RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 A0A096LPF7 62 aa10.67□□□□□ -0.7
SNRNP48-203ENST00000634363 IGHV3-73A0A0B4J1V6 119 aa10.67□□□□□ -0.7
SNRNP48-203ENST00000634363 SRP19P09132 144 aaKnown RBP10.67□□□□□ -0.7
SNRNP48-203ENST00000634363 BTF3P20290 206 aaKnown RBP10.67□□□□□ -0.7
SNRNP48-203ENST00000634363 FUSP35637 526 aaKnown RBP eCLIP10.67□□□□□ -0.7
SNRNP48-203ENST00000634363 PEA15Q15121 130 aa10.67□□□□□ -0.7
SNRNP48-203ENST00000634363 MRPL23Q16540 153 aaKnown RBP10.67□□□□□ -0.7
SNRNP48-203ENST00000634363 OCC1Q8TAD7 63 aa10.67□□□□□ -0.7
SNRNP48-203ENST00000634363 ZNF727A8MUV8 499 aa10.66□□□□□ -0.7
SNRNP48-203ENST00000634363 EPM2AB3EWF7 344 aa10.66□□□□□ -0.7
SNRNP48-203ENST00000634363 K7EN84 100 aa10.66□□□□□ -0.7
SNRNP48-203ENST00000634363 RHODO00212 210 aa10.66□□□□□ -0.7
SNRNP48-203ENST00000634363 OR5AL1P0C617 328 aa10.66□□□□□ -0.7
SNRNP48-203ENST00000634363 GYPEP15421 78 aa10.66□□□□□ -0.7
SNRNP48-203ENST00000634363 GATA1P15976 413 aaPredicted RBP10.66□□□□□ -0.7
SNRNP48-203ENST00000634363 SRIP30626 198 aa10.66□□□□□ -0.7
SNRNP48-203ENST00000634363 LINC00315P59091 139 aa10.66□□□□□ -0.7
SNRNP48-203ENST00000634363 ZFP2Q6ZN57 461 aa10.66□□□□□ -0.7
SNRNP48-203ENST00000634363 PRADC1Q9BSG0 188 aa10.66□□□□□ -0.7
SNRNP48-203ENST00000634363 TPPP3Q9BW30 176 aa10.66□□□□□ -0.7
SNRNP48-203ENST00000634363 SNAI2O43623 268 aa10.65□□□□□ -0.7
SNRNP48-203ENST00000634363 GZMBP10144 247 aa10.65□□□□□ -0.7
SNRNP48-203ENST00000634363 RHOHQ15669 191 aa10.65□□□□□ -0.7
SNRNP48-203ENST00000634363 FAM74A4Q5TZK3 123 aa10.65□□□□□ -0.7
SNRNP48-203ENST00000634363 SPANXN1Q5VSR9 72 aa10.65□□□□□ -0.7
SNRNP48-203ENST00000634363 FER1L6-AS1Q8NA97 138 aa10.65□□□□□ -0.7
SNRNP48-203ENST00000634363 NUDT10Q8NFP7 164 aa10.65□□□□□ -0.7
SNRNP48-203ENST00000634363 OR10AG1Q8NH19 301 aa10.65□□□□□ -0.7
SNRNP48-203ENST00000634363 NUDT11Q96G61 164 aa10.65□□□□□ -0.7
SNRNP48-203ENST00000634363 LY96Q9Y6Y9 160 aa10.65□□□□□ -0.7
SNRNP48-203ENST00000634363 TRBV6-4A0A1B0GX49 114 aa10.64□□□□□ -0.71
SNRNP48-203ENST00000634363 K7EQD1 137 aa10.64□□□□□ -0.71
SNRNP48-203ENST00000634363 NEGR1Q7Z3B1 354 aa10.64□□□□□ -0.71
SNRNP48-203ENST00000634363 SLC25A29Q8N8R3 303 aa10.64□□□□□ -0.71
SNRNP48-203ENST00000634363 SFRP2Q96HF1 295 aa10.64□□□□□ -0.71
SNRNP48-203ENST00000634363 SSBP4Q9BWG4 385 aaPredicted RBP10.64□□□□□ -0.71
SNRNP48-203ENST00000634363 RNASE7Q9H1E1 156 aaKnown RBP10.64□□□□□ -0.71
SNRNP48-203ENST00000634363 SMDT1Q9H4I9 107 aa10.64□□□□□ -0.71
SNRNP48-203ENST00000634363 RPP21Q9H633 154 aaKnown RBP10.64□□□□□ -0.71
SNRNP48-203ENST00000634363 JPT2Q9H910 190 aa10.64□□□□□ -0.71
SNRNP48-203ENST00000634363 A0A087WWL8 130 aa10.63□□□□□ -0.71
SNRNP48-203ENST00000634363 MUC21A0A0G2JKD1 596 aa10.63□□□□□ -0.71
SNRNP48-203ENST00000634363 MUC21A0A140T8X8 626 aa10.63□□□□□ -0.71
SNRNP48-203ENST00000634363 EREGO14944 169 aa10.63□□□□□ -0.71
SNRNP48-203ENST00000634363 SIVA1O15304 175 aa10.63□□□□□ -0.71
SNRNP48-203ENST00000634363 NXPH4O95158 308 aa10.63□□□□□ -0.71
SNRNP48-203ENST00000634363 FAM74A3Q4VXF1 159 aa10.63□□□□□ -0.71
SNRNP48-203ENST00000634363 SAMD10Q9BYL1 202 aa10.63□□□□□ -0.71
SNRNP48-203ENST00000634363 TNFRSF18Q9Y5U5 241 aa10.63□□□□□ -0.71
SNRNP48-203ENST00000634363 LOC100131303A0A0U1RQF7 123 aa10.62□□□□□ -0.71
SNRNP48-203ENST00000634363 IGLC6P0CF74 106 aa10.62□□□□□ -0.71
SNRNP48-203ENST00000634363 ERVFC1-1P60608 527 aa10.62□□□□□ -0.71
SNRNP48-203ENST00000634363 SSTP61278 116 aa10.62□□□□□ -0.71
SNRNP48-203ENST00000634363 SH2D6Q7Z4S9 175 aa10.62□□□□□ -0.71
SNRNP48-203ENST00000634363 PGPEP1Q9NXJ5 209 aa10.62□□□□□ -0.71
SNRNP48-203ENST00000634363 F2Z2F3 143 aa10.61□□□□□ -0.71
SNRNP48-203ENST00000634363 GATCO43716 136 aaKnown RBP10.61□□□□□ -0.71
SNRNP48-203ENST00000634363 INAFM2P0DMQ5 153 aa10.61□□□□□ -0.71
SNRNP48-203ENST00000634363 CACNG7P62955 275 aa10.61□□□□□ -0.71
SNRNP48-203ENST00000634363 SRSF3P84103 164 aaKnown RBP10.61□□□□□ -0.71
SNRNP48-203ENST00000634363 FAM231DQ6ZW35 169 aa10.61□□□□□ -0.71
SNRNP48-203ENST00000634363 LINC01551Q86U37 167 aa10.61□□□□□ -0.71
SNRNP48-203ENST00000634363 AP1S3Q96PC3 154 aa10.61□□□□□ -0.71
SNRNP48-203ENST00000634363 C9JQL5 133 aa10.6□□□□□ -0.71
SNRNP48-203ENST00000634363 SMIM17P0DL12 118 aa10.6□□□□□ -0.71
SNRNP48-203ENST00000634363 TMEM241Q24JQ0 296 aa10.6□□□□□ -0.71
SNRNP48-203ENST00000634363 LCE2DQ5TA82 110 aaPredicted RBP10.6□□□□□ -0.71
SNRNP48-203ENST00000634363 UFSP1Q6NVU6 142 aa10.6□□□□□ -0.71
SNRNP48-203ENST00000634363 Q6ZRN7 208 aaPredicted RBP10.6□□□□□ -0.71
SNRNP48-203ENST00000634363 CRYGDP07320 174 aa10.59□□□□□ -0.71
SNRNP48-203ENST00000634363 ZNF56Q15929 161 aa10.59□□□□□ -0.71
SNRNP48-203ENST00000634363 CLLU1Q5K131 121 aa10.59□□□□□ -0.71
SNRNP48-203ENST00000634363 NAT8Q9UHE5 227 aa10.59□□□□□ -0.71
SNRNP48-203ENST00000634363 A8MWL6 223 aa10.58□□□□□ -0.72
SNRNP48-203ENST00000634363 CTRLP40313 264 aa10.58□□□□□ -0.72
SNRNP48-203ENST00000634363 ADIRFQ15847 76 aa10.58□□□□□ -0.72
SNRNP48-203ENST00000634363 CT83Q5H943 113 aa10.58□□□□□ -0.72
SNRNP48-203ENST00000634363 LYPD5Q6UWN5 251 aa10.58□□□□□ -0.72
SNRNP48-203ENST00000634363 LYZL1Q6UWQ5 148 aa10.58□□□□□ -0.72
SNRNP48-203ENST00000634363 Q6ZSN1 163 aa10.58□□□□□ -0.72
SNRNP48-203ENST00000634363 C15orf54Q8N8G6 183 aa10.58□□□□□ -0.72
SNRNP48-203ENST00000634363 LRP1BQ9NZR2 4599 aa10.57□□□□□ -0.72
SNRNP48-203ENST00000634363 XGP55808 180 aa10.57□□□□□ -0.72
SNRNP48-203ENST00000634363 IFITM2Q01629 132 aa10.57□□□□□ -0.72
SNRNP48-203ENST00000634363 C14orf178Q8N769 122 aaPredicted RBP10.57□□□□□ -0.72
SNRNP48-203ENST00000634363 GAGE12JA6NER3 117 aa10.56□□□□□ -0.72
SNRNP48-203ENST00000634363 F5H697 171 aa10.56□□□□□ -0.72
SNRNP48-203ENST00000634363 TRGC1P0CF51 173 aa10.56□□□□□ -0.72
SNRNP48-203ENST00000634363 DNAH10OSP0CZ25 163 aa10.56□□□□□ -0.72
SNRNP48-203ENST00000634363 RAB4BP61018 213 aa10.56□□□□□ -0.72
SNRNP48-203ENST00000634363 RPL23P62829 140 aaKnown RBP10.56□□□□□ -0.72
SNRNP48-203ENST00000634363 GAGE1Q13065 139 aa10.56□□□□□ -0.72
SNRNP48-203ENST00000634363 GAGE4Q13068 117 aa10.56□□□□□ -0.72
SNRNP48-203ENST00000634363 GAGE5Q13069 117 aa10.56□□□□□ -0.72
SNRNP48-203ENST00000634363 GAGE13Q4V321 117 aa10.56□□□□□ -0.72
SNRNP48-203ENST00000634363 FRZBQ92765 325 aa10.56□□□□□ -0.72
SNRNP48-203ENST00000634363 ISOC2Q96AB3 205 aa10.56□□□□□ -0.72
SNRNP48-203ENST00000634363 OSTCQ9NRP0 149 aa10.56□□□□□ -0.72
SNRNP48-203ENST00000634363 Q5VSD8 79 aa10.55□□□□□ -0.72
SNRNP48-203ENST00000634363 WDR73Q6P4I2 378 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms