RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	ZNF664	Q8N3J9	261 aa		4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	OR4C5	Q8NGB2	326 aa		4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	OR2T35	Q8NGX2	323 aa		4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	NUDT11	Q96G61	164 aa		4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	SGK494	Q96LW2	274 aa		4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	YPEL4	Q96NS1	127 aa		4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	AQP10	Q96PS8	301 aa		4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	C11orf21	Q9P2W6	132 aa		4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	LY96	Q9Y6Y9	160 aa		4.95	□□□□□ -1.62
CACNA1A-222	ENST00000636022	FLG2	Q5D862	2391 aa	Predicted RBP	4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	TRAV9-2	A0A087WT02	112 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022		A0A087WTM6	91 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	LOC100131303	A0A0U1RQF7	123 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	GGTLC3	B5MD39	225 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022		C9JCJ5	164 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	IGLV2-11	P01706	119 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	TCRA	P04437	139 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	GATA1	P15976	413 aa	Predicted RBP	4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ATP6V0C	P27449	155 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	S100A2	P29034	98 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	GCHFR	P30047	84 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	CDC34	P49427	236 aa	Predicted RBP	4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	FHIT	P49789	147 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ERVFC1-1	P60608	527 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	RPS20	P60866	119 aa	Known RBP	4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	SERF2	P84101	59 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	JOSD1	Q15040	202 aa	Predicted RBP	4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	DPPA3	Q6W0C5	159 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	C5orf17	Q8NAS9	161 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ASB13	Q8WXK3	278 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	KCNS1	Q96KK3	526 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	TXNDC17	Q9BRA2	123 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	PSMG3	Q9BT73	122 aa	Predicted RBP	4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	PRO1933	Q9H354	126 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	SDF2L1	Q9HCN8	221 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	MSRB1	Q9NZV6	116 aa		4.94	□□□□□ -1.62
CACNA1A-222	ENST00000636022	RS1	O15537	224 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	RAB5A	P20339	215 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	EVI2A	P22794	236 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	XG	P55808	180 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ZNF876P	Q49A33	203 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	CFAP126	Q5VTH2	177 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	SH2D6	Q7Z4S9	175 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	HIST3H2BB	Q8N257	126 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	SLC25A29	Q8N8R3	303 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	PTH2	Q96A98	100 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	PACRG	Q96M98	296 aa	Predicted RBP	4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	C9orf85	Q96MD7	179 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	SH3BGRL3	Q9H299	93 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	EPDR1	Q9UM22	224 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	PSG8	Q9UQ74	426 aa		4.93	□□□□□ -1.62
CACNA1A-222	ENST00000636022	LRCOL1	A6NCL2	159 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	RNF222	A6NCQ9	220 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	FBLL1	A6NHQ2	334 aa	Known RBP	4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	TAAR5	O14804	337 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	CXorf1	O96002	111 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	GCG	P01275	180 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	CRYGD	P07320	174 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	PFN1	P07737	140 aa	Known RBP	4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	RNASE3	P12724	160 aa	Known RBP	4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	FGF8	P55075	233 aa	Predicted RBP	4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	KRTAP10-1	P60331	282 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	SUMO1	P63165	101 aa	Known RBP	4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	LINC01556	Q5JQF7	62 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	C10orf126	Q8N4M7	172 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	TMEM75	Q8N9X5	138 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	OR10D4P	Q8NGN7	298 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	NDFIP1	Q9BT67	221 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	TMEM167B	Q9NRX6	74 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	TNFSF18	Q9UNG2	199 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ZFP30	Q9Y2G7	519 aa		4.92	□□□□□ -1.62
CACNA1A-222	ENST00000636022	IGKV3D-20	A0A0C4DH25	116 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	IGHV3-38	A0A0C4DH36	116 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	TRBV6-4	A0A1B0GX49	114 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022		A0A1W2PRE2	83 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	PGPEP1L	A6NFU8	196 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022		K7EQM0	130 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ZNF726P1	Q15940	193 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ZNF674	Q2M3X9	581 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ZNF506	Q5JVG8	444 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	RPL7L1	Q6DKI1	246 aa	Known RBP	4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	PRNT	Q86SH4	94 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	LINC01551	Q86U37	167 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	CYB561D1	Q8N8Q1	229 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	NHLRC2	Q8NBF2	726 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	ORAOV1	Q8WV07	137 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	LINC00479	Q96M42	142 aa		4.91	□□□□□ -1.62
CACNA1A-222	ENST00000636022	PKHD1L1	Q86WI1	4243 aa		4.9	□□□□□ -1.62
CACNA1A-222	ENST00000636022	IGHV3-73	A0A0B4J1V6	119 aa		4.9	□□□□□ -1.63
CACNA1A-222	ENST00000636022		A0A0D9SG52	128 aa		4.9	□□□□□ -1.63
CACNA1A-222	ENST00000636022	IBA57-AS1	B1ANH7	110 aa		4.9	□□□□□ -1.63
CACNA1A-222	ENST00000636022	CEBPG	P53567	150 aa		4.9	□□□□□ -1.63
CACNA1A-222	ENST00000636022	EIF5A	P63241	154 aa	Known RBP	4.9	□□□□□ -1.63
CACNA1A-222	ENST00000636022	RHOH	Q15669	191 aa		4.9	□□□□□ -1.63
CACNA1A-222	ENST00000636022	UFSP1	Q6NVU6	142 aa		4.9	□□□□□ -1.63
CACNA1A-222	ENST00000636022		Q6ZSN1	163 aa		4.9	□□□□□ -1.63
CACNA1A-222	ENST00000636022	TRAV8-6	A0A0B4J262	113 aa		4.89	□□□□□ -1.63
CACNA1A-222	ENST00000636022	TRAV34	A0A0B4J273	112 aa		4.89	□□□□□ -1.63
CACNA1A-222	ENST00000636022	CTXND1	A0A1B0GTU2	59 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms