RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 ASIPP42127 132 aa8.32□□□□□ -1.08
TRIM28-212ENST00000597995 LAGE3Q14657 143 aa8.32□□□□□ -1.08
TRIM28-212ENST00000597995 RHOHQ15669 191 aa8.32□□□□□ -1.08
TRIM28-212ENST00000597995 OR10J3Q5JRS4 329 aa8.32□□□□□ -1.08
TRIM28-212ENST00000597995 PIK3CD-AS1Q5SR53 167 aa8.32□□□□□ -1.08
TRIM28-212ENST00000597995 LELP1Q5T871 98 aa8.32□□□□□ -1.08
TRIM28-212ENST00000597995 TCEAL7Q9BRU2 100 aa8.32□□□□□ -1.08
TRIM28-212ENST00000597995 DNAH8Q96JB1 4490 aa8.32□□□□□ -1.08
TRIM28-212ENST00000597995 SCO2A0A1W2PP80 73 aa8.31□□□□□ -1.08
TRIM28-212ENST00000597995 ARMS2P0C7Q2 107 aa8.31□□□□□ -1.08
TRIM28-212ENST00000597995 LINC00694P0DN24 101 aa8.31□□□□□ -1.08
TRIM28-212ENST00000597995 MGST1P10620 155 aaKnown RBP8.31□□□□□ -1.08
TRIM28-212ENST00000597995 UBE2G1P62253 170 aa8.31□□□□□ -1.08
TRIM28-212ENST00000597995 CCL20P78556 96 aa8.31□□□□□ -1.08
TRIM28-212ENST00000597995 LINC01559Q495D7 138 aa8.31□□□□□ -1.08
TRIM28-212ENST00000597995 FAM162BQ5T6X4 162 aa8.31□□□□□ -1.08
TRIM28-212ENST00000597995 Q6ZSA8 131 aa8.31□□□□□ -1.08
TRIM28-212ENST00000597995 TMSB15BA0A087X1C1 80 aa8.3□□□□□ -1.08
TRIM28-212ENST00000597995 A8MWV9 139 aa8.3□□□□□ -1.08
TRIM28-212ENST00000597995 IGHV3-30P01768 117 aa8.3□□□□□ -1.08
TRIM28-212ENST00000597995 IGHV3-33P01772 117 aa8.3□□□□□ -1.08
TRIM28-212ENST00000597995 H2AFB1P0C5Y9 115 aa8.3□□□□□ -1.08
TRIM28-212ENST00000597995 IGHV3-30-3P0DP02 117 aa8.3□□□□□ -1.08
TRIM28-212ENST00000597995 IGHV3-30-5P0DP03 117 aa8.3□□□□□ -1.08
TRIM28-212ENST00000597995 AKR1C3P42330 323 aa8.3□□□□□ -1.08
TRIM28-212ENST00000597995 EIF5AP63241 154 aaKnown RBP8.3□□□□□ -1.08
TRIM28-212ENST00000597995 LGALSLQ3ZCW2 172 aaPredicted RBP8.3□□□□□ -1.08
TRIM28-212ENST00000597995 ZFP2Q6ZN57 461 aa8.3□□□□□ -1.08
TRIM28-212ENST00000597995 C14orf178Q8N769 122 aaPredicted RBP8.3□□□□□ -1.08
TRIM28-212ENST00000597995 DEFB104AQ8WTQ1 72 aa8.3□□□□□ -1.08
TRIM28-212ENST00000597995 MLST8Q9BVC4 326 aa8.3□□□□□ -1.08
TRIM28-212ENST00000597995 GTSF1LQ9H1H1 148 aa8.3□□□□□ -1.08
TRIM28-212ENST00000597995 TPT1P13693 172 aaKnown RBP8.29□□□□□ -1.08
TRIM28-212ENST00000597995 ATP6V0E2Q8NHE4 81 aa8.29□□□□□ -1.08
TRIM28-212ENST00000597995 TRAV8-3A0A0A6YYJ7 113 aa8.28□□□□□ -1.08
TRIM28-212ENST00000597995 GAGE12JA6NER3 117 aa8.28□□□□□ -1.08
TRIM28-212ENST00000597995 RPL19P84098 196 aaKnown RBP8.28□□□□□ -1.08
TRIM28-212ENST00000597995 GAGE1Q13065 139 aa8.28□□□□□ -1.08
TRIM28-212ENST00000597995 GAGE4Q13068 117 aa8.28□□□□□ -1.08
TRIM28-212ENST00000597995 GAGE5Q13069 117 aa8.28□□□□□ -1.08
TRIM28-212ENST00000597995 GAGE13Q4V321 117 aa8.28□□□□□ -1.08
TRIM28-212ENST00000597995 LINC00528Q8N1L1 170 aa8.28□□□□□ -1.08
TRIM28-212ENST00000597995 Q8N3U1 123 aa8.28□□□□□ -1.08
TRIM28-212ENST00000597995 WFDC2Q14508 124 aa8.27□□□□□ -1.09
TRIM28-212ENST00000597995 TCTE3Q8IZS6 198 aa8.27□□□□□ -1.09
TRIM28-212ENST00000597995 SFRP2Q96HF1 295 aa8.27□□□□□ -1.09
TRIM28-212ENST00000597995 hCG_2014768A0A024R1R8 64 aa8.26□□□□□ -1.09
TRIM28-212ENST00000597995 A0A087WWL8 130 aa8.26□□□□□ -1.09
TRIM28-212ENST00000597995 TRAV1-1A0A0B4J248 108 aa8.26□□□□□ -1.09
TRIM28-212ENST00000597995 M0R381 172 aa8.26□□□□□ -1.09
TRIM28-212ENST00000597995 S100A9P06702 114 aaKnown RBP8.26□□□□□ -1.09
TRIM28-212ENST00000597995 TOR2AQ5JU69 321 aa8.26□□□□□ -1.09
TRIM28-212ENST00000597995 Q6ZNX1 250 aa8.26□□□□□ -1.09
TRIM28-212ENST00000597995 BAGE2Q86Y30 109 aa8.26□□□□□ -1.09
TRIM28-212ENST00000597995 SYT8Q8NBV8 401 aa8.26□□□□□ -1.09
TRIM28-212ENST00000597995 DERL1Q9BUN8 251 aa8.26□□□□□ -1.09
TRIM28-212ENST00000597995 PHLDA3Q9Y5J5 127 aa8.26□□□□□ -1.09
TRIM28-212ENST00000597995 COX11Q9Y6N1 276 aa8.26□□□□□ -1.09
TRIM28-212ENST00000597995 SULT1A2P50226 295 aa8.25□□□□□ -1.09
TRIM28-212ENST00000597995 SERTAD4-AS1Q5TG53 156 aa8.25□□□□□ -1.09
TRIM28-212ENST00000597995 FAM74A4Q5TZK3 123 aa8.25□□□□□ -1.09
TRIM28-212ENST00000597995 C11orf52Q96A22 123 aa8.25□□□□□ -1.09
TRIM28-212ENST00000597995 GNG13Q9P2W3 67 aa8.25□□□□□ -1.09
TRIM28-212ENST00000597995 RHODO00212 210 aa8.24□□□□□ -1.09
TRIM28-212ENST00000597995 IGLV2-8P01709 118 aa8.24□□□□□ -1.09
TRIM28-212ENST00000597995 RPL35P42766 123 aaKnown RBP8.24□□□□□ -1.09
TRIM28-212ENST00000597995 EIF5AL1Q6IS14 154 aaKnown RBP8.24□□□□□ -1.09
TRIM28-212ENST00000597995 ZFP82Q8N141 532 aa8.24□□□□□ -1.09
TRIM28-212ENST00000597995 OR10AG1Q8NH19 301 aa8.24□□□□□ -1.09
TRIM28-212ENST00000597995 SSBP4Q9BWG4 385 aaPredicted RBP8.24□□□□□ -1.09
TRIM28-212ENST00000597995 A0A087WWC5 75 aa8.23□□□□□ -1.09
TRIM28-212ENST00000597995 TEX46H3BTG2 121 aa8.23□□□□□ -1.09
TRIM28-212ENST00000597995 SNAI2O43623 268 aa8.23□□□□□ -1.09
TRIM28-212ENST00000597995 CXCL1P09341 107 aa8.23□□□□□ -1.09
TRIM28-212ENST00000597995 RAB5CP51148 216 aa8.23□□□□□ -1.09
TRIM28-212ENST00000597995 PRR27Q6MZM9 219 aa8.23□□□□□ -1.09
TRIM28-212ENST00000597995 DAZ4Q86SG3 579 aaKnown RBP8.23□□□□□ -1.09
TRIM28-212ENST00000597995 RMI2Q96E14 147 aa8.23□□□□□ -1.09
TRIM28-212ENST00000597995 MANBALQ9NQG1 85 aa8.23□□□□□ -1.09
TRIM28-212ENST00000597995 DAZ3Q9NR90 486 aaKnown RBP8.23□□□□□ -1.09
TRIM28-212ENST00000597995 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.22□□□□□ -1.09
TRIM28-212ENST00000597995 MUC21A0A0G2JKD1 596 aa8.22□□□□□ -1.09
TRIM28-212ENST00000597995 MUC21A0A140T8X8 626 aa8.22□□□□□ -1.09
TRIM28-212ENST00000597995 LECT2O14960 151 aa8.22□□□□□ -1.09
TRIM28-212ENST00000597995 SCXQ7RTU7 201 aa8.22□□□□□ -1.09
TRIM28-212ENST00000597995 AKAP14Q86UN6 197 aa8.22□□□□□ -1.09
TRIM28-212ENST00000597995 Q8N976 141 aa8.22□□□□□ -1.09
TRIM28-212ENST00000597995 BAALCQ8WXS3 180 aa8.22□□□□□ -1.09
TRIM28-212ENST00000597995 RAB19A4D1S5 217 aa8.21□□□□□ -1.1
TRIM28-212ENST00000597995 RBFOX3A6NFN3 312 aa8.21□□□□□ -1.1
TRIM28-212ENST00000597995 OXTP01178 125 aa8.21□□□□□ -1.1
TRIM28-212ENST00000597995 OR5AL1P0C617 328 aa8.21□□□□□ -1.1
TRIM28-212ENST00000597995 CENPWQ5EE01 88 aa8.21□□□□□ -1.1
TRIM28-212ENST00000597995 SLC51BQ86UW2 128 aa8.21□□□□□ -1.1
TRIM28-212ENST00000597995 CHAC1Q9BUX1 264 aa8.21□□□□□ -1.1
TRIM28-212ENST00000597995 TRBV20OR9-2A0A075B6H5 130 aa8.2□□□□□ -1.1
TRIM28-212ENST00000597995 C19orf71A6NCJ1 209 aa8.2□□□□□ -1.1
TRIM28-212ENST00000597995 GZMBP10144 247 aa8.2□□□□□ -1.1
TRIM28-212ENST00000597995 KRTAP10-4P60372 401 aaPredicted RBP8.2□□□□□ -1.1
TRIM28-212ENST00000597995 UBE2D3P61077 147 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms