RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 VCYO14598 125 aa10.76□□□□□ -0.69
SMG9-211ENST00000601170 DSCR9P59020 149 aa10.76□□□□□ -0.69
SMG9-211ENST00000601170 RPL39P62891 51 aaKnown RBP10.76□□□□□ -0.69
SMG9-211ENST00000601170 C9orf85Q96MD7 179 aa10.76□□□□□ -0.69
SMG9-211ENST00000601170 MDFICQ9P1T7 246 aa10.76□□□□□ -0.69
SMG9-211ENST00000601170 SDHAF1A6NFY7 115 aa10.75□□□□□ -0.69
SMG9-211ENST00000601170 ZNF815PA8K554 130 aa10.75□□□□□ -0.69
SMG9-211ENST00000601170 SCGB2A2Q13296 93 aa10.75□□□□□ -0.69
SMG9-211ENST00000601170 LINC01356Q8N9X3 169 aa10.75□□□□□ -0.69
SMG9-211ENST00000601170 FLNCQ14315 2725 aa10.75□□□□□ -0.69
SMG9-211ENST00000601170 IGLV4-69A0A075B6H9 119 aa10.75□□□□□ -0.69
SMG9-211ENST00000601170 C11orf86A6NJI1 115 aa10.75□□□□□ -0.69
SMG9-211ENST00000601170 K7EQG2 157 aa10.75□□□□□ -0.69
SMG9-211ENST00000601170 LGALS9O00182 355 aa10.75□□□□□ -0.69
SMG9-211ENST00000601170 EMP1P54849 157 aa10.75□□□□□ -0.69
SMG9-211ENST00000601170 SYNJ2BPP57105 145 aa10.75□□□□□ -0.69
SMG9-211ENST00000601170 DOPEY1Q5JWR5 2465 aa10.75□□□□□ -0.69
SMG9-211ENST00000601170 TMEM89A2RUT3 159 aa10.74□□□□□ -0.69
SMG9-211ENST00000601170 LINC01549A6NIU2 74 aa10.74□□□□□ -0.69
SMG9-211ENST00000601170 SPINK13Q1W4C9 94 aa10.74□□□□□ -0.69
SMG9-211ENST00000601170 CD300EQ496F6 205 aaPredicted RBP10.74□□□□□ -0.69
SMG9-211ENST00000601170 Q8N1Y9 231 aa10.74□□□□□ -0.69
SMG9-211ENST00000601170 UTP20O75691 2785 aaKnown RBP10.74□□□□□ -0.69
SMG9-211ENST00000601170 COX6B1P14854 86 aa10.74□□□□□ -0.69
SMG9-211ENST00000601170 PMVKQ15126 192 aa10.74□□□□□ -0.69
SMG9-211ENST00000601170 FOXI2Q6ZQN5 318 aa10.74□□□□□ -0.69
SMG9-211ENST00000601170 TRBV27A0A0K0K1C4 114 aa10.73□□□□□ -0.69
SMG9-211ENST00000601170 A0A1B0GWB2 263 aa10.73□□□□□ -0.69
SMG9-211ENST00000601170 ZNF56Q15929 161 aa10.73□□□□□ -0.69
SMG9-211ENST00000601170 SCGB1D4Q6XE38 83 aa10.73□□□□□ -0.69
SMG9-211ENST00000601170 SYT8Q8NBV8 401 aa10.73□□□□□ -0.69
SMG9-211ENST00000601170 MAPK1IP1LQ8NDC0 245 aa10.73□□□□□ -0.69
SMG9-211ENST00000601170 PLEKHB2Q96CS7 222 aa10.73□□□□□ -0.69
SMG9-211ENST00000601170 TRBV6-5A0A0K0K1A5 114 aa10.73□□□□□ -0.69
SMG9-211ENST00000601170 RIPPLY3P57055 190 aa10.73□□□□□ -0.69
SMG9-211ENST00000601170 TMEM141Q96I45 108 aa10.73□□□□□ -0.69
SMG9-211ENST00000601170 DUX5Q96PT3 197 aa10.73□□□□□ -0.69
SMG9-211ENST00000601170 TIMM17AQ99595 171 aa10.73□□□□□ -0.69
SMG9-211ENST00000601170 IGHV1OR15-1A0A075B7D0 117 aa10.72□□□□□ -0.69
SMG9-211ENST00000601170 TGFAP01135 160 aa10.72□□□□□ -0.69
SMG9-211ENST00000601170 RRN3P1Q2M238 152 aa10.72□□□□□ -0.69
SMG9-211ENST00000601170 PAPPA-AS1Q5QFB9 102 aa10.72□□□□□ -0.69
SMG9-211ENST00000601170 KLHL30-AS1Q8NEE0 82 aa10.72□□□□□ -0.69
SMG9-211ENST00000601170 ZNF256Q9Y2P7 627 aaPredicted RBP10.72□□□□□ -0.69
SMG9-211ENST00000601170 USP9XQ93008 2570 aaPredicted RBP10.72□□□□□ -0.69
SMG9-211ENST00000601170 A0A096LNT2 108 aa10.72□□□□□ -0.69
SMG9-211ENST00000601170 COTL1Q14019 142 aa10.72□□□□□ -0.69
SMG9-211ENST00000601170 MORN3Q6PF18 240 aaPredicted RBP10.72□□□□□ -0.69
SMG9-211ENST00000601170 M0QY20 66 aa10.71□□□□□ -0.69
SMG9-211ENST00000601170 HERVK_113P61574 105 aa10.71□□□□□ -0.69
SMG9-211ENST00000601170 RPL24P83731 157 aaKnown RBP10.71□□□□□ -0.69
SMG9-211ENST00000601170 VPREB3Q9UKI3 123 aa10.7□□□□□ -0.7
SMG9-211ENST00000601170 TEX48A0A1B0GUV7 120 aa10.7□□□□□ -0.7
SMG9-211ENST00000601170 H3BMG7 143 aa10.7□□□□□ -0.7
SMG9-211ENST00000601170 J3QLI3 93 aa10.7□□□□□ -0.7
SMG9-211ENST00000601170 HOXA3O43365 443 aaPredicted RBP10.69□□□□□ -0.7
SMG9-211ENST00000601170 HOXD3P31249 432 aaPredicted RBP10.69□□□□□ -0.7
SMG9-211ENST00000601170 AMTNQ6UX39 209 aa10.69□□□□□ -0.7
SMG9-211ENST00000601170 IGSF10Q6WRI0 2623 aa10.69□□□□□ -0.7
SMG9-211ENST00000601170 ELANEP08246 267 aa10.69□□□□□ -0.7
SMG9-211ENST00000601170 SRSF9Q13242 221 aaKnown RBP eCLIP10.69□□□□□ -0.7
SMG9-211ENST00000601170 ZNF876PQ49A33 203 aa10.69□□□□□ -0.7
SMG9-211ENST00000601170 ZNRF2Q8NHG8 242 aa10.69□□□□□ -0.7
SMG9-211ENST00000601170 F8W1H4 67 aa10.68□□□□□ -0.7
SMG9-211ENST00000601170 TMEM170BQ5T4T1 132 aa10.68□□□□□ -0.7
SMG9-211ENST00000601170 TRPT1Q86TN4 253 aaKnown RBP10.68□□□□□ -0.7
SMG9-211ENST00000601170 ZNF702PQ9H963 129 aa10.68□□□□□ -0.7
SMG9-211ENST00000601170 TMEM238LA0A1B0GVL6 79 aa10.68□□□□□ -0.7
SMG9-211ENST00000601170 A6NJY4 79 aa10.68□□□□□ -0.7
SMG9-211ENST00000601170 WFDC2Q14508 124 aa10.68□□□□□ -0.7
SMG9-211ENST00000601170 NSUN5P1Q3KNT7 163 aa10.68□□□□□ -0.7
SMG9-211ENST00000601170 PGPEP1Q9NXJ5 209 aa10.68□□□□□ -0.7
SMG9-211ENST00000601170 DOPEY2Q9Y3R5 2298 aa10.67□□□□□ -0.7
SMG9-211ENST00000601170 TSPEAR-AS2P59090 65 aa10.67□□□□□ -0.7
SMG9-211ENST00000601170 UBE2E2Q96LR5 201 aa10.67□□□□□ -0.7
SMG9-211ENST00000601170 ZANQ9Y493 2812 aa10.67□□□□□ -0.7
SMG9-211ENST00000601170 A0A0J9YY99 117 aa10.67□□□□□ -0.7
SMG9-211ENST00000601170 RHOHQ15669 191 aa10.67□□□□□ -0.7
SMG9-211ENST00000601170 FBN2P35556 2912 aa10.66□□□□□ -0.7
SMG9-211ENST00000601170 Q6YL49 198 aa10.66□□□□□ -0.7
SMG9-211ENST00000601170 OPRPNQ99935 248 aaPredicted RBP10.66□□□□□ -0.7
SMG9-211ENST00000601170 MRPL16Q9NX20 251 aaKnown RBP10.66□□□□□ -0.7
SMG9-211ENST00000601170 ANKRD17O75179 2603 aaKnown RBP10.66□□□□□ -0.7
SMG9-211ENST00000601170 TRGV11A0A075B6L2 103 aa10.66□□□□□ -0.7
SMG9-211ENST00000601170 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
SMG9-211ENST00000601170 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
SMG9-211ENST00000601170 P0DMU3 169 aa10.66□□□□□ -0.7
SMG9-211ENST00000601170 FAM231AP0DMU4 169 aa10.66□□□□□ -0.7
SMG9-211ENST00000601170 FAM231CP0DMU5 169 aa10.66□□□□□ -0.7
SMG9-211ENST00000601170 UBE2D1P51668 147 aa10.66□□□□□ -0.7
SMG9-211ENST00000601170 RBMY1FQ15415 496 aaKnown RBP10.66□□□□□ -0.7
SMG9-211ENST00000601170 TCTEX1D4Q5JR98 221 aa10.66□□□□□ -0.7
SMG9-211ENST00000601170 MTURNQ8N3F0 131 aa10.66□□□□□ -0.7
SMG9-211ENST00000601170 BEX4Q9NWD9 120 aaPredicted RBP10.65□□□□□ -0.7
SMG9-211ENST00000601170 SORL1Q92673 2214 aa10.65□□□□□ -0.7
SMG9-211ENST00000601170 RNF152Q8N8N0 203 aa10.65□□□□□ -0.71
SMG9-211ENST00000601170 SPANXB1Q9NS25 103 aaPredicted RBP10.65□□□□□ -0.71
SMG9-211ENST00000601170 KNCNA6PVL3 124 aa10.64□□□□□ -0.71
SMG9-211ENST00000601170 I3L3M4 83 aa10.64□□□□□ -0.71
SMG9-211ENST00000601170 FSHBP01225 129 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms