RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	IGHV7-4-1	A0A0J9YVY3	117 aa		10.68	□□□□□ -0.7
MUC1-223	ENST00000611571	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.68	□□□□□ -0.7
MUC1-223	ENST00000611571	ZNF415	Q09FC8	603 aa		10.68	□□□□□ -0.7
MUC1-223	ENST00000611571	PRO1854	Q9UHT4	67 aa		10.68	□□□□□ -0.7
MUC1-223	ENST00000611571	LRP4	O75096	1905 aa		10.68	□□□□□ -0.7
MUC1-223	ENST00000611571	BOD1L2	Q8IYS8	172 aa		10.68	□□□□□ -0.7
MUC1-223	ENST00000611571	COPS9	Q8WXC6	57 aa		10.68	□□□□□ -0.7
MUC1-223	ENST00000611571	NDUFA12	Q9UI09	145 aa		10.68	□□□□□ -0.7
MUC1-223	ENST00000611571		F8W1H4	67 aa		10.68	□□□□□ -0.7
MUC1-223	ENST00000611571	NPB	Q8NG41	125 aa		10.68	□□□□□ -0.7
MUC1-223	ENST00000611571		A0A0J9YXV3	536 aa		10.67	□□□□□ -0.7
MUC1-223	ENST00000611571	ODF1	Q14990	250 aa		10.67	□□□□□ -0.7
MUC1-223	ENST00000611571	TMEM190	Q8WZ59	177 aa		10.67	□□□□□ -0.7
MUC1-223	ENST00000611571	OPRPN	Q99935	248 aa	Predicted RBP	10.67	□□□□□ -0.7
MUC1-223	ENST00000611571	ATXN8	Q156A1	80 aa		10.67	□□□□□ -0.7
MUC1-223	ENST00000611571	PTH2	Q96A98	100 aa		10.67	□□□□□ -0.7
MUC1-223	ENST00000611571	INS-IGF2	F8WCM5	200 aa		10.67	□□□□□ -0.7
MUC1-223	ENST00000611571	GAS8-AS1	O95177	125 aa		10.66	□□□□□ -0.7
MUC1-223	ENST00000611571	PFN2	P35080	140 aa		10.66	□□□□□ -0.7
MUC1-223	ENST00000611571	ADORA2A-AS1	P86434	159 aa		10.66	□□□□□ -0.7
MUC1-223	ENST00000611571	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.66	□□□□□ -0.7
MUC1-223	ENST00000611571	IGKV2D-26	A0A0A0MRZ7	120 aa		10.66	□□□□□ -0.7
MUC1-223	ENST00000611571	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.66	□□□□□ -0.7
MUC1-223	ENST00000611571		I3L3M4	83 aa		10.66	□□□□□ -0.7
MUC1-223	ENST00000611571	SIVA1	O15304	175 aa		10.66	□□□□□ -0.7
MUC1-223	ENST00000611571	MORN3	Q6PF18	240 aa	Predicted RBP	10.66	□□□□□ -0.7
MUC1-223	ENST00000611571	RS1	O15537	224 aa		10.66	□□□□□ -0.7
MUC1-223	ENST00000611571	DEFB112	Q30KQ8	113 aa		10.66	□□□□□ -0.7
MUC1-223	ENST00000611571	NTN5	Q8WTR8	489 aa	Predicted RBP	10.65	□□□□□ -0.7
MUC1-223	ENST00000611571	C20orf78	Q9BR46	151 aa		10.65	□□□□□ -0.71
MUC1-223	ENST00000611571	LINC00574	Q9H8X3	128 aa		10.65	□□□□□ -0.71
MUC1-223	ENST00000611571	IGHV4-30-2	A0A087WSY4	118 aa		10.64	□□□□□ -0.71
MUC1-223	ENST00000611571	C6orf226	Q5I0X4	101 aa		10.64	□□□□□ -0.71
MUC1-223	ENST00000611571	DAND5	Q8N907	189 aa		10.64	□□□□□ -0.71
MUC1-223	ENST00000611571	APRG1	Q8IVJ8	170 aa		10.64	□□□□□ -0.71
MUC1-223	ENST00000611571	MAL	P21145	153 aa		10.64	□□□□□ -0.71
MUC1-223	ENST00000611571	DSP	P15924	2871 aa	Known RBP	10.64	□□□□□ -0.71
MUC1-223	ENST00000611571	RBAKDN	A6NC62	111 aa		10.63	□□□□□ -0.71
MUC1-223	ENST00000611571	SLC25A20	O43772	301 aa		10.63	□□□□□ -0.71
MUC1-223	ENST00000611571	SUMO4	Q6EEV6	95 aa		10.63	□□□□□ -0.71
MUC1-223	ENST00000611571	GAGE7	O76087	117 aa		10.63	□□□□□ -0.71
MUC1-223	ENST00000611571	INS	P01308	110 aa		10.63	□□□□□ -0.71
MUC1-223	ENST00000611571	GAGE12F	P0CL80	117 aa		10.63	□□□□□ -0.71
MUC1-223	ENST00000611571	GAGE12G	P0CL81	117 aa		10.63	□□□□□ -0.71
MUC1-223	ENST00000611571	GAGE12I	P0CL82	117 aa		10.63	□□□□□ -0.71
MUC1-223	ENST00000611571	CPAMD8	Q8IZJ3	1885 aa		10.63	□□□□□ -0.71
MUC1-223	ENST00000611571		A0A096LPF7	62 aa		10.63	□□□□□ -0.71
MUC1-223	ENST00000611571	CFAP161	Q6P656	301 aa		10.63	□□□□□ -0.71
MUC1-223	ENST00000611571	PPDPFL	Q8WWR9	84 aa		10.63	□□□□□ -0.71
MUC1-223	ENST00000611571	TRBV20-1	A0A075B6N2	111 aa		10.62	□□□□□ -0.71
MUC1-223	ENST00000611571	FOXI2	Q6ZQN5	318 aa		10.62	□□□□□ -0.71
MUC1-223	ENST00000611571	TET2	Q6N021	2002 aa	Predicted RBP	10.62	□□□□□ -0.71
MUC1-223	ENST00000611571		A4D1N5	150 aa		10.62	□□□□□ -0.71
MUC1-223	ENST00000611571		Q6ZQT7	251 aa		10.62	□□□□□ -0.71
MUC1-223	ENST00000611571	ZNF493	Q6ZR52	646 aa		10.62	□□□□□ -0.71
MUC1-223	ENST00000611571	LINC01356	Q8N9X3	169 aa		10.62	□□□□□ -0.71
MUC1-223	ENST00000611571	TMEM141	Q96I45	108 aa		10.62	□□□□□ -0.71
MUC1-223	ENST00000611571	C11orf86	A6NJI1	115 aa		10.62	□□□□□ -0.71
MUC1-223	ENST00000611571	NXPH4	O95158	308 aa		10.62	□□□□□ -0.71
MUC1-223	ENST00000611571	ZFP2	Q6ZN57	461 aa		10.62	□□□□□ -0.71
MUC1-223	ENST00000611571	CRP	P02741	224 aa		10.61	□□□□□ -0.71
MUC1-223	ENST00000611571	C5orf56	Q8N8D9	126 aa		10.61	□□□□□ -0.71
MUC1-223	ENST00000611571	MDFIC	Q9P1T7	246 aa		10.61	□□□□□ -0.71
MUC1-223	ENST00000611571	IGLV2-11	P01706	119 aa		10.61	□□□□□ -0.71
MUC1-223	ENST00000611571	HOXD3	P31249	432 aa	Predicted RBP	10.61	□□□□□ -0.71
MUC1-223	ENST00000611571	MYCNOS	P40205	109 aa		10.61	□□□□□ -0.71
MUC1-223	ENST00000611571	GAGE2A	Q6NT46	116 aa		10.61	□□□□□ -0.71
MUC1-223	ENST00000611571	HIST2H2BD	Q6DRA6	164 aa		10.61	□□□□□ -0.71
MUC1-223	ENST00000611571	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.61	□□□□□ -0.71
MUC1-223	ENST00000611571		Q8N1Y9	231 aa		10.61	□□□□□ -0.71
MUC1-223	ENST00000611571	RASL10A	Q92737	203 aa		10.61	□□□□□ -0.71
MUC1-223	ENST00000611571	CCDC140	Q96MF4	163 aa		10.61	□□□□□ -0.71
MUC1-223	ENST00000611571	AGRN	O00468	2067 aa		10.6	□□□□□ -0.71
MUC1-223	ENST00000611571	HIST1H4A	P62805	103 aa	Known RBP	10.6	□□□□□ -0.71
MUC1-223	ENST00000611571	C16orf54	Q6UWD8	224 aa		10.6	□□□□□ -0.71
MUC1-223	ENST00000611571	SLURP1	P55000	103 aa		10.6	□□□□□ -0.71
MUC1-223	ENST00000611571	GAGE6	Q13070	117 aa		10.6	□□□□□ -0.71
MUC1-223	ENST00000611571	RBMY1B	A6NDE4	496 aa	Known RBP	10.59	□□□□□ -0.71
MUC1-223	ENST00000611571	RBMY1E	A6NEQ0	496 aa	Known RBP	10.59	□□□□□ -0.71
MUC1-223	ENST00000611571	RBMY1D	P0C7P1	496 aa	Known RBP	10.59	□□□□□ -0.71
MUC1-223	ENST00000611571	RBMY1A1	P0DJD3	496 aa	Known RBP	10.59	□□□□□ -0.71
MUC1-223	ENST00000611571	RBMY1C	P0DJD4	496 aa		10.59	□□□□□ -0.71
MUC1-223	ENST00000611571	CLPSL2	Q6UWE3	100 aa		10.59	□□□□□ -0.71
MUC1-223	ENST00000611571		Q8N976	141 aa		10.59	□□□□□ -0.71
MUC1-223	ENST00000611571	BAALC	Q8WXS3	180 aa		10.59	□□□□□ -0.71
MUC1-223	ENST00000611571	URB1-AS1	Q96HZ7	61 aa		10.59	□□□□□ -0.71
MUC1-223	ENST00000611571	CFC1B	P0CG36	223 aa		10.58	□□□□□ -0.71
MUC1-223	ENST00000611571	CFC1	P0CG37	223 aa		10.58	□□□□□ -0.71
MUC1-223	ENST00000611571	TAL2	Q16559	108 aa		10.58	□□□□□ -0.71
MUC1-223	ENST00000611571	SP5	Q6BEB4	398 aa	Predicted RBP	10.58	□□□□□ -0.71
MUC1-223	ENST00000611571	MAPKAPK5-AS1	Q8N8E1	139 aa		10.58	□□□□□ -0.71
MUC1-223	ENST00000611571	PRO3102	Q9H379	93 aa		10.58	□□□□□ -0.72
MUC1-223	ENST00000611571	MRPL53	Q96EL3	112 aa	Known RBP	10.58	□□□□□ -0.72
MUC1-223	ENST00000611571	PRB1	P04280	392 aa		10.58	□□□□□ -0.72
MUC1-223	ENST00000611571	MUSTN1	Q8IVN3	82 aa		10.58	□□□□□ -0.72
MUC1-223	ENST00000611571		H3BMM0	161 aa		10.57	□□□□□ -0.72
MUC1-223	ENST00000611571	UBE2W	Q96B02	151 aa		10.57	□□□□□ -0.72
MUC1-223	ENST00000611571	SMAD5-AS1	Q9Y6J3	95 aa		10.57	□□□□□ -0.72
MUC1-223	ENST00000611571	CRYGB	P07316	175 aa		10.57	□□□□□ -0.72
MUC1-223	ENST00000611571	NBL1	P41271	181 aa		10.57	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 159 ms