RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 UBE2V1Q13404 147 aa14.66□□□□□ -0.06
SMARCD2-212ENST00000613943 NAA38Q9BRA0 125 aaKnown RBP14.66□□□□□ -0.06
SMARCD2-212ENST00000613943 SAMD13Q5VXD3 122 aa14.65□□□□□ -0.06
SMARCD2-212ENST00000613943 C2orf66Q6UXQ4 117 aa14.65□□□□□ -0.06
SMARCD2-212ENST00000613943 C11orf44Q8N8P7 122 aa14.65□□□□□ -0.06
SMARCD2-212ENST00000613943 ACANP16112 2415 aa14.65□□□□□ -0.06
SMARCD2-212ENST00000613943 A0A087WX48 190 aa14.65□□□□□ -0.06
SMARCD2-212ENST00000613943 ORMDL2Q53FV1 153 aa14.65□□□□□ -0.06
SMARCD2-212ENST00000613943 TOMM6Q96B49 74 aa14.65□□□□□ -0.06
SMARCD2-212ENST00000613943 RBMY1A1P0DJD3 496 aaKnown RBP14.64□□□□□ -0.07
SMARCD2-212ENST00000613943 RBMY1CP0DJD4 496 aa14.64□□□□□ -0.07
SMARCD2-212ENST00000613943 RBMY1FQ15415 496 aaKnown RBP14.64□□□□□ -0.07
SMARCD2-212ENST00000613943 TRAV8-6A0A0B4J262 113 aa14.64□□□□□ -0.07
SMARCD2-212ENST00000613943 DEFB131AP59861 70 aa14.63□□□□□ -0.07
SMARCD2-212ENST00000613943 AMMECR1LQ6DCA0 310 aa14.63□□□□□ -0.07
SMARCD2-212ENST00000613943 RNF152Q8N8N0 203 aa14.63□□□□□ -0.07
SMARCD2-212ENST00000613943 OR9G4Q8NGQ1 327 aa14.63□□□□□ -0.07
SMARCD2-212ENST00000613943 K7EMI3 77 aa14.63□□□□□ -0.07
SMARCD2-212ENST00000613943 DUSP14O95147 198 aaKnown RBP14.62□□□□□ -0.07
SMARCD2-212ENST00000613943 AMTNQ6UX39 209 aa14.62□□□□□ -0.07
SMARCD2-212ENST00000613943 LRRC75A-AS1Q8N1F1 130 aa14.62□□□□□ -0.07
SMARCD2-212ENST00000613943 MAPKAPK5-AS1Q8N8E1 139 aa14.62□□□□□ -0.07
SMARCD2-212ENST00000613943 WNK1Q9H4A3 2382 aa14.62□□□□□ -0.07
SMARCD2-212ENST00000613943 IGHV1OR15-1A0A075B7D0 117 aa14.61□□□□□ -0.07
SMARCD2-212ENST00000613943 C9orf85Q96MD7 179 aa14.61□□□□□ -0.07
SMARCD2-212ENST00000613943 NIPBLQ6KC79 2804 aaeCLIP14.61□□□□□ -0.07
SMARCD2-212ENST00000613943 HSD52Q0P140 79 aa14.61□□□□□ -0.07
SMARCD2-212ENST00000613943 TMEM61Q8N0U2 210 aa14.61□□□□□ -0.07
SMARCD2-212ENST00000613943 BAALCQ8WXS3 180 aa14.61□□□□□ -0.07
SMARCD2-212ENST00000613943 RAB37Q96AX2 223 aa14.61□□□□□ -0.07
SMARCD2-212ENST00000613943 RPL39P62891 51 aaKnown RBP14.6□□□□□ -0.07
SMARCD2-212ENST00000613943 ZNF56Q15929 161 aa14.6□□□□□ -0.07
SMARCD2-212ENST00000613943 POM121L12Q8N7R1 296 aa14.6□□□□□ -0.07
SMARCD2-212ENST00000613943 DLX4Q92988 240 aaPredicted RBP14.6□□□□□ -0.07
SMARCD2-212ENST00000613943 EMP1P54849 157 aa14.6□□□□□ -0.07
SMARCD2-212ENST00000613943 FOXI2Q6ZQN5 318 aa14.6□□□□□ -0.07
SMARCD2-212ENST00000613943 NEXN-AS1Q8NBZ9 246 aa14.6□□□□□ -0.07
SMARCD2-212ENST00000613943 KLHL30-AS1Q8NEE0 82 aa14.6□□□□□ -0.07
SMARCD2-212ENST00000613943 ODF3Q96PU9 254 aa14.6□□□□□ -0.07
SMARCD2-212ENST00000613943 ZNF256Q9Y2P7 627 aaPredicted RBP14.6□□□□□ -0.07
SMARCD2-212ENST00000613943 CHTOPQ9Y3Y2 248 aaKnown RBP14.6□□□□□ -0.07
SMARCD2-212ENST00000613943 MTORP42345 2549 aa14.6□□□□□ -0.07
SMARCD2-212ENST00000613943 TRBV25-1A0A075B6N4 114 aa14.59□□□□□ -0.07
SMARCD2-212ENST00000613943 F8VRH5 84 aa14.59□□□□□ -0.07
SMARCD2-212ENST00000613943 LINC01619G3V211 115 aa14.59□□□□□ -0.07
SMARCD2-212ENST00000613943 SEC11AP67812 179 aa14.59□□□□□ -0.07
SMARCD2-212ENST00000613943 Q8N2B8 174 aa14.59□□□□□ -0.07
SMARCD2-212ENST00000613943 TP53TG1Q9Y2A0 90 aa14.59□□□□□ -0.07
SMARCD2-212ENST00000613943 SDHAF1A6NFY7 115 aa14.58□□□□□ -0.08
SMARCD2-212ENST00000613943 H7C1H1 209 aa14.58□□□□□ -0.08
SMARCD2-212ENST00000613943 GCSHP23434 173 aa14.58□□□□□ -0.08
SMARCD2-212ENST00000613943 OR4C5Q8NGB2 326 aa14.58□□□□□ -0.08
SMARCD2-212ENST00000613943 CHAC1Q9BUX1 264 aa14.58□□□□□ -0.08
SMARCD2-212ENST00000613943 A0A1W2PRX2 142 aa14.58□□□□□ -0.08
SMARCD2-212ENST00000613943 RBMY1BA6NDE4 496 aaKnown RBP14.58□□□□□ -0.08
SMARCD2-212ENST00000613943 RBMY1EA6NEQ0 496 aaKnown RBP14.58□□□□□ -0.08
SMARCD2-212ENST00000613943 SIVA1O15304 175 aa14.58□□□□□ -0.08
SMARCD2-212ENST00000613943 CRYGDP07320 174 aa14.58□□□□□ -0.08
SMARCD2-212ENST00000613943 RBMY1DP0C7P1 496 aaKnown RBP14.58□□□□□ -0.08
SMARCD2-212ENST00000613943 ZNF876PQ49A33 203 aa14.58□□□□□ -0.08
SMARCD2-212ENST00000613943 MORN3Q6PF18 240 aaPredicted RBP14.58□□□□□ -0.08
SMARCD2-212ENST00000613943 IGHV3-73A0A0B4J1V6 119 aa14.57□□□□□ -0.08
SMARCD2-212ENST00000613943 PRSS29PA6NIE9 313 aa14.57□□□□□ -0.08
SMARCD2-212ENST00000613943 POLR2KP53803 58 aaKnown RBP14.57□□□□□ -0.08
SMARCD2-212ENST00000613943 FXYD2P54710 66 aa14.57□□□□□ -0.08
SMARCD2-212ENST00000613943 ITPR2Q14571 2701 aa14.57□□□□□ -0.08
SMARCD2-212ENST00000613943 TSHBP01222 138 aa14.57□□□□□ -0.08
SMARCD2-212ENST00000613943 PLNP26678 52 aa14.57□□□□□ -0.08
SMARCD2-212ENST00000613943 ZFP2Q6ZN57 461 aa14.57□□□□□ -0.08
SMARCD2-212ENST00000613943 Q6ZSV7 163 aa14.57□□□□□ -0.08
SMARCD2-212ENST00000613943 JMJD8Q96S16 334 aa14.57□□□□□ -0.08
SMARCD2-212ENST00000613943 TRAV12-1A0A0B4J245 112 aa14.55□□□□□ -0.08
SMARCD2-212ENST00000613943 HLA-DRB4P13762 266 aa14.55□□□□□ -0.08
SMARCD2-212ENST00000613943 HLA-DRB4X5D2U9 266 aa14.55□□□□□ -0.08
SMARCD2-212ENST00000613943 PPP1R17O96001 155 aa14.55□□□□□ -0.08
SMARCD2-212ENST00000613943 C4orf3Q8WVX3 66 aa14.55□□□□□ -0.08
SMARCD2-212ENST00000613943 ESM1Q9NQ30 184 aa14.55□□□□□ -0.08
SMARCD2-212ENST00000613943 DNAJC9-AS1A6NH13 148 aa14.54□□□□□ -0.08
SMARCD2-212ENST00000613943 H3BUT2 72 aa14.54□□□□□ -0.08
SMARCD2-212ENST00000613943 K7ERJ3 54 aa14.54□□□□□ -0.08
SMARCD2-212ENST00000613943 M0QY20 66 aa14.54□□□□□ -0.08
SMARCD2-212ENST00000613943 SYT8Q8NBV8 401 aa14.54□□□□□ -0.08
SMARCD2-212ENST00000613943 CYSLTR1Q9Y271 337 aa14.54□□□□□ -0.08
SMARCD2-212ENST00000613943 PDZD2O15018 2839 aa14.53□□□□□ -0.08
SMARCD2-212ENST00000613943 A6NDN8 102 aa14.53□□□□□ -0.08
SMARCD2-212ENST00000613943 H3BMM0 161 aa14.53□□□□□ -0.08
SMARCD2-212ENST00000613943 PROK1P58294 105 aa14.53□□□□□ -0.08
SMARCD2-212ENST00000613943 KIR2DL4Q99706 377 aa14.53□□□□□ -0.08
SMARCD2-212ENST00000613943 P0DMU3 169 aa14.53□□□□□ -0.08
SMARCD2-212ENST00000613943 FAM231AP0DMU4 169 aa14.53□□□□□ -0.08
SMARCD2-212ENST00000613943 FAM231CP0DMU5 169 aa14.53□□□□□ -0.08
SMARCD2-212ENST00000613943 CD300EQ496F6 205 aaPredicted RBP14.53□□□□□ -0.08
SMARCD2-212ENST00000613943 DYNLRB2Q8TF09 96 aa14.53□□□□□ -0.08
SMARCD2-212ENST00000613943 VCYO14598 125 aa14.52□□□□□ -0.08
SMARCD2-212ENST00000613943 OPRPNQ99935 248 aaPredicted RBP14.52□□□□□ -0.08
SMARCD2-212ENST00000613943 HELZ2Q9BYK8 2649 aaKnown RBP14.52□□□□□ -0.09
SMARCD2-212ENST00000613943 RNASE8Q8TDE3 154 aaKnown RBP14.51□□□□□ -0.09
SMARCD2-212ENST00000613943 MAP6D1Q9H9H5 199 aa14.51□□□□□ -0.09
SMARCD2-212ENST00000613943 PEMTQ9UBM1 199 aa14.51□□□□□ -0.09
SMARCD2-212ENST00000613943 IGIPA6NJ69 53 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms