RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098	IGIP	A6NJ69	53 aa		13.24	□□□□□ -0.29
CDK16-223	ENST00000622098	NDUFS8	O00217	210 aa		13.24	□□□□□ -0.29
CDK16-223	ENST00000622098	COX6B1	P14854	86 aa		13.24	□□□□□ -0.29
CDK16-223	ENST00000622098	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
CDK16-223	ENST00000622098	PRORY	Q9H606	182 aa		13.24	□□□□□ -0.29
CDK16-223	ENST00000622098	SORL1	Q92673	2214 aa		13.24	□□□□□ -0.29
CDK16-223	ENST00000622098	TRAV12-2	A0A075B6T6	113 aa		13.23	□□□□□ -0.29
CDK16-223	ENST00000622098	SDHAF1	A6NFY7	115 aa		13.23	□□□□□ -0.29
CDK16-223	ENST00000622098		K7EMT4	169 aa		13.23	□□□□□ -0.29
CDK16-223	ENST00000622098	C10orf99	Q6UWK7	81 aa		13.23	□□□□□ -0.29
CDK16-223	ENST00000622098	DOPEY2	Q9Y3R5	2298 aa		13.23	□□□□□ -0.29
CDK16-223	ENST00000622098	VCY	O14598	125 aa		13.23	□□□□□ -0.29
CDK16-223	ENST00000622098	MORN3	Q6PF18	240 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK16-223	ENST00000622098	SPANXB1	Q9NS25	103 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK16-223	ENST00000622098	PGPEP1	Q9NXJ5	209 aa		13.23	□□□□□ -0.29
CDK16-223	ENST00000622098	ETDB	Q3ZM63	59 aa		13.23	□□□□□ -0.29
CDK16-223	ENST00000622098	SH2D6	Q7Z4S9	175 aa		13.23	□□□□□ -0.29
CDK16-223	ENST00000622098	PKD1L2	Q7Z442	2459 aa		13.22	□□□□□ -0.29
CDK16-223	ENST00000622098	CFAP46	Q8IYW2	2715 aa		13.22	□□□□□ -0.29
CDK16-223	ENST00000622098	FLNC	Q14315	2725 aa		13.22	□□□□□ -0.29
CDK16-223	ENST00000622098	RPL32	P62910	135 aa	Known RBP	13.22	□□□□□ -0.29
CDK16-223	ENST00000622098	PMVK	Q15126	192 aa		13.22	□□□□□ -0.29
CDK16-223	ENST00000622098	MRPL16	Q9NX20	251 aa	Known RBP	13.22	□□□□□ -0.29
CDK16-223	ENST00000622098	MDFIC	Q9P1T7	246 aa		13.22	□□□□□ -0.29
CDK16-223	ENST00000622098	GAGE13	Q4V321	117 aa		13.21	□□□□□ -0.29
CDK16-223	ENST00000622098	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.21	□□□□□ -0.29
CDK16-223	ENST00000622098	CREBBP	Q92793	2442 aa		13.21	□□□□□ -0.29
CDK16-223	ENST00000622098	PSMB8	P28062	276 aa		13.2	□□□□□ -0.3
CDK16-223	ENST00000622098	HERVK_113	P61574	105 aa		13.2	□□□□□ -0.3
CDK16-223	ENST00000622098	TMEM238L	A0A1B0GVL6	79 aa		13.2	□□□□□ -0.3
CDK16-223	ENST00000622098		A6NJY4	79 aa		13.2	□□□□□ -0.3
CDK16-223	ENST00000622098	PAPPA-AS1	Q5QFB9	102 aa		13.2	□□□□□ -0.3
CDK16-223	ENST00000622098	TMEM170B	Q5T4T1	132 aa		13.2	□□□□□ -0.3
CDK16-223	ENST00000622098	SAMD13	Q5VXD3	122 aa		13.2	□□□□□ -0.3
CDK16-223	ENST00000622098	IGHV3-16	A0A0C4DH30	117 aa		13.19	□□□□□ -0.3
CDK16-223	ENST00000622098	LINC01549	A6NIU2	74 aa		13.19	□□□□□ -0.3
CDK16-223	ENST00000622098	IGHV4-59	P01825	116 aa		13.19	□□□□□ -0.3
CDK16-223	ENST00000622098	ZNF56	Q15929	161 aa		13.19	□□□□□ -0.3
CDK16-223	ENST00000622098	SFTA2	Q6UW10	78 aa		13.19	□□□□□ -0.3
CDK16-223	ENST00000622098	TMEM141	Q96I45	108 aa		13.19	□□□□□ -0.3
CDK16-223	ENST00000622098	TRBV27	A0A0K0K1C4	114 aa		13.19	□□□□□ -0.3
CDK16-223	ENST00000622098		Q8N1Y9	231 aa		13.19	□□□□□ -0.3
CDK16-223	ENST00000622098	TIMM17A	Q99595	171 aa		13.19	□□□□□ -0.3
CDK16-223	ENST00000622098	LGALS9	O00182	355 aa		13.18	□□□□□ -0.3
CDK16-223	ENST00000622098	PRO0461	Q9UI25	63 aa		13.18	□□□□□ -0.3
CDK16-223	ENST00000622098	USP9Y	O00507	2555 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK16-223	ENST00000622098		B4DSR2	109 aa		13.18	□□□□□ -0.3
CDK16-223	ENST00000622098	ZNRF2	Q8NHG8	242 aa		13.18	□□□□□ -0.3
CDK16-223	ENST00000622098	C9orf85	Q96MD7	179 aa		13.18	□□□□□ -0.3
CDK16-223	ENST00000622098	USP9X	Q93008	2570 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK16-223	ENST00000622098		A0A0J9YX75	114 aa		13.17	□□□□□ -0.3
CDK16-223	ENST00000622098	TMEM238	C9JI98	176 aa		13.17	□□□□□ -0.3
CDK16-223	ENST00000622098	SNRPD3	P62318	126 aa	Known RBP	13.17	□□□□□ -0.3
CDK16-223	ENST00000622098	SPINK13	Q1W4C9	94 aa		13.17	□□□□□ -0.3
CDK16-223	ENST00000622098		A0A0J9YY99	117 aa		13.17	□□□□□ -0.3
CDK16-223	ENST00000622098	APOM	O95445	188 aa		13.17	□□□□□ -0.3
CDK16-223	ENST00000622098	UBE2D1	P51668	147 aa		13.17	□□□□□ -0.3
CDK16-223	ENST00000622098	TSPEAR-AS2	P59090	65 aa		13.17	□□□□□ -0.3
CDK16-223	ENST00000622098	UTP20	O75691	2785 aa	Known RBP	13.17	□□□□□ -0.3
CDK16-223	ENST00000622098	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.17	□□□□□ -0.3
CDK16-223	ENST00000622098	DOPEY1	Q5JWR5	2465 aa		13.16	□□□□□ -0.3
CDK16-223	ENST00000622098	DEFB112	Q30KQ8	113 aa		13.16	□□□□□ -0.3
CDK16-223	ENST00000622098	OPRPN	Q99935	248 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK16-223	ENST00000622098	TRBV6-5	A0A0K0K1A5	114 aa		13.16	□□□□□ -0.3
CDK16-223	ENST00000622098		J3QR89	54 aa		13.16	□□□□□ -0.3
CDK16-223	ENST00000622098		M0QY20	66 aa		13.16	□□□□□ -0.3
CDK16-223	ENST00000622098	ZNF876P	Q49A33	203 aa		13.16	□□□□□ -0.3
CDK16-223	ENST00000622098	SYT8	Q8NBV8	401 aa		13.16	□□□□□ -0.3
CDK16-223	ENST00000622098	SPAG8	Q99932	426 aa	Predicted RBP	13.16	□□□□□ -0.3
CDK16-223	ENST00000622098	ZAN	Q9Y493	2812 aa		13.15	□□□□□ -0.3
CDK16-223	ENST00000622098	LOC107984156	A0A0G2JMH3	177 aa		13.15	□□□□□ -0.3
CDK16-223	ENST00000622098	ARL17A	Q8IVW1	177 aa		13.15	□□□□□ -0.3
CDK16-223	ENST00000622098	NRGN	Q92686	78 aa		13.15	□□□□□ -0.3
CDK16-223	ENST00000622098	GTSF1L	Q9H1H1	148 aa		13.15	□□□□□ -0.3
CDK16-223	ENST00000622098	SYNJ2BP	P57105	145 aa		13.15	□□□□□ -0.3
CDK16-223	ENST00000622098	TSPAN13	O95857	204 aa		13.14	□□□□□ -0.31
CDK16-223	ENST00000622098	DUX5	Q96PT3	197 aa		13.14	□□□□□ -0.31
CDK16-223	ENST00000622098	ODF3	Q96PU9	254 aa		13.14	□□□□□ -0.31
CDK16-223	ENST00000622098	IGHV1OR15-1	A0A075B7D0	117 aa		13.14	□□□□□ -0.31
CDK16-223	ENST00000622098		K7EQG2	157 aa		13.14	□□□□□ -0.31
CDK16-223	ENST00000622098	INSL3	P51460	131 aa		13.14	□□□□□ -0.31
CDK16-223	ENST00000622098	GAGE12H	A6NDE8	117 aa		13.13	□□□□□ -0.31
CDK16-223	ENST00000622098	DLX4	Q92988	240 aa	Predicted RBP	13.13	□□□□□ -0.31
CDK16-223	ENST00000622098	ZNF580	Q9UK33	172 aa		13.13	□□□□□ -0.31
CDK16-223	ENST00000622098	AZU1	P20160	251 aa		13.12	□□□□□ -0.31
CDK16-223	ENST00000622098	PSMB2	P49721	201 aa		13.12	□□□□□ -0.31
CDK16-223	ENST00000622098		J3QQQ9	107 aa		13.11	□□□□□ -0.31
CDK16-223	ENST00000622098	TRPT1	Q86TN4	253 aa	Known RBP	13.11	□□□□□ -0.31
CDK16-223	ENST00000622098	NDUFA11	Q86Y39	141 aa		13.11	□□□□□ -0.31
CDK16-223	ENST00000622098	SIGMAR1	Q99720	223 aa		13.11	□□□□□ -0.31
CDK16-223	ENST00000622098	IGHV3-30	P01768	117 aa		13.11	□□□□□ -0.31
CDK16-223	ENST00000622098		P0DMU3	169 aa		13.11	□□□□□ -0.31
CDK16-223	ENST00000622098	FAM231A	P0DMU4	169 aa		13.11	□□□□□ -0.31
CDK16-223	ENST00000622098	FAM231C	P0DMU5	169 aa		13.11	□□□□□ -0.31
CDK16-223	ENST00000622098	IGHV3-30-5	P0DP03	117 aa		13.11	□□□□□ -0.31
CDK16-223	ENST00000622098	SMAGP	Q0VAQ4	97 aa		13.11	□□□□□ -0.31
CDK16-223	ENST00000622098	NSUN5P1	Q3KNT7	163 aa		13.11	□□□□□ -0.31
CDK16-223	ENST00000622098	SLC25A29	Q8N8R3	303 aa		13.11	□□□□□ -0.31
CDK16-223	ENST00000622098	MYO18B	Q8IUG5	2567 aa		13.1	□□□□□ -0.31
CDK16-223	ENST00000622098	POLQ	O75417	2590 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms