RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 CST9LQ9H4G1 147 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 SMAGPQ0VAQ4 97 aa4.83□□□□□ -1.64
SNX13-213ENST00000611725 INSP01308 110 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 COX6CP09669 75 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 PRR9Q5T870 116 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 XCL2Q9UBD3 114 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 ZZEF1O43149 2961 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 STAB1Q9NY15 2570 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 PGPEP1Q9NXJ5 209 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 TRGV2A0A075B6R0 118 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 LINC01619G3V211 115 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 RRN3P1Q2M238 152 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 TMEM61Q8N0U2 210 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 TMEM141Q96I45 108 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 CELSR3Q9NYQ7 3312 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 FXYD2P54710 66 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 TAL2Q16559 108 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 Q6ZS46 218 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 C20orf173Q96LM9 149 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 Q96MF0 132 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 JPT2Q9H910 190 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 C10orf99Q6UWK7 81 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 ZFP2Q6ZN57 461 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 STHQ8IWL8 128 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 HIGD1BQ9P298 99 aa4.82□□□□□ -1.64
SNX13-213ENST00000611725 IGHV4-4A0A075B6R2 117 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 TRAV12-1A0A0B4J245 112 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 K7EP34 96 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 CRIP2P52943 208 aaPredicted RBP4.81□□□□□ -1.64
SNX13-213ENST00000611725 Q8N1Y9 231 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 TRGV1A0A0A0MS02 117 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 A8MWV9 139 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 ZNF415Q09FC8 603 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 ETDBQ3ZM63 59 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 IGHV3-64A0A075B6Q5 118 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 IGKV2D-26A0A0A0MRZ7 120 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 K7EQG2 157 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 IGLV1-40P01703 118 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 BOD1L1Q8NFC6 3051 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 IGHV4OR15-8A0A075B7B6 117 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 A0A087WW49 117 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 ADGRG4Q8IZF6 3080 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 REV3LO60673 3130 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 K7ERJ3 54 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 GAGE13Q4V321 117 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 SUMO4Q6EEV6 95 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 Q6ZQT7 251 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 PLEKHB2Q96CS7 222 aa4.81□□□□□ -1.64
SNX13-213ENST00000611725 RPL36AP83881 106 aaKnown RBP4.8□□□□□ -1.64
SNX13-213ENST00000611725 RPL36ALQ969Q0 106 aaKnown RBP4.8□□□□□ -1.64
SNX13-213ENST00000611725 A0A1W2PPM0 123 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 TMEM238C9JI98 176 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 I3L3M4 83 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 SAP30O75446 220 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 C19orf54Q5BKX5 351 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 AMTNQ6UX39 209 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 RASL10AQ92737 203 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 ITPR3Q14573 2671 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 MYMXA0A1B0GTQ4 84 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 CIRBPQ14011 172 aaKnown RBP4.8□□□□□ -1.64
SNX13-213ENST00000611725 DEFB113Q30KQ7 82 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 TRAV2A0A0B4J234 112 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 J3QQQ9 107 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 SPAG8Q99932 426 aaPredicted RBP4.8□□□□□ -1.64
SNX13-213ENST00000611725 CIDEAO60543 219 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 TIMM17AQ99595 171 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 SPXQ9BT56 116 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 MDFICQ9P1T7 246 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 MGAM2Q2M2H8 2515 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 SPEGQ15772 3267 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 A0A0J9YXV3 536 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 SLURP1P55000 103 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 RPL39P62891 51 aaKnown RBP4.8□□□□□ -1.64
SNX13-213ENST00000611725 C2orf91Q6ZV80 131 aa4.8□□□□□ -1.64
SNX13-213ENST00000611725 FGF6P10767 208 aa4.79□□□□□ -1.64
SNX13-213ENST00000611725 MEIG1Q5JSS6 88 aa4.79□□□□□ -1.64
SNX13-213ENST00000611725 KLLNB2CW77 178 aa4.79□□□□□ -1.64
SNX13-213ENST00000611725 BRI3O95415 125 aa4.79□□□□□ -1.64
SNX13-213ENST00000611725 C11orf86A6NJI1 115 aa4.79□□□□□ -1.64
SNX13-213ENST00000611725 PF4P02776 101 aa4.79□□□□□ -1.64
SNX13-213ENST00000611725 C20orf203Q8NBC4 194 aa4.79□□□□□ -1.64
SNX13-213ENST00000611725 MAST4O15021 2626 aa4.79□□□□□ -1.64
SNX13-213ENST00000611725 RNASE3P12724 160 aaKnown RBP4.79□□□□□ -1.64
SNX13-213ENST00000611725 PSMB8P28062 276 aa4.79□□□□□ -1.64
SNX13-213ENST00000611725 RHOHQ15669 191 aa4.79□□□□□ -1.64
SNX13-213ENST00000611725 NRACQ8N912 160 aa4.79□□□□□ -1.64
SNX13-213ENST00000611725 TIMM21Q9BVV7 248 aa4.79□□□□□ -1.64
SNX13-213ENST00000611725 COL6A3P12111 3177 aa4.78□□□□□ -1.64
SNX13-213ENST00000611725 C12orf74Q32Q52 190 aa4.78□□□□□ -1.64
SNX13-213ENST00000611725 PHLDA1Q8WV24 401 aaPredicted RBP4.78□□□□□ -1.64
SNX13-213ENST00000611725 TOMM6Q96B49 74 aa4.78□□□□□ -1.64
SNX13-213ENST00000611725 DNAH14Q0VDD8 3507 aa4.78□□□□□ -1.64
SNX13-213ENST00000611725 IGKV3OR2-268A0A0C4DH90 116 aa4.78□□□□□ -1.64
SNX13-213ENST00000611725 IGHV3-53P01767 116 aa4.78□□□□□ -1.64
SNX13-213ENST00000611725 IGLL5B9A064 214 aa4.78□□□□□ -1.64
SNX13-213ENST00000611725 CMC4P56277 68 aaPredicted RBP4.78□□□□□ -1.64
SNX13-213ENST00000611725 CEND1Q8N111 149 aa4.78□□□□□ -1.64
SNX13-213ENST00000611725 HHLA3Q9XRX5 114 aa4.78□□□□□ -1.64
SNX13-213ENST00000611725 TET2Q6N021 2002 aaPredicted RBP4.78□□□□□ -1.64
SNX13-213ENST00000611725 GCN1Q92616 2671 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms