RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 C1orf43Q9BWL3 253 aa9.08□□□□□ -0.96
TP53-219ENST00000610538 SIGLEC8Q9NYZ4 499 aa9.08□□□□□ -0.96
TP53-219ENST00000610538 XCL2Q9UBD3 114 aa9.08□□□□□ -0.96
TP53-219ENST00000610538 TRBV7-9A0A0J9YWB2 115 aa9.07□□□□□ -0.96
TP53-219ENST00000610538 CRXO43186 299 aaPredicted RBP9.07□□□□□ -0.96
TP53-219ENST00000610538 IGLV1-51P01701 117 aa9.07□□□□□ -0.96
TP53-219ENST00000610538 MRPL51Q4U2R6 128 aaKnown RBP9.07□□□□□ -0.96
TP53-219ENST00000610538 LINC00482Q8N8I6 264 aa9.07□□□□□ -0.96
TP53-219ENST00000610538 TRAV26-2A0A0B4J265 109 aa9.07□□□□□ -0.96
TP53-219ENST00000610538 GATA1P15976 413 aaPredicted RBP9.07□□□□□ -0.96
TP53-219ENST00000610538 HINT1P49773 126 aaPredicted RBP9.07□□□□□ -0.96
TP53-219ENST00000610538 ZNF493Q6ZR52 646 aa9.07□□□□□ -0.96
TP53-219ENST00000610538 STHQ8IWL8 128 aa9.07□□□□□ -0.96
TP53-219ENST00000610538 CNFNQ9BYD5 112 aa9.07□□□□□ -0.96
TP53-219ENST00000610538 IGHV3OR16-12A0A075B7B8 117 aa9.06□□□□□ -0.96
TP53-219ENST00000610538 TRAV25A0A0B4J276 109 aa9.06□□□□□ -0.96
TP53-219ENST00000610538 A0A1B0GW15 77 aa9.06□□□□□ -0.96
TP53-219ENST00000610538 OR5AL1P0C617 328 aa9.06□□□□□ -0.96
TP53-219ENST00000610538 CKS2P33552 79 aa9.06□□□□□ -0.96
TP53-219ENST00000610538 PTTG1IPP53801 180 aa9.06□□□□□ -0.96
TP53-219ENST00000610538 TRAV2A0A0B4J234 112 aa9.06□□□□□ -0.96
TP53-219ENST00000610538 C14orf178Q8N769 122 aaPredicted RBP9.06□□□□□ -0.96
TP53-219ENST00000610538 JPT2Q9H910 190 aa9.06□□□□□ -0.96
TP53-219ENST00000610538 RNF185Q96GF1 192 aa9.05□□□□□ -0.96
TP53-219ENST00000610538 URB1-AS1Q96HZ7 61 aa9.05□□□□□ -0.96
TP53-219ENST00000610538 ODF3Q96PU9 254 aa9.05□□□□□ -0.96
TP53-219ENST00000610538 TMEM70Q9BUB7 260 aa9.05□□□□□ -0.96
TP53-219ENST00000610538 TMEM191AQ9H0A3 160 aa9.05□□□□□ -0.96
TP53-219ENST00000610538 SNAI2O43623 268 aa9.05□□□□□ -0.96
TP53-219ENST00000610538 KRTAP24-1Q3LI83 254 aa9.05□□□□□ -0.96
TP53-219ENST00000610538 CITED1Q99966 193 aa9.05□□□□□ -0.96
TP53-219ENST00000610538 COX11Q9Y6N1 276 aa9.05□□□□□ -0.96
TP53-219ENST00000610538 IGHV1OR15-1A0A075B7D0 117 aa9.04□□□□□ -0.96
TP53-219ENST00000610538 A4D1N5 150 aa9.04□□□□□ -0.96
TP53-219ENST00000610538 CBY3A6NI87 242 aa9.04□□□□□ -0.96
TP53-219ENST00000610538 IGLL1P15814 213 aa9.04□□□□□ -0.96
TP53-219ENST00000610538 RPL35AP18077 110 aaKnown RBP9.04□□□□□ -0.96
TP53-219ENST00000610538 PRELID3AQ96N28 172 aa9.04□□□□□ -0.96
TP53-219ENST00000610538 MALP21145 153 aa9.04□□□□□ -0.96
TP53-219ENST00000610538 IFI27P40305 119 aaPredicted RBP9.03□□□□□ -0.96
TP53-219ENST00000610538 ORMDL3Q8N138 153 aa9.03□□□□□ -0.96
TP53-219ENST00000610538 CHCHD1Q96BP2 118 aaKnown RBP9.03□□□□□ -0.96
TP53-219ENST00000610538 AP5S1Q9NUS5 200 aa9.03□□□□□ -0.96
TP53-219ENST00000610538 A0A087WWL8 130 aa9.03□□□□□ -0.96
TP53-219ENST00000610538 CCL25O15444 150 aa9.03□□□□□ -0.96
TP53-219ENST00000610538 NPYP01303 97 aa9.03□□□□□ -0.96
TP53-219ENST00000610538 UBE2V1Q13404 147 aa9.03□□□□□ -0.96
TP53-219ENST00000610538 GATD1Q8NB37 220 aa9.03□□□□□ -0.96
TP53-219ENST00000610538 LINC01587Q99440 93 aa9.03□□□□□ -0.96
TP53-219ENST00000610538 IGHV3-16A0A0C4DH30 117 aa9.02□□□□□ -0.97
TP53-219ENST00000610538 SMIM15Q7Z3B0 74 aa9.02□□□□□ -0.97
TP53-219ENST00000610538 PRSS3P2Q8NHM4 247 aa9.02□□□□□ -0.97
TP53-219ENST00000610538 NACAE9PAV3 2078 aa9.02□□□□□ -0.97
TP53-219ENST00000610538 PRIMA1Q86XR5 153 aa9.02□□□□□ -0.97
TP53-219ENST00000610538 DEFB125Q8N687 156 aa9.02□□□□□ -0.97
TP53-219ENST00000610538 ST20Q9HBF5 79 aa9.02□□□□□ -0.97
TP53-219ENST00000610538 SCRT2Q9NQ03 307 aa9.02□□□□□ -0.97
TP53-219ENST00000610538 MGPP08493 103 aa9.01□□□□□ -0.97
TP53-219ENST00000610538 FAM74A4Q5TZK3 123 aa9.01□□□□□ -0.97
TP53-219ENST00000610538 DEFB104AQ8WTQ1 72 aa9.01□□□□□ -0.97
TP53-219ENST00000610538 C19orf73Q9NVV2 129 aa9.01□□□□□ -0.97
TP53-219ENST00000610538 LEPROTL1O95214 131 aa9.01□□□□□ -0.97
TP53-219ENST00000610538 PCP4P48539 62 aa9.01□□□□□ -0.97
TP53-219ENST00000610538 CACNG7P62955 275 aa9.01□□□□□ -0.97
TP53-219ENST00000610538 BEAN1Q3B7T3 259 aa9.01□□□□□ -0.97
TP53-219ENST00000610538 SPATA12Q7Z6I5 190 aa9.01□□□□□ -0.97
TP53-219ENST00000610538 NOTCH1P46531 2555 aa9□□□□□ -0.97
TP53-219ENST00000610538 IGHV4-4A0A075B6R2 117 aa9□□□□□ -0.97
TP53-219ENST00000610538 HSBP1L1C9JCN9 74 aa9□□□□□ -0.97
TP53-219ENST00000610538 SYS1-DBNDD2H3BUS1 97 aa9□□□□□ -0.97
TP53-219ENST00000610538 TRPT1Q86TN4 253 aaKnown RBP9□□□□□ -0.97
TP53-219ENST00000610538 IGHV1-24A0A0C4DH33 117 aa9□□□□□ -0.97
TP53-219ENST00000610538 A8MTW9 85 aa9□□□□□ -0.97
TP53-219ENST00000610538 ZNF876PQ49A33 203 aa9□□□□□ -0.97
TP53-219ENST00000610538 AZU1P20160 251 aa8.99□□□□□ -0.97
TP53-219ENST00000610538 Q6ZVH6 145 aa8.99□□□□□ -0.97
TP53-219ENST00000610538 U3KQK5 164 aa8.99□□□□□ -0.97
TP53-219ENST00000610538 F5H697 171 aa8.98□□□□□ -0.97
TP53-219ENST00000610538 EIF4EBP3O60516 100 aaPredicted RBP8.98□□□□□ -0.97
TP53-219ENST00000610538 LINC00173Q6ZV60 143 aa8.98□□□□□ -0.97
TP53-219ENST00000610538 OR4C5Q8NGB2 326 aa8.98□□□□□ -0.97
TP53-219ENST00000610538 MAP1LC3CQ9BXW4 147 aa8.98□□□□□ -0.97
TP53-219ENST00000610538 IGHV3-73A0A0B4J1V6 119 aa8.98□□□□□ -0.97
TP53-219ENST00000610538 K7EP13 123 aa8.98□□□□□ -0.97
TP53-219ENST00000610538 INSP01308 110 aa8.98□□□□□ -0.97
TP53-219ENST00000610538 SLC25A34Q6PIV7 304 aa8.98□□□□□ -0.97
TP53-219ENST00000610538 PET117Q6UWS5 81 aa8.98□□□□□ -0.97
TP53-219ENST00000610538 FA2HQ7L5A8 372 aa8.98□□□□□ -0.97
TP53-219ENST00000610538 C1orf158Q8N1D5 194 aa8.98□□□□□ -0.97
TP53-219ENST00000610538 GIG44P09565 113 aaPredicted RBP8.97□□□□□ -0.97
TP53-219ENST00000610538 VAMP3Q15836 100 aa8.97□□□□□ -0.97
TP53-219ENST00000610538 C3orf56Q8N813 242 aa8.97□□□□□ -0.97
TP53-219ENST00000610538 RPL39LQ96EH5 51 aaKnown RBP8.97□□□□□ -0.97
TP53-219ENST00000610538 C9orf85Q96MD7 179 aa8.97□□□□□ -0.97
TP53-219ENST00000610538 AP1S3Q96PC3 154 aa8.97□□□□□ -0.97
TP53-219ENST00000610538 DPH3P1Q9H4G8 78 aa8.97□□□□□ -0.97
TP53-219ENST00000610538 HSPB8Q9UJY1 196 aa8.97□□□□□ -0.97
TP53-219ENST00000610538 hDV102S1A0JD36 115 aa8.97□□□□□ -0.97
TP53-219ENST00000610538 SMIM17P0DL12 118 aa8.97□□□□□ -0.97
TP53-219ENST00000610538 OR2K2Q8NGT1 345 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms