RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 DNAJC9-AS1A6NH13 148 aa5.65□□□□□ -1.51
PKP4-217ENST00000628904 DEFB130BP0DP73 79 aa5.65□□□□□ -1.51
PKP4-217ENST00000628904 DEFB130AP0DP74 79 aa5.65□□□□□ -1.51
PKP4-217ENST00000628904 CDKN1BP46527 198 aa5.65□□□□□ -1.51
PKP4-217ENST00000628904 SMIM12Q96EX1 92 aa5.65□□□□□ -1.51
PKP4-217ENST00000628904 TRGV2A0A075B6R0 118 aa5.65□□□□□ -1.51
PKP4-217ENST00000628904 LINC01619G3V211 115 aa5.65□□□□□ -1.51
PKP4-217ENST00000628904 SUMO2P61956 95 aaKnown RBP5.65□□□□□ -1.51
PKP4-217ENST00000628904 ZNF418Q8TF45 676 aaPredicted RBP5.65□□□□□ -1.51
PKP4-217ENST00000628904 HIST1H4GQ99525 98 aa5.65□□□□□ -1.51
PKP4-217ENST00000628904 DPH3P1Q9H4G8 78 aa5.65□□□□□ -1.51
PKP4-217ENST00000628904 ST20Q9HBF5 79 aa5.65□□□□□ -1.51
PKP4-217ENST00000628904 FAM231BA6NCW3 169 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 H3BUT2 72 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 ZFAND2AQ8N6M9 145 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 NHP2Q9NX24 153 aaKnown RBP5.64□□□□□ -1.51
PKP4-217ENST00000628904 SDHAF1A6NFY7 115 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 NPIPB6E9PJ23 425 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 APOMO95445 188 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 LGALS1P09382 135 aaKnown RBP5.64□□□□□ -1.51
PKP4-217ENST00000628904 PSMB8P28062 276 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 C2orf66Q6UXQ4 117 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 CYSLTR1Q9Y271 337 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 TP53TG1Q9Y2A0 90 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 K7ERJ3 54 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 TMEM97Q5BJF2 176 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 PET117Q6UWS5 81 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 GPHB5Q86YW7 130 aa5.64□□□□□ -1.51
PKP4-217ENST00000628904 ZNF625Q96I27 306 aaPredicted RBP5.64□□□□□ -1.51
PKP4-217ENST00000628904 NXT2Q9NPJ8 142 aaKnown RBP5.64□□□□□ -1.51
PKP4-217ENST00000628904 PRSS29PA6NIE9 313 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 CCL24O00175 119 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 PLA2G2AP14555 144 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 Q6ZSV7 163 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 SYT8Q8NBV8 401 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 PEMTQ9UBM1 199 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 TNFRSF18Q9Y5U5 241 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 A0A1B0GW15 77 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 DUSP14O95147 198 aaKnown RBP5.63□□□□□ -1.51
PKP4-217ENST00000628904 IGKCP01834 107 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 AMMECR1LQ6DCA0 310 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 C20orf144Q9BQM9 153 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 ZNF702PQ9H963 129 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 KIR2DL5BA0A0G2JN68 375 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 KIR2DL5BA0A0G2JPC4 375 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 INAFM1C9JVW0 142 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 KLF5Q13887 457 aaPredicted RBP5.63□□□□□ -1.51
PKP4-217ENST00000628904 RRN3P1Q2M238 152 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 Q6YL49 198 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 KIR2DL5AQ8N109 375 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 OR9G4Q8NGQ1 327 aa5.63□□□□□ -1.51
PKP4-217ENST00000628904 HIVEP1P15822 2718 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 IGHV1OR15-1A0A075B7D0 117 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 CD5LO43866 347 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 PPBPP02775 128 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 IGLC6P0CF74 106 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 RPL24P83731 157 aaKnown RBP5.62□□□□□ -1.51
PKP4-217ENST00000628904 C9orf47Q6ZRZ4 202 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 GATD1Q8NB37 220 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 RNF185Q96GF1 192 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 LOC107984156A0A0G2JMH3 177 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 OR11H12B2RN74 326 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 ARL17AQ8IVW1 177 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 Q8N976 141 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 OR11H2Q8NH07 326 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 GAGE12BA1L429 117 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 GAGE7O76087 117 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 GAGE12FP0CL80 117 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 GAGE12GP0CL81 117 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 GAGE12IP0CL82 117 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 Q1RN00 199 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 SPXQ9BT56 116 aa5.62□□□□□ -1.51
PKP4-217ENST00000628904 DPM2O94777 84 aa5.61□□□□□ -1.51
PKP4-217ENST00000628904 ELANEP08246 267 aa5.61□□□□□ -1.51
PKP4-217ENST00000628904 SMIM2Q9BVW6 85 aa5.61□□□□□ -1.51
PKP4-217ENST00000628904 SUMO4Q6EEV6 95 aa5.61□□□□□ -1.51
PKP4-217ENST00000628904 CFAP161Q6P656 301 aa5.61□□□□□ -1.51
PKP4-217ENST00000628904 ADAMTSL5Q6ZMM2 481 aa5.61□□□□□ -1.51
PKP4-217ENST00000628904 C11orf68Q9H3H3 251 aaKnown RBP5.61□□□□□ -1.51
PKP4-217ENST00000628904 Q9UF83 564 aa5.61□□□□□ -1.51
PKP4-217ENST00000628904 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.61□□□□□ -1.51
PKP4-217ENST00000628904 IGKV2D-26A0A0A0MRZ7 120 aa5.61□□□□□ -1.51
PKP4-217ENST00000628904 IGKV2-29A2NJV5 120 aaPredicted RBP5.61□□□□□ -1.51
PKP4-217ENST00000628904 IGLV1-40P01703 118 aa5.61□□□□□ -1.51
PKP4-217ENST00000628904 CTRLP40313 264 aa5.61□□□□□ -1.51
PKP4-217ENST00000628904 GAGE12JA6NER3 117 aa5.6□□□□□ -1.51
PKP4-217ENST00000628904 J3QLI3 93 aa5.6□□□□□ -1.51
PKP4-217ENST00000628904 CIDEAO60543 219 aa5.6□□□□□ -1.51
PKP4-217ENST00000628904 GAGE4Q13068 117 aa5.6□□□□□ -1.51
PKP4-217ENST00000628904 GAGE5Q13069 117 aa5.6□□□□□ -1.51
PKP4-217ENST00000628904 GAGE13Q4V321 117 aa5.6□□□□□ -1.51
PKP4-217ENST00000628904 C12orf54Q6X4T0 127 aa5.6□□□□□ -1.51
PKP4-217ENST00000628904 DCANP1Q8TF63 244 aa5.6□□□□□ -1.51
PKP4-217ENST00000628904 TOMM7Q9P0U1 55 aa5.6□□□□□ -1.51
PKP4-217ENST00000628904 TRAV13-1A0A0B4J241 112 aa5.6□□□□□ -1.51
PKP4-217ENST00000628904 A0A0J9YX75 114 aa5.6□□□□□ -1.51
PKP4-217ENST00000628904 TMEM262E9PQX1 116 aa5.6□□□□□ -1.51
PKP4-217ENST00000628904 SCGB1C2P0DMR2 95 aa5.6□□□□□ -1.51
PKP4-217ENST00000628904 RNASE3P12724 160 aaKnown RBP5.6□□□□□ -1.51
PKP4-217ENST00000628904 NOP10Q9NPE3 64 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms