RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 VMA21Q3ZAQ7 101 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 GGTA1PQ4G0N0 100 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 HSP90AA4PQ58FG1 418 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 C6orf226Q5I0X4 101 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 THOC7Q6I9Y2 204 aaKnown RBP-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 LAMTOR1Q6IAA8 161 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 SHQ1Q6PI26 577 aaKnown RBP-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 GBP6Q6ZN66 633 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 COMMD6Q7Z4G1 85 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 C6orf201Q7Z4U5 140 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 CMC1Q7Z7K0 106 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 METTL23Q86XA0 190 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 STX19Q8N4C7 294 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 CLHC1Q8NHS4 586 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 MGARPQ8TDB4 240 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 DNAJC9Q8WXX5 260 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 FAM213AQ9BRX8 229 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 PRO1933Q9H354 126 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 ENY2Q9NPA8 101 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 FANCLQ9NW38 375 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 HPF1Q9NWY4 346 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 FBXL12Q9NXK8 326 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 AKAP7Q9P0M2 348 aaPredicted RBP-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 UXTQ9UBK9 157 aaPredicted RBP-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 COPS7AQ9UBW8 275 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 ANXA10Q9UJ72 324 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 HDGFL3Q9Y3E1 203 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 PTRH2Q9Y3E5 179 aaKnown RBP-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 MPC1Q9Y5U8 109 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 UHRF1BP1Q6BDS2 1440 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 VPS8Q8N3P4 1428 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 GLI2P10070 1586 aa-1.85□□□□□ -2.71
SOX2-OT-236ENST00000616401 NEXMIFQ5QGS0 1516 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 SCN7AQ01118 1682 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 KIF14Q15058 1648 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 IGHV1-69-2A0A0G2JMI3 117 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 C3orf85A0A1B0GTC6 90 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 TAX1BP3O14907 124 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 PPP1R2P9O14990 202 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 RNF13O43567 381 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 PTBP3O95758 552 aaKnown RBP-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 SERPINA6P08185 405 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 SAT1P21673 171 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 HMOX2P30519 316 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 RPS27P42677 84 aaKnown RBP-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 RPS5P46782 204 aaKnown RBP-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 MFAP1P55081 439 aaKnown RBP-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 MRPS36P82909 103 aaKnown RBP-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 CDC37Q16543 378 aaPredicted RBP-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 C2orf76Q3KRA6 126 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 CENPWQ5EE01 88 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 DCUN1D2Q6PH85 259 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 TMEM107Q6UX40 140 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 ASCL4Q6XD76 172 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 RPS27LQ71UM5 84 aaKnown RBP-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 NATD1Q8N6N6 113 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 CCDC89Q8N998 374 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 OR51Q1Q8NH59 317 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 TRMT10AQ8TBZ6 339 aaKnown RBP-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 RAB1CQ92928 201 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 DCUN1D1Q96GG9 259 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 PANX1Q96RD7 426 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 NAA11Q9BSU3 229 aaPredicted RBP-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 TMEM43Q9BTV4 400 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 COA1Q9GZY4 146 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 NCOR1P1Q9H4R4 102 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 PARVBQ9HBI1 364 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 LRTM1Q9HBL6 345 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 C6orf50Q9HD87 102 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 ISY1Q9ULR0 285 aaKnown RBP-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 LINC01558Q9Y6Z2 57 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 ZFYVE9O95405 1425 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 ROCK1Q13464 1354 aa-1.86□□□□□ -2.71
SOX2-OT-236ENST00000616401 NEO1Q92859 1461 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 PPLO60437 1756 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 TRBV7-7A0A0K0K1E9 115 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 FAM240AA0A1B0GVK7 77 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 GOLGA8SH3BPF8 625 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 ZNF701M0R085 212 aaPredicted RBP-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 M0R1B8 84 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 NDUFB3O43676 98 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 HPGDSO60760 199 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 TMEM50AO95807 157 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 TRACP01848 142 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 FAM58BPP0C7Q3 252 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 STOMP27105 288 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 TCTAP57738 103 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 NCALDP61601 193 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 RANP62826 216 aaKnown RBP-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 CAV1Q03135 178 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 BAXQ07812 192 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 SYCP1Q15431 976 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 LTC4SQ16873 150 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 CFAP58Q5T655 872 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 C6orf183Q5T699 404 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 PIP5KL1Q5T9C9 394 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 SDHAF4Q5VUM1 108 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 C11orf88Q6PI97 169 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 CCDC91Q7Z6B0 441 aa-1.87□□□□□ -2.71
SOX2-OT-236ENST00000616401 SYCP3Q8IZU3 236 aa-1.87□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms