0A1W2PPM0 123 aa10.97□□□□□ -0.65
SCARB2-208ENST00000638372 ZNF561-AS1K7EIQ3 104 aa10.97□□□□□ -0.65
SCARB2-208ENST00000638372 K7EMI3 77 aa10.97□□□□□ -0.65
SCARB2-208ENST00000638372 K7EP13 123 aa10.97□□□□□ -0.65
SCARB2-208ENST00000638372 MDFICQ9P1T7 246 aa10.97□□□□□ -0.65
SCARB2-208ENST00000638372 C5orf42Q9H799 3197 aa10.97□□□□□ -0.65
SCARB2-208ENST00000638372 ESM1Q9NQ30 184 aa10.97□□□□□ -0.65
SCARB2-208ENST00000638372 TNFRSF13BO14836 293 aaPredicted RBP10.96□□□□□ -0.65
SCARB2-208ENST00000638372 XCL1P47992 114 aa10.96□□□□□ -0.65
SCARB2-208ENST00000638372 HERVK_113P63121 156 aa10.96□□□□□ -0.65
SCARB2-208ENST00000638372 C12orf74Q32Q52 190 aa10.96□□□□□ -0.65
SCARB2-208ENST00000638372 MLST8Q9BVC4 326 aa10.96□□□□□ -0.65
SCARB2-208ENST00000638372 LOXL1Q08397 574 aaPredicted RBP10.96□□□□□ -0.66
SCARB2-208ENST00000638372 CRYGBP07316 175 aa10.96□□□□□ -0.66
SCARB2-208ENST00000638372 GDF5OSQ5U4N7 250 aa10.96□□□□□ -0.66
SCARB2-208ENST00000638372 CHD7Q9P2D1 2997 aa10.95□□□□□ -0.66
SCARB2-208ENST00000638372 TRBV20-1A0A075B6N2 111 aa10.95□□□□□ -0.66
SCARB2-208ENST00000638372 SIVA1O15304 175 aa10.95□□□□□ -0.66
SCARB2-208ENST00000638372 CCL25O15444 150 aa10.95□□□□□ -0.66
SCARB2-208ENST00000638372 C5orf38Q86SI9 138 aa10.95□□□□□ -0.66
SCARB2-208ENST00000638372 CITED2Q99967 270 aaPredicted RBP10.95□□□□□ -0.66
SCARB2-208ENST00000638372 K7EP34 96 aa10.95□□□□□ -0.66
SCARB2-208ENST00000638372 LY6LH3BQJ8 138 aa10.94□□□□□ -0.66
SCARB2-208ENST00000638372 Q6ZQT7 251 aa10.94□□□□□ -0.66
SCARB2-208ENST00000638372 Q9H8V8 135 aa10.94□□□□□ -0.66
SCARB2-208ENST00000638372 A0A1B0GXF2 115 aa10.94□□□□□ -0.66
SCARB2-208ENST00000638372 PIFOQ8TCI5 191 aa10.94□□□□□ -0.66
SCARB2-208ENST00000638372 A0A0J9YX75 114 aa10.93□□□□□ -0.66
SCARB2-208ENST00000638372 TAL2Q16559 108 aa10.93□□□□□ -0.66
SCARB2-208ENST00000638372 HIST1H4AP62805 103 aaKnown RBP10.93□□□□□ -0.66
SCARB2-208ENST00000638372 C11orf71Q6IPW1 123 aa10.93□□□□□ -0.66
SCARB2-208ENST00000638372 DEFB125Q8N687 156 aa10.93□□□□□ -0.66
SCARB2-208ENST00000638372 IGF1P05019 195 aa10.93□□□□□ -0.66
SCARB2-208ENST00000638372 GAGE2AQ6NT46 116 aa10.93□□□□□ -0.66
SCARB2-208ENST00000638372 TRBV6-1A0A0K0K1D8 114 aa10.92□□□□□ -0.66
SCARB2-208ENST00000638372 ZFAND6Q6FIF0 208 aa10.92□□□□□ -0.66
SCARB2-208ENST00000638372 IGHG4P01861 327 aa10.92□□□□□ -0.66
SCARB2-208ENST00000638372 C10orf99Q6UWK7 81 aa10.92□□□□□ -0.66
SCARB2-208ENST00000638372 MRAPQ8TCY5 172 aa10.92□□□□□ -0.66
SCARB2-208ENST00000638372 FSTL3O95633 263 aa10.91□□□□□ -0.66
SCARB2-208ENST00000638372 WFDC11Q8NEX6 87 aa10.91□□□□□ -0.66
SCARB2-208ENST00000638372 EBI3Q14213 229 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms