RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 DEFB4AO15263 64 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 ARID2Q68CP9 1835 aa4.93□□□□□ -1.62
CDKL5-205ENST00000623535 IGKV1D-37A0A075B6S9 117 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 DEFB104AQ8WTQ1 72 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 TMEM14CQ9P0S9 112 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 TET2Q6N021 2002 aaPredicted RBP4.92□□□□□ -1.62
CDKL5-205ENST00000623535 A0A0G2JRQ6 117 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 MIAQ16674 131 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 TRBV6-6A0A0A6YYG2 114 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 GTSF1LQ9H1H1 148 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 Q9H8V8 135 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 IFITM1P13164 125 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 Q6ZVH6 145 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 LINC00473A8K010 186 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 PLA2G1BP04054 148 aaKnown RBP4.92□□□□□ -1.62
CDKL5-205ENST00000623535 MDKP21741 143 aaPredicted RBP4.92□□□□□ -1.62
CDKL5-205ENST00000623535 NCOA6Q14686 2063 aaPredicted RBP4.92□□□□□ -1.62
CDKL5-205ENST00000623535 PLXNA3P51805 1871 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 IGHV4OR15-8A0A075B7B6 117 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 A0A087WW49 117 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 MPZP25189 248 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 VWCEQ96DN2 955 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 QRFPP83859 136 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 CD300CQ08708 224 aa4.92□□□□□ -1.62
CDKL5-205ENST00000623535 LOC107984640A0A0U1RRK4 108 aa4.91□□□□□ -1.62
CDKL5-205ENST00000623535 IGFL4Q6B9Z1 124 aa4.91□□□□□ -1.62
CDKL5-205ENST00000623535 MYO9AB2RTY4 2548 aa4.91□□□□□ -1.62
CDKL5-205ENST00000623535 ANAPC1Q9H1A4 1944 aa4.91□□□□□ -1.62
CDKL5-205ENST00000623535 FGF6P10767 208 aa4.91□□□□□ -1.62
CDKL5-205ENST00000623535 LINC01590Q5TEZ4 76 aa4.91□□□□□ -1.62
CDKL5-205ENST00000623535 TRBV10-1A0A0K0K1A3 114 aa4.91□□□□□ -1.62
CDKL5-205ENST00000623535 H3BRN7 92 aa4.91□□□□□ -1.62
CDKL5-205ENST00000623535 SND1-IT1Q9HBX3 110 aa4.91□□□□□ -1.62
CDKL5-205ENST00000623535 C2orf16Q68DN1 1984 aa4.91□□□□□ -1.62
CDKL5-205ENST00000623535 C17orf82Q86X59 251 aaPredicted RBP4.91□□□□□ -1.62
CDKL5-205ENST00000623535 IGKV1D-8A0A087WSZ0 117 aa4.9□□□□□ -1.62
CDKL5-205ENST00000623535 GAGE12HA6NDE8 117 aa4.9□□□□□ -1.62
CDKL5-205ENST00000623535 XAF1Q6GPH4 301 aa4.9□□□□□ -1.62
CDKL5-205ENST00000623535 HELZP42694 1942 aaKnown RBP4.9□□□□□ -1.62
CDKL5-205ENST00000623535 RLFQ13129 1914 aa4.9□□□□□ -1.62
CDKL5-205ENST00000623535 IGLV3-9A0A075B6K5 115 aa4.9□□□□□ -1.62
CDKL5-205ENST00000623535 TINCRA0A1B0GVN0 87 aa4.9□□□□□ -1.62
CDKL5-205ENST00000623535 NDUFC2O95298 119 aa4.9□□□□□ -1.62
CDKL5-205ENST00000623535 ACYP1P07311 99 aa4.9□□□□□ -1.62
CDKL5-205ENST00000623535 PTPRDP23468 1912 aa4.9□□□□□ -1.62
CDKL5-205ENST00000623535 TMEM256-PLSCR3K7ERE1 68 aa4.9□□□□□ -1.62
CDKL5-205ENST00000623535 TRBV19A0A075B6N1 114 aa4.9□□□□□ -1.63
CDKL5-205ENST00000623535 IGKV1-9A0A0C4DH69 117 aa4.9□□□□□ -1.63
CDKL5-205ENST00000623535 SPINK6Q6UWN8 80 aa4.9□□□□□ -1.63
CDKL5-205ENST00000623535 C3orf22Q8N5N4 141 aa4.9□□□□□ -1.63
CDKL5-205ENST00000623535 SERP2Q8N6R1 65 aa4.9□□□□□ -1.63
CDKL5-205ENST00000623535 SVIPQ8NHG7 77 aa4.9□□□□□ -1.63
CDKL5-205ENST00000623535 LCTP09848 1927 aa4.9□□□□□ -1.63
CDKL5-205ENST00000623535 H7C423 109 aa4.9□□□□□ -1.63
CDKL5-205ENST00000623535 NRGNQ92686 78 aa4.9□□□□□ -1.63
CDKL5-205ENST00000623535 RSPO3Q9BXY4 272 aaPredicted RBP4.9□□□□□ -1.63
CDKL5-205ENST00000623535 TFF1P04155 84 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 NUP210Q8TEM1 1887 aaPredicted RBP4.89□□□□□ -1.63
CDKL5-205ENST00000623535 IGHV4-31P0DP07 118 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 WFDC11Q8NEX6 87 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 TECTAO75443 2155 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 CEP192Q8TEP8 1941 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 ARHGAP21Q5T5U3 1957 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 FNDC4Q9H6D8 234 aaPredicted RBP4.89□□□□□ -1.63
CDKL5-205ENST00000623535 FAM222AQ5U5X8 452 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 MORN5Q5VZ52 161 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 C1orf158Q8N1D5 194 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 Q8NA96 180 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 NDUFA4L2Q9NRX3 87 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 REG3AQ06141 175 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 FAM215AQ9Y5M1 114 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 USP9XQ93008 2570 aaPredicted RBP4.89□□□□□ -1.63
CDKL5-205ENST00000623535 ADAMTSL1Q8N6G6 1762 aa4.89□□□□□ -1.63
CDKL5-205ENST00000623535 ADORA2A-AS1P86434 159 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 NUP35Q8NFH5 326 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.88□□□□□ -1.63
CDKL5-205ENST00000623535 IGKV2-29A2NJV5 120 aaPredicted RBP4.88□□□□□ -1.63
CDKL5-205ENST00000623535 GUSBP1Q15486 140 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 C5orf56Q8N8D9 126 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 J3QQQ9 107 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 TNFRSF13BO14836 293 aaPredicted RBP4.88□□□□□ -1.63
CDKL5-205ENST00000623535 KIR3DS1Q14943 382 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 POU2AF1Q16633 256 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 ZNF462Q96JM2 2506 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 IGLV1-44P01699 117 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 PSMB8P28062 276 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 Q6YL49 198 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 FAM19A5Q7Z5A7 132 aaPredicted RBP4.88□□□□□ -1.63
CDKL5-205ENST00000623535 OCC1Q8TAD7 63 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 COX6B2Q6YFQ2 88 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 FAM110AQ9BQ89 295 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 CTSZQ9UBR2 303 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 IGKV1D-43A0A0B4J1Z2 117 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 CXCL3P19876 107 aa4.88□□□□□ -1.63
CDKL5-205ENST00000623535 MRPL52Q86TS9 123 aaKnown RBP4.88□□□□□ -1.63
CDKL5-205ENST00000623535 C4orf51C9J302 202 aa4.87□□□□□ -1.63
CDKL5-205ENST00000623535 SYCNQ0VAF6 134 aa4.87□□□□□ -1.63
CDKL5-205ENST00000623535 PRO1854Q9UHT4 67 aa4.87□□□□□ -1.63
CDKL5-205ENST00000623535 A0A1B0GV90 55 aa4.87□□□□□ -1.63
CDKL5-205ENST00000623535 FBXL19-AS1Q494R0 122 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms