RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 I3L2K1 104 aa7.4□□□□□ -1.22
NFKB1-212ENST00000600343 BAALC-AS2P0C853 105 aa7.4□□□□□ -1.22
NFKB1-212ENST00000600343 RPL39P62891 51 aaKnown RBP7.4□□□□□ -1.22
NFKB1-212ENST00000600343 WDFY3Q8IZQ1 3526 aa7.4□□□□□ -1.22
NFKB1-212ENST00000600343 IGHV3OR16-10A0A075B7F0 116 aa7.4□□□□□ -1.22
NFKB1-212ENST00000600343 SLC25A45Q8N413 288 aa7.4□□□□□ -1.22
NFKB1-212ENST00000600343 KNCNA6PVL3 124 aa7.4□□□□□ -1.23
NFKB1-212ENST00000600343 M0R381 172 aa7.4□□□□□ -1.23
NFKB1-212ENST00000600343 BUB3O43684 328 aa7.4□□□□□ -1.23
NFKB1-212ENST00000600343 TMEM30BQ3MIR4 351 aa7.4□□□□□ -1.23
NFKB1-212ENST00000600343 Q6JHZ5 121 aa7.4□□□□□ -1.23
NFKB1-212ENST00000600343 IGHV4-4A0A075B6R2 117 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 DNAL4O96015 105 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 TMEM61Q8N0U2 210 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 C20orf197Q8N268 126 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 CEP250Q9BV73 2442 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 RBMY1BA6NDE4 496 aaKnown RBP7.39□□□□□ -1.23
NFKB1-212ENST00000600343 RBMY1EA6NEQ0 496 aaKnown RBP7.39□□□□□ -1.23
NFKB1-212ENST00000600343 NTN3O00634 580 aaPredicted RBP7.39□□□□□ -1.23
NFKB1-212ENST00000600343 RBMY1DP0C7P1 496 aaKnown RBP7.39□□□□□ -1.23
NFKB1-212ENST00000600343 RBMY1A1P0DJD3 496 aaKnown RBP7.39□□□□□ -1.23
NFKB1-212ENST00000600343 RBMY1CP0DJD4 496 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 CD59P13987 128 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 RBMY1FQ15415 496 aaKnown RBP7.39□□□□□ -1.23
NFKB1-212ENST00000600343 MRGPRG-AS1Q2M3A8 158 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 FP248Q71RG6 208 aaPredicted RBP7.39□□□□□ -1.23
NFKB1-212ENST00000600343 DEFB108BQ8NET1 73 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 PRR14LQ5THK1 2151 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 RNF223E7ERA6 249 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 GFRALQ6UXV0 394 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 LINC00482Q8N8I6 264 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 TIMM17AQ99595 171 aa7.39□□□□□ -1.23
NFKB1-212ENST00000600343 IGHV3-72A0A0B4J1Y9 119 aa7.38□□□□□ -1.23
NFKB1-212ENST00000600343 IGHG2P01859 326 aa7.38□□□□□ -1.23
NFKB1-212ENST00000600343 MRPS21P82921 87 aaKnown RBP7.38□□□□□ -1.23
NFKB1-212ENST00000600343 C6orf226Q5I0X4 101 aa7.38□□□□□ -1.23
NFKB1-212ENST00000600343 LYZL6O75951 148 aa7.38□□□□□ -1.23
NFKB1-212ENST00000600343 LITAFQ99732 161 aa7.38□□□□□ -1.23
NFKB1-212ENST00000600343 MYO15AQ9UKN7 3530 aa7.38□□□□□ -1.23
NFKB1-212ENST00000600343 IGHV1OR15-9A0A0B4J2B8 117 aa7.38□□□□□ -1.23
NFKB1-212ENST00000600343 C10orf142B7Z368 130 aa7.38□□□□□ -1.23
NFKB1-212ENST00000600343 GHRHP01286 108 aa7.38□□□□□ -1.23
NFKB1-212ENST00000600343 ZNF580Q9UK33 172 aa7.38□□□□□ -1.23
NFKB1-212ENST00000600343 GVINP1Q7Z2Y8 2422 aa7.38□□□□□ -1.23
NFKB1-212ENST00000600343 ADAMTSL4-AS1Q5T5F5 129 aa7.37□□□□□ -1.23
NFKB1-212ENST00000600343 PRAC2D3DTV9 90 aa7.37□□□□□ -1.23
NFKB1-212ENST00000600343 COX7A2LO14548 114 aa7.37□□□□□ -1.23
NFKB1-212ENST00000600343 MIAQ16674 131 aa7.37□□□□□ -1.23
NFKB1-212ENST00000600343 RNF182Q8N6D2 247 aa7.37□□□□□ -1.23
NFKB1-212ENST00000600343 ICE1Q9Y2F5 2266 aa7.37□□□□□ -1.23
NFKB1-212ENST00000600343 FRYQ5TBA9 3013 aa7.37□□□□□ -1.23
NFKB1-212ENST00000600343 A0A0U1RRA0 63 aa7.37□□□□□ -1.23
NFKB1-212ENST00000600343 PPP1R17O96001 155 aa7.37□□□□□ -1.23
NFKB1-212ENST00000600343 CCL13Q99616 98 aa7.37□□□□□ -1.23
NFKB1-212ENST00000600343 S4R3C0 116 aa7.37□□□□□ -1.23
NFKB1-212ENST00000600343 LINC00574Q9H8X3 128 aa7.36□□□□□ -1.23
NFKB1-212ENST00000600343 SLC25A15Q9Y619 301 aa7.36□□□□□ -1.23
NFKB1-212ENST00000600343 XCL1P47992 114 aa7.36□□□□□ -1.23
NFKB1-212ENST00000600343 XCL2Q9UBD3 114 aa7.36□□□□□ -1.23
NFKB1-212ENST00000600343 TEX22C9J3V5 150 aa7.36□□□□□ -1.23
NFKB1-212ENST00000600343 K7EIM0 57 aa7.36□□□□□ -1.23
NFKB1-212ENST00000600343 DKK4Q9UBT3 224 aa7.36□□□□□ -1.23
NFKB1-212ENST00000600343 PRRC2AP48634 2157 aaKnown RBP7.36□□□□□ -1.23
NFKB1-212ENST00000600343 CHD7Q9P2D1 2997 aa7.35□□□□□ -1.23
NFKB1-212ENST00000600343 IGLV3-19P01714 112 aa7.35□□□□□ -1.23
NFKB1-212ENST00000600343 CCL21O00585 134 aa7.35□□□□□ -1.23
NFKB1-212ENST00000600343 NXPH4O95158 308 aa7.35□□□□□ -1.23
NFKB1-212ENST00000600343 IGHV3-30-3P0DP02 117 aa7.35□□□□□ -1.23
NFKB1-212ENST00000600343 FANCD2OSQ96PS1 177 aa7.35□□□□□ -1.23
NFKB1-212ENST00000600343 CCL3L1P16619 93 aa7.35□□□□□ -1.23
NFKB1-212ENST00000600343 GAFA1Q96PS6 74 aa7.35□□□□□ -1.23
NFKB1-212ENST00000600343 RNF7Q9UBF6 113 aa7.35□□□□□ -1.23
NFKB1-212ENST00000600343 FAM222AQ5U5X8 452 aa7.34□□□□□ -1.23
NFKB1-212ENST00000600343 SPINK14Q6IE38 97 aa7.34□□□□□ -1.23
NFKB1-212ENST00000600343 RNASE6Q93091 150 aaKnown RBP7.34□□□□□ -1.23
NFKB1-212ENST00000600343 OPRPNQ99935 248 aaPredicted RBP7.34□□□□□ -1.23
NFKB1-212ENST00000600343 UBE2D4Q9Y2X8 147 aa7.34□□□□□ -1.23
NFKB1-212ENST00000600343 S100A4P26447 101 aaKnown RBP7.34□□□□□ -1.23
NFKB1-212ENST00000600343 RETNQ9HD89 108 aa7.34□□□□□ -1.23
NFKB1-212ENST00000600343 IGHV1-2P23083 117 aa7.34□□□□□ -1.24
NFKB1-212ENST00000600343 COPS9Q8WXC6 57 aa7.34□□□□□ -1.24
NFKB1-212ENST00000600343 LINC00846Q9NV44 126 aa7.34□□□□□ -1.24
NFKB1-212ENST00000600343 LINC00474Q9P2X8 69 aa7.34□□□□□ -1.24
NFKB1-212ENST00000600343 Q6ZS52 159 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 GPHB5Q86YW7 130 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 NDUFA12Q9UI09 145 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 PHLDA3Q9Y5J5 127 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 SMAD5-AS1Q9Y6J3 95 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 A0A0J9YXV3 536 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 H7BZZ5 65 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 SPRY3O43610 288 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 LHBP01229 141 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 MRPS36P82909 103 aaKnown RBP7.33□□□□□ -1.24
NFKB1-212ENST00000600343 NDPQ00604 133 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 FAM19A1Q7Z5A9 133 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 C22orf24Q9Y442 160 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 TRAV23DV6A0A075B6W5 121 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 LINC01565O15544 149 aa7.33□□□□□ -1.24
NFKB1-212ENST00000600343 HILS1P60008 231 aa7.32□□□□□ -1.24
NFKB1-212ENST00000600343 PMAIP1Q13794 54 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms