RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 LOC101927531A0A1B0GV80 90 aa1.98□□□□□ -2.09
RFC3-203ENST00000616236 IGKV2-29A2NJV5 120 aaPredicted RBP1.98□□□□□ -2.09
RFC3-203ENST00000616236 A6NIN4 97 aa1.98□□□□□ -2.09
RFC3-203ENST00000616236 HIGD1CA8MV81 97 aa1.98□□□□□ -2.09
RFC3-203ENST00000616236 SNRNP200O75643 2136 aaKnown RBP1.98□□□□□ -2.09
RFC3-203ENST00000616236 SMIM6P0DI80 62 aa1.98□□□□□ -2.09
RFC3-203ENST00000616236 C9orf153Q5TBE3 101 aa1.98□□□□□ -2.09
RFC3-203ENST00000616236 NDUFA11Q86Y39 141 aa1.98□□□□□ -2.09
RFC3-203ENST00000616236 TSKUQ8WUA8 353 aa1.98□□□□□ -2.09
RFC3-203ENST00000616236 PPP3R2Q96LZ3 170 aa1.98□□□□□ -2.09
RFC3-203ENST00000616236 IER3IP1Q9Y5U9 82 aa1.98□□□□□ -2.09
RFC3-203ENST00000616236 CACNA1BQ00975 2339 aa1.98□□□□□ -2.09
RFC3-203ENST00000616236 PEAK1Q9H792 1746 aa1.97□□□□□ -2.09
RFC3-203ENST00000616236 ZNF142P52746 1687 aaPredicted RBP1.97□□□□□ -2.09
RFC3-203ENST00000616236 CBLN1P23435 193 aa1.97□□□□□ -2.09
RFC3-203ENST00000616236 C12orf73Q69YU5 71 aa1.97□□□□□ -2.09
RFC3-203ENST00000616236 DEFB119Q8N690 84 aa1.97□□□□□ -2.09
RFC3-203ENST00000616236 Q8N8P6 123 aa1.97□□□□□ -2.09
RFC3-203ENST00000616236 C10orf82Q8WW14 230 aa1.97□□□□□ -2.09
RFC3-203ENST00000616236 DLG5Q8TDM6 1919 aa1.97□□□□□ -2.09
RFC3-203ENST00000616236 RREB1Q92766 1687 aa1.96□□□□□ -2.1
RFC3-203ENST00000616236 NCOA6Q14686 2063 aaPredicted RBP1.96□□□□□ -2.1
RFC3-203ENST00000616236 TRAV12-3A0A0B4J271 114 aa1.96□□□□□ -2.1
RFC3-203ENST00000616236 OOSP1A8MZH6 123 aa1.96□□□□□ -2.1
RFC3-203ENST00000616236 NPC2P61916 151 aa1.96□□□□□ -2.1
RFC3-203ENST00000616236 RBM3P98179 157 aaKnown RBP1.96□□□□□ -2.1
RFC3-203ENST00000616236 INSL4Q14641 139 aa1.96□□□□□ -2.1
RFC3-203ENST00000616236 GTF2H5Q6ZYL4 71 aa1.96□□□□□ -2.1
RFC3-203ENST00000616236 SPTSSBQ8NFR3 76 aa1.96□□□□□ -2.1
RFC3-203ENST00000616236 RPRMQ9NS64 109 aa1.96□□□□□ -2.1
RFC3-203ENST00000616236 COA4Q9NYJ1 87 aa1.96□□□□□ -2.1
RFC3-203ENST00000616236 AFDNP55196 1824 aaKnown RBP1.96□□□□□ -2.1
RFC3-203ENST00000616236 MRC2Q9UBG0 1479 aa1.95□□□□□ -2.1
RFC3-203ENST00000616236 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
RFC3-203ENST00000616236 DSCR8Q96T75 97 aa1.95□□□□□ -2.1
RFC3-203ENST00000616236 ESPL1Q14674 2120 aa1.94□□□□□ -2.1
RFC3-203ENST00000616236 NRKQ7Z2Y5 1582 aa1.94□□□□□ -2.1
RFC3-203ENST00000616236 KIAA0100Q14667 2235 aaKnown RBP1.94□□□□□ -2.1
RFC3-203ENST00000616236 SPAG17Q6Q759 2223 aa1.94□□□□□ -2.1
RFC3-203ENST00000616236 TECTAO75443 2155 aa1.94□□□□□ -2.1
RFC3-203ENST00000616236 NBDYA0A0U1RRE5 68 aa1.94□□□□□ -2.1
RFC3-203ENST00000616236 FXYD3Q14802 87 aa1.94□□□□□ -2.1
RFC3-203ENST00000616236 DEFB132Q7Z7B7 95 aa1.94□□□□□ -2.1
RFC3-203ENST00000616236 SPTBP11277 2137 aa1.94□□□□□ -2.1
RFC3-203ENST00000616236 ROBO1Q9Y6N7 1651 aa1.93□□□□□ -2.1
RFC3-203ENST00000616236 IFNA17P01571 189 aa1.93□□□□□ -2.1
RFC3-203ENST00000616236 XAF1Q6GPH4 301 aa1.93□□□□□ -2.1
RFC3-203ENST00000616236 CYP2G1PQ6ZSU1 146 aa1.93□□□□□ -2.1
RFC3-203ENST00000616236 SVBPQ8N300 66 aa1.93□□□□□ -2.1
RFC3-203ENST00000616236 AMELYQ99218 206 aa1.93□□□□□ -2.1
RFC3-203ENST00000616236 SPANXDQ9BXN6 97 aa1.93□□□□□ -2.1
RFC3-203ENST00000616236 SMARCA2P51531 1590 aa1.93□□□□□ -2.1
RFC3-203ENST00000616236 TRBV10-3A0A0K0K1G6 114 aa1.92□□□□□ -2.1
RFC3-203ENST00000616236 HSD52Q0P140 79 aa1.92□□□□□ -2.1
RFC3-203ENST00000616236 ABCA4P78363 2273 aa1.92□□□□□ -2.1
RFC3-203ENST00000616236 PRRC2BQ5JSZ5 2229 aaKnown RBP1.91□□□□□ -2.1
RFC3-203ENST00000616236 IFT140Q96RY7 1462 aa1.91□□□□□ -2.1
RFC3-203ENST00000616236 CCNB3Q8WWL7 1395 aa1.91□□□□□ -2.1
RFC3-203ENST00000616236 PIGBOS1A0A0B4J2F0 54 aa1.91□□□□□ -2.1
RFC3-203ENST00000616236 TEX49A0A1B0GTD5 131 aa1.91□□□□□ -2.1
RFC3-203ENST00000616236 NCR3O14931 201 aa1.91□□□□□ -2.1
RFC3-203ENST00000616236 LYNX1P0DP58 116 aa1.91□□□□□ -2.1
RFC3-203ENST00000616236 C5orf56Q8N8D9 126 aa1.91□□□□□ -2.1
RFC3-203ENST00000616236 MYH8P13535 1937 aa1.91□□□□□ -2.1
RFC3-203ENST00000616236 NWD2Q9ULI1 1742 aa1.91□□□□□ -2.1
RFC3-203ENST00000616236 MAPKBP1O60336 1514 aa1.91□□□□□ -2.1
RFC3-203ENST00000616236 ZFYVE16Q7Z3T8 1539 aa1.91□□□□□ -2.1
RFC3-203ENST00000616236 FBN1P35555 2871 aaKnown RBP1.9□□□□□ -2.1
RFC3-203ENST00000616236 ASCC3Q8N3C0 2202 aaKnown RBP1.9□□□□□ -2.1
RFC3-203ENST00000616236 PARP14Q460N5 1801 aa1.9□□□□□ -2.11
RFC3-203ENST00000616236 PATJQ8NI35 1801 aa1.9□□□□□ -2.11
RFC3-203ENST00000616236 TMEM218A2RU14 115 aa1.9□□□□□ -2.11
RFC3-203ENST00000616236 IFITM1P13164 125 aa1.9□□□□□ -2.11
RFC3-203ENST00000616236 Q6ZQY7 126 aa1.9□□□□□ -2.11
RFC3-203ENST00000616236 KRTAP5-5Q701N2 237 aaPredicted RBP1.9□□□□□ -2.11
RFC3-203ENST00000616236 Q86TA4 180 aa1.9□□□□□ -2.11
RFC3-203ENST00000616236 C8orf59Q8N0T1 100 aaPredicted RBP1.9□□□□□ -2.11
RFC3-203ENST00000616236 LINC00208Q96KT6 92 aa1.9□□□□□ -2.11
RFC3-203ENST00000616236 NRXN2Q9P2S2 1712 aa1.9□□□□□ -2.11
RFC3-203ENST00000616236 PLXNA1Q9UIW2 1896 aa1.9□□□□□ -2.11
RFC3-203ENST00000616236 ARAP2Q8WZ64 1704 aa1.89□□□□□ -2.11
RFC3-203ENST00000616236 SPINK8P0C7L1 97 aa1.89□□□□□ -2.11
RFC3-203ENST00000616236 EFNA4P52798 201 aa1.89□□□□□ -2.11
RFC3-203ENST00000616236 CCL19Q99731 98 aa1.89□□□□□ -2.11
RFC3-203ENST00000616236 BLMP54132 1417 aaPredicted RBP1.89□□□□□ -2.11
RFC3-203ENST00000616236 CNTLNQ9NXG0 1405 aa1.89□□□□□ -2.11
RFC3-203ENST00000616236 PHIPQ8WWQ0 1821 aa1.89□□□□□ -2.11
RFC3-203ENST00000616236 TRAV13-2A0A0B4J235 113 aa1.88□□□□□ -2.11
RFC3-203ENST00000616236 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
RFC3-203ENST00000616236 CPSF1Q10570 1443 aaKnown RBP1.88□□□□□ -2.11
RFC3-203ENST00000616236 DOCK1Q14185 1865 aa1.88□□□□□ -2.11
RFC3-203ENST00000616236 FLG2Q5D862 2391 aaPredicted RBP1.87□□□□□ -2.11
RFC3-203ENST00000616236 ARFGEF1Q9Y6D6 1849 aa1.87□□□□□ -2.11
RFC3-203ENST00000616236 TRAV30A0A087WSZ9 112 aa1.87□□□□□ -2.11
RFC3-203ENST00000616236 FAM24AA6NFZ4 105 aa1.87□□□□□ -2.11
RFC3-203ENST00000616236 HCG22E2RYF7 251 aa1.87□□□□□ -2.11
RFC3-203ENST00000616236 FXYD1O00168 92 aa1.87□□□□□ -2.11
RFC3-203ENST00000616236 PRB1P04280 392 aa1.87□□□□□ -2.11
RFC3-203ENST00000616236 S100A8P05109 93 aa1.87□□□□□ -2.11
RFC3-203ENST00000616236 UBE2D1P51668 147 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms