RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 PTH2Q96A98 100 aa6.66□□□□□ -1.34
LINC01560-202ENST00000624822 RNASE7Q9H1E1 156 aaKnown RBP6.66□□□□□ -1.34
LINC01560-202ENST00000624822 JPT2Q9H910 190 aa6.66□□□□□ -1.34
LINC01560-202ENST00000624822 MUC21A0A0G2JKD1 596 aa6.65□□□□□ -1.34
LINC01560-202ENST00000624822 MUC21A0A140T8X8 626 aa6.65□□□□□ -1.34
LINC01560-202ENST00000624822 CIDEAO60543 219 aa6.65□□□□□ -1.34
LINC01560-202ENST00000624822 NDUFS6O75380 124 aaKnown RBP6.65□□□□□ -1.34
LINC01560-202ENST00000624822 MED14OSP0DP75 135 aa6.65□□□□□ -1.34
LINC01560-202ENST00000624822 GYPEP15421 78 aa6.65□□□□□ -1.34
LINC01560-202ENST00000624822 SRIP30626 198 aa6.65□□□□□ -1.34
LINC01560-202ENST00000624822 MRPL23Q16540 153 aaKnown RBP6.65□□□□□ -1.34
LINC01560-202ENST00000624822 RNF212Q495C1 297 aa6.65□□□□□ -1.34
LINC01560-202ENST00000624822 FER1L6-AS1Q8NA97 138 aa6.65□□□□□ -1.34
LINC01560-202ENST00000624822 NUDT10Q8NFP7 164 aa6.65□□□□□ -1.34
LINC01560-202ENST00000624822 OR10AG1Q8NH19 301 aa6.65□□□□□ -1.34
LINC01560-202ENST00000624822 NUDT11Q96G61 164 aa6.65□□□□□ -1.34
LINC01560-202ENST00000624822 IGLV2-18A0A075B6J9 118 aa6.64□□□□□ -1.35
LINC01560-202ENST00000624822 A0A087WWL8 130 aa6.64□□□□□ -1.35
LINC01560-202ENST00000624822 K7EQD1 137 aa6.64□□□□□ -1.35
LINC01560-202ENST00000624822 SNAI2O43623 268 aa6.64□□□□□ -1.35
LINC01560-202ENST00000624822 GATCO43716 136 aaKnown RBP6.64□□□□□ -1.35
LINC01560-202ENST00000624822 OR5AL1P0C617 328 aa6.64□□□□□ -1.35
LINC01560-202ENST00000624822 GATA1P15976 413 aaPredicted RBP6.64□□□□□ -1.35
LINC01560-202ENST00000624822 ERVFC1-1P60608 527 aa6.64□□□□□ -1.35
LINC01560-202ENST00000624822 SRSF3P84103 164 aaKnown RBP6.64□□□□□ -1.35
LINC01560-202ENST00000624822 RHOHQ15669 191 aa6.64□□□□□ -1.35
LINC01560-202ENST00000624822 PIK3CD-AS1Q5SR53 167 aa6.64□□□□□ -1.35
LINC01560-202ENST00000624822 ZNF575Q86XF7 245 aa6.64□□□□□ -1.35
LINC01560-202ENST00000624822 PRADC1Q9BSG0 188 aa6.64□□□□□ -1.35
LINC01560-202ENST00000624822 RPP21Q9H633 154 aaKnown RBP6.64□□□□□ -1.35
LINC01560-202ENST00000624822 SCRT2Q9NQ03 307 aa6.64□□□□□ -1.35
LINC01560-202ENST00000624822 SACSQ9NZJ4 4579 aa6.64□□□□□ -1.35
LINC01560-202ENST00000624822 LOC100131303A0A0U1RQF7 123 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 TRBV6-4A0A1B0GX49 114 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 M0R2N4 97 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 RHODO00212 210 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 ZNF56Q15929 161 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 KRTAP19-4Q3LI73 84 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 HYDINQ4G0P3 5121 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 FAM74A3Q4VXF1 159 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 ZFP2Q6ZN57 461 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 NEGR1Q7Z3B1 354 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 LINC01551Q86U37 167 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 SLC25A29Q8N8R3 303 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 SFRP2Q96HF1 295 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 SAMD10Q9BYL1 202 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 SMDT1Q9H4I9 107 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 LINC00588Q9Y4M8 146 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 LY96Q9Y6Y9 160 aa6.63□□□□□ -1.35
LINC01560-202ENST00000624822 C9JQL5 133 aa6.62□□□□□ -1.35
LINC01560-202ENST00000624822 IGLC6P0CF74 106 aa6.62□□□□□ -1.35
LINC01560-202ENST00000624822 SMIM17P0DL12 118 aa6.62□□□□□ -1.35
LINC01560-202ENST00000624822 ADIRFQ15847 76 aa6.62□□□□□ -1.35
LINC01560-202ENST00000624822 ESRGQ1W209 222 aa6.62□□□□□ -1.35
LINC01560-202ENST00000624822 TMEM241Q24JQ0 296 aa6.62□□□□□ -1.35
LINC01560-202ENST00000624822 SOHLH1Q5JUK2 328 aa6.62□□□□□ -1.35
LINC01560-202ENST00000624822 LYZL1Q6UWQ5 148 aa6.62□□□□□ -1.35
LINC01560-202ENST00000624822 FAM231DQ6ZW35 169 aa6.62□□□□□ -1.35
LINC01560-202ENST00000624822 AP1S3Q96PC3 154 aa6.62□□□□□ -1.35
LINC01560-202ENST00000624822 NAT8Q9UHE5 227 aa6.62□□□□□ -1.35
LINC01560-202ENST00000624822 RYR3Q15413 4870 aa6.61□□□□□ -1.35
LINC01560-202ENST00000624822 A0A1W2PPQ1 181 aa6.61□□□□□ -1.35
LINC01560-202ENST00000624822 F2Z2F3 143 aa6.61□□□□□ -1.35
LINC01560-202ENST00000624822 F5H697 171 aa6.61□□□□□ -1.35
LINC01560-202ENST00000624822 FAM3BP58499 235 aaPredicted RBP6.61□□□□□ -1.35
LINC01560-202ENST00000624822 CACNG7P62955 275 aa6.61□□□□□ -1.35
LINC01560-202ENST00000624822 C14orf178Q8N769 122 aaPredicted RBP6.61□□□□□ -1.35
LINC01560-202ENST00000624822 C15orf54Q8N8G6 183 aa6.61□□□□□ -1.35
LINC01560-202ENST00000624822 RYR2Q92736 4967 aa6.61□□□□□ -1.35
LINC01560-202ENST00000624822 GAGE12JA6NER3 117 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 A8MWL6 223 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 NXPH4O95158 308 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 CRYGDP07320 174 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 MGPP08493 103 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 RPL23P62829 140 aaKnown RBP6.6□□□□□ -1.35
LINC01560-202ENST00000624822 GAGE1Q13065 139 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 GAGE4Q13068 117 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 GAGE5Q13069 117 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 GAGE13Q4V321 117 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 LYPD5Q6UWN5 251 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 Q6ZSN1 163 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 SH2D6Q7Z4S9 175 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 ISOC2Q96AB3 205 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 BORCS7Q96B45 105 aa6.6□□□□□ -1.35
LINC01560-202ENST00000624822 MRPS16Q9Y3D3 137 aaKnown RBP6.6□□□□□ -1.35
LINC01560-202ENST00000624822 DNAH1Q9P2D7 4330 aa6.59□□□□□ -1.35
LINC01560-202ENST00000624822 TRGC1P0CF51 173 aa6.59□□□□□ -1.35
LINC01560-202ENST00000624822 NTF3P20783 257 aa6.59□□□□□ -1.35
LINC01560-202ENST00000624822 TWIST1Q15672 202 aa6.59□□□□□ -1.35
LINC01560-202ENST00000624822 UFSP1Q6NVU6 142 aa6.59□□□□□ -1.35
LINC01560-202ENST00000624822 ZNRF2Q8NHG8 242 aa6.59□□□□□ -1.35
LINC01560-202ENST00000624822 Q9H8V8 135 aa6.59□□□□□ -1.35
LINC01560-202ENST00000624822 OSTCQ9NRP0 149 aa6.59□□□□□ -1.35
LINC01560-202ENST00000624822 MSRB1Q9NZV6 116 aa6.59□□□□□ -1.35
LINC01560-202ENST00000624822 H3BS24 57 aa6.58□□□□□ -1.36
LINC01560-202ENST00000624822 SIVA1O15304 175 aa6.58□□□□□ -1.36
LINC01560-202ENST00000624822 CTRLP40313 264 aa6.58□□□□□ -1.36
LINC01560-202ENST00000624822 RAB4BP61018 213 aa6.58□□□□□ -1.36
LINC01560-202ENST00000624822 CT83Q5H943 113 aa6.58□□□□□ -1.36
LINC01560-202ENST00000624822 OR10G8Q8NGN5 311 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms