RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 GAGE1Q13065 139 aa11.14□□□□□ -0.63
CCDC12-211ENST00000604367 RASL10AQ92737 203 aa11.14□□□□□ -0.63
CCDC12-211ENST00000604367 MAP6D1Q9H9H5 199 aa11.14□□□□□ -0.63
CCDC12-211ENST00000604367 TP73-AS1Q9UF72 201 aa11.14□□□□□ -0.63
CCDC12-211ENST00000604367 SMIM17P0DL12 118 aa11.14□□□□□ -0.63
CCDC12-211ENST00000604367 HLA-DRB4P13762 266 aa11.14□□□□□ -0.63
CCDC12-211ENST00000604367 FCER1GP30273 86 aa11.14□□□□□ -0.63
CCDC12-211ENST00000604367 HLA-DRB4X5D2U9 266 aa11.14□□□□□ -0.63
CCDC12-211ENST00000604367 H3BMM0 161 aa11.13□□□□□ -0.63
CCDC12-211ENST00000604367 RBMY1A1P0DJD3 496 aaKnown RBP11.13□□□□□ -0.63
CCDC12-211ENST00000604367 RBMY1CP0DJD4 496 aa11.13□□□□□ -0.63
CCDC12-211ENST00000604367 HNRNPA3P51991 378 aaKnown RBP11.13□□□□□ -0.63
CCDC12-211ENST00000604367 HILS1P60008 231 aa11.13□□□□□ -0.63
CCDC12-211ENST00000604367 FHL3Q13643 280 aa11.13□□□□□ -0.63
CCDC12-211ENST00000604367 RBMY1FQ15415 496 aaKnown RBP11.13□□□□□ -0.63
CCDC12-211ENST00000604367 RNASE8Q8TDE3 154 aaKnown RBP11.13□□□□□ -0.63
CCDC12-211ENST00000604367 RBMY1BA6NDE4 496 aaKnown RBP11.13□□□□□ -0.63
CCDC12-211ENST00000604367 RBMY1EA6NEQ0 496 aaKnown RBP11.13□□□□□ -0.63
CCDC12-211ENST00000604367 NXPH4O95158 308 aa11.13□□□□□ -0.63
CCDC12-211ENST00000604367 RBMY1DP0C7P1 496 aaKnown RBP11.13□□□□□ -0.63
CCDC12-211ENST00000604367 SUMO2P61956 95 aaKnown RBP11.13□□□□□ -0.63
CCDC12-211ENST00000604367 BATFQ16520 125 aa11.13□□□□□ -0.63
CCDC12-211ENST00000604367 TSSC4Q9Y5U2 329 aaPredicted RBP11.13□□□□□ -0.63
CCDC12-211ENST00000604367 NIPBLQ6KC79 2804 aaeCLIP11.12□□□□□ -0.636e-6■■■□□ 17.7
CCDC12-211ENST00000604367 LAGE3Q14657 143 aa11.12□□□□□ -0.63
CCDC12-211ENST00000604367 FAM74A4Q5TZK3 123 aa11.12□□□□□ -0.63
CCDC12-211ENST00000604367 C16orf95Q9H693 158 aa11.12□□□□□ -0.63
CCDC12-211ENST00000604367 CBY3A6NI87 242 aa11.11□□□□□ -0.63
CCDC12-211ENST00000604367 LY6G6DO95868 133 aa11.11□□□□□ -0.63
CCDC12-211ENST00000604367 C9orf85Q96MD7 179 aa11.11□□□□□ -0.63
CCDC12-211ENST00000604367 SMIM2Q9BVW6 85 aa11.11□□□□□ -0.63
CCDC12-211ENST00000604367 KIF25-AS1Q9Y6Z4 181 aa11.11□□□□□ -0.63
CCDC12-211ENST00000604367 SETXQ7Z333 2677 aaKnown RBP11.11□□□□□ -0.63
CCDC12-211ENST00000604367 OTOGQ6ZRI0 2925 aa11.11□□□□□ -0.63
CCDC12-211ENST00000604367 TRAV2A0A0B4J234 112 aa11.11□□□□□ -0.63
CCDC12-211ENST00000604367 F5H697 171 aa11.11□□□□□ -0.63
CCDC12-211ENST00000604367 PRM2P04554 102 aa11.11□□□□□ -0.63
CCDC12-211ENST00000604367 LINC00315P59091 139 aa11.11□□□□□ -0.63
CCDC12-211ENST00000604367 ZNF256Q9Y2P7 627 aaPredicted RBP11.11□□□□□ -0.63
CCDC12-211ENST00000604367 DEFB125Q8N687 156 aa11.1□□□□□ -0.63
CCDC12-211ENST00000604367 ST20Q9HBF5 79 aa11.1□□□□□ -0.63
CCDC12-211ENST00000604367 TCTAP57738 103 aa11.1□□□□□ -0.63
CCDC12-211ENST00000604367 SPAG8Q99932 426 aaPredicted RBP11.1□□□□□ -0.63
CCDC12-211ENST00000604367 NUDT3O95989 172 aa11.09□□□□□ -0.63
CCDC12-211ENST00000604367 LGALS9BQ3B8N2 356 aa11.09□□□□□ -0.63
CCDC12-211ENST00000604367 LGALS9CQ6DKI2 356 aa11.09□□□□□ -0.63
CCDC12-211ENST00000604367 DEFB104AQ8WTQ1 72 aa11.09□□□□□ -0.63
CCDC12-211ENST00000604367 PRSS1P07477 247 aa11.09□□□□□ -0.63
CCDC12-211ENST00000604367 DKK2Q9UBU2 259 aa11.09□□□□□ -0.63
CCDC12-211ENST00000604367 SUMO4Q6EEV6 95 aa11.08□□□□□ -0.64
CCDC12-211ENST00000604367 NEGR1Q7Z3B1 354 aa11.08□□□□□ -0.64
CCDC12-211ENST00000604367 SYT8Q8NBV8 401 aa11.08□□□□□ -0.64
CCDC12-211ENST00000604367 C20orf78Q9BR46 151 aa11.08□□□□□ -0.64
CCDC12-211ENST00000604367 TMEM160Q9NX00 188 aa11.08□□□□□ -0.64
CCDC12-211ENST00000604367 NSUN5P1Q3KNT7 163 aa11.08□□□□□ -0.64
CCDC12-211ENST00000604367 ZNF876PQ49A33 203 aa11.08□□□□□ -0.64
CCDC12-211ENST00000604367 ODF3L2Q3SX64 289 aa11.07□□□□□ -0.64
CCDC12-211ENST00000604367 STPG4Q8N801 248 aa11.07□□□□□ -0.64
CCDC12-211ENST00000604367 TRGV11A0A075B6L2 103 aa11.07□□□□□ -0.64
CCDC12-211ENST00000604367 POM121L12Q8N7R1 296 aa11.07□□□□□ -0.64
CCDC12-211ENST00000604367 CSTL1Q9H114 145 aa11.07□□□□□ -0.64
CCDC12-211ENST00000604367 BAHCC1Q9P281 2608 aa11.07□□□□□ -0.64
CCDC12-211ENST00000604367 A8MTW9 85 aa11.06□□□□□ -0.64
CCDC12-211ENST00000604367 SAP30O75446 220 aa11.06□□□□□ -0.64
CCDC12-211ENST00000604367 ZNF56Q15929 161 aa11.06□□□□□ -0.64
CCDC12-211ENST00000604367 TRAV25A0A0B4J276 109 aa11.05□□□□□ -0.64
CCDC12-211ENST00000604367 PPP1R17O96001 155 aa11.05□□□□□ -0.64
CCDC12-211ENST00000604367 JMJD1CQ15652 2540 aa11.05□□□□□ -0.64
CCDC12-211ENST00000604367 TMEM238C9JI98 176 aa11.05□□□□□ -0.64
CCDC12-211ENST00000604367 INAFM1C9JVW0 142 aa11.05□□□□□ -0.64
CCDC12-211ENST00000604367 CRYGDP07320 174 aa11.05□□□□□ -0.64
CCDC12-211ENST00000604367 PROK1P58294 105 aa11.05□□□□□ -0.64
CCDC12-211ENST00000604367 ORMDL2Q53FV1 153 aa11.05□□□□□ -0.64
CCDC12-211ENST00000604367 SLC25A34Q6PIV7 304 aa11.05□□□□□ -0.64
CCDC12-211ENST00000604367 NOTCH3Q9UM47 2321 aa11.05□□□□□ -0.64
CCDC12-211ENST00000604367 ATP5LO75964 103 aa11.04□□□□□ -0.64
CCDC12-211ENST00000604367 LINC01587Q99440 93 aa11.04□□□□□ -0.64
CCDC12-211ENST00000604367 OR11H12B2RN74 326 aa11.04□□□□□ -0.64
CCDC12-211ENST00000604367 HINT1P49773 126 aaPredicted RBP11.04□□□□□ -0.64
CCDC12-211ENST00000604367 MRPL52Q86TS9 123 aaKnown RBP11.04□□□□□ -0.64
CCDC12-211ENST00000604367 JMJD8Q96S16 334 aa11.04□□□□□ -0.64
CCDC12-211ENST00000604367 XCL2Q9UBD3 114 aa11.04□□□□□ -0.64
CCDC12-211ENST00000604367 MRPS16Q9Y3D3 137 aaKnown RBP11.04□□□□□ -0.64
CCDC12-211ENST00000604367 ADARB2-AS1A8MUL3 147 aa11.03□□□□□ -0.64
CCDC12-211ENST00000604367 NDUFA7O95182 113 aa11.03□□□□□ -0.64
CCDC12-211ENST00000604367 STHQ8IWL8 128 aa11.03□□□□□ -0.64
CCDC12-211ENST00000604367 IGHV3-73A0A0B4J1V6 119 aa11.02□□□□□ -0.65
CCDC12-211ENST00000604367 IGHV3OR16-12A0A075B7B8 117 aa11.01□□□□□ -0.65
CCDC12-211ENST00000604367 SDHAF1A6NFY7 115 aa11.01□□□□□ -0.65
CCDC12-211ENST00000604367 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.01□□□□□ -0.65
CCDC12-211ENST00000604367 INSP01308 110 aa11.01□□□□□ -0.65
CCDC12-211ENST00000604367 C2orf66Q6UXQ4 117 aa11.01□□□□□ -0.65
CCDC12-211ENST00000604367 SCGB3A1Q96QR1 104 aa11.01□□□□□ -0.65
CCDC12-211ENST00000604367 FN1P02751 2386 aaKnown RBP11.01□□□□□ -0.65
CCDC12-211ENST00000604367 M0QY20 66 aa11.01□□□□□ -0.65
CCDC12-211ENST00000604367 KRTAP10-3P60369 221 aa11.01□□□□□ -0.65
CCDC12-211ENST00000604367 COX8AP10176 69 aa11□□□□□ -0.65
CCDC12-211ENST00000604367 POLR2KP53803 58 aaKnown RBP11□□□□□ -0.65
CCDC12-211ENST00000604367 TOMM6Q96B49 74 aa11□□□□□ -0.65
CCDC12-211ENST00000604367 C2CD3Q4AC94 2353 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms