RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 CYB561D1Q8N8Q1 229 aa11.36□□□□□ -0.59
PNKP-210ENST00000597965 ATP6V0E2Q8NHE4 81 aa11.36□□□□□ -0.59
PNKP-210ENST00000597965 SUN5Q8TC36 379 aa11.36□□□□□ -0.59
PNKP-210ENST00000597965 RS1O15537 224 aa11.35□□□□□ -0.59
PNKP-210ENST00000597965 IGHV3-30P01768 117 aa11.35□□□□□ -0.59
PNKP-210ENST00000597965 IGHV3-33P01772 117 aa11.35□□□□□ -0.59
PNKP-210ENST00000597965 IGHV3-30-3P0DP02 117 aa11.35□□□□□ -0.59
PNKP-210ENST00000597965 IGHV3-30-5P0DP03 117 aa11.35□□□□□ -0.59
PNKP-210ENST00000597965 MEF2BQ02080 365 aaPredicted RBP11.35□□□□□ -0.59
PNKP-210ENST00000597965 PTH2Q96A98 100 aa11.35□□□□□ -0.59
PNKP-210ENST00000597965 COX11Q9Y6N1 276 aa11.35□□□□□ -0.59
PNKP-210ENST00000597965 SNAPINO95295 136 aa11.34□□□□□ -0.59
PNKP-210ENST00000597965 HAMPP81172 84 aa11.34□□□□□ -0.59
PNKP-210ENST00000597965 CLRN3Q8NCR9 226 aa11.34□□□□□ -0.59
PNKP-210ENST00000597965 NKX6-2Q9C056 277 aaPredicted RBP11.34□□□□□ -0.59
PNKP-210ENST00000597965 TRAV8-1A0A0A6YYK1 113 aa11.33□□□□□ -0.6
PNKP-210ENST00000597965 TMEM250H0YL14 139 aa11.33□□□□□ -0.6
PNKP-210ENST00000597965 TVP23CQ96ET8 276 aa11.33□□□□□ -0.6
PNKP-210ENST00000597965 TMEM167BQ9NRX6 74 aa11.33□□□□□ -0.6
PNKP-210ENST00000597965 VPS13BQ7Z7G8 4022 aa11.32□□□□□ -0.6
PNKP-210ENST00000597965 A0A087WWC5 75 aa11.32□□□□□ -0.6
PNKP-210ENST00000597965 UBE2G2P60604 165 aa11.32□□□□□ -0.6
PNKP-210ENST00000597965 PIK3CD-AS1Q5SR53 167 aa11.32□□□□□ -0.6
PNKP-210ENST00000597965 C5orf17Q8NAS9 161 aa11.32□□□□□ -0.6
PNKP-210ENST00000597965 DEFB104AQ8WTQ1 72 aa11.32□□□□□ -0.6
PNKP-210ENST00000597965 ARL2-SNX15V9GYD0 113 aa11.32□□□□□ -0.6
PNKP-210ENST00000597965 FAM74A7A6NL05 159 aa11.31□□□□□ -0.6
PNKP-210ENST00000597965 A8MWV9 139 aa11.31□□□□□ -0.6
PNKP-210ENST00000597965 CEBPGP53567 150 aa11.31□□□□□ -0.6
PNKP-210ENST00000597965 CST9LP1Q5W188 147 aa11.31□□□□□ -0.6
PNKP-210ENST00000597965 ZFP2Q6ZN57 461 aa11.31□□□□□ -0.6
PNKP-210ENST00000597965 RMI2Q96E14 147 aa11.31□□□□□ -0.6
PNKP-210ENST00000597965 C9orf85Q96MD7 179 aa11.31□□□□□ -0.6
PNKP-210ENST00000597965 IGHV3-73A0A0B4J1V6 119 aa11.3□□□□□ -0.6
PNKP-210ENST00000597965 GGTLC3B5MD39 225 aa11.3□□□□□ -0.6
PNKP-210ENST00000597965 PDE6DO43924 150 aa11.3□□□□□ -0.6
PNKP-210ENST00000597965 GCGP01275 180 aa11.3□□□□□ -0.6
PNKP-210ENST00000597965 TCRAP04437 139 aa11.3□□□□□ -0.6
PNKP-210ENST00000597965 SMUG1Q53HV7 270 aa11.3□□□□□ -0.6
PNKP-210ENST00000597965 SAPCD1Q5SSQ6 148 aa11.3□□□□□ -0.6
PNKP-210ENST00000597965 Q6ZSA8 131 aa11.3□□□□□ -0.6
PNKP-210ENST00000597965 FAM30AQ9NZY2 134 aa11.3□□□□□ -0.6
PNKP-210ENST00000597965 GNG5P63218 68 aa11.29□□□□□ -0.6
PNKP-210ENST00000597965 FAM74A3Q4VXF1 159 aa11.29□□□□□ -0.6
PNKP-210ENST00000597965 PSG8Q9UQ74 426 aa11.29□□□□□ -0.6
PNKP-210ENST00000597965 URGCP-MRPS24S4R325 110 aa11.29□□□□□ -0.6
PNKP-210ENST00000597965 A0A1W2PRE2 83 aa11.28□□□□□ -0.6
PNKP-210ENST00000597965 KRTAP29-1A8MX34 341 aaPredicted RBP11.28□□□□□ -0.6
PNKP-210ENST00000597965 S100A4P26447 101 aaKnown RBP11.28□□□□□ -0.6
PNKP-210ENST00000597965 LINC00528Q8N1L1 170 aa11.28□□□□□ -0.6
PNKP-210ENST00000597965 C7orf77A4D0Y5 90 aa11.27□□□□□ -0.61
PNKP-210ENST00000597965 PGPEP1LA6NFU8 196 aa11.27□□□□□ -0.61
PNKP-210ENST00000597965 ZNF727A8MUV8 499 aa11.27□□□□□ -0.61
PNKP-210ENST00000597965 M0R036 132 aa11.27□□□□□ -0.61
PNKP-210ENST00000597965 FLI1Q01543 452 aaPredicted RBP11.27□□□□□ -0.61
PNKP-210ENST00000597965 Q8N976 141 aa11.27□□□□□ -0.61
PNKP-210ENST00000597965 TMEM75Q8N9X5 138 aa11.27□□□□□ -0.61
PNKP-210ENST00000597965 C11orf52Q96A22 123 aa11.27□□□□□ -0.61
PNKP-210ENST00000597965 SGK494Q96LW2 274 aa11.27□□□□□ -0.61
PNKP-210ENST00000597965 PARLQ9H300 379 aa11.27□□□□□ -0.61
PNKP-210ENST00000597965 RNASE3P12724 160 aaKnown RBP11.26□□□□□ -0.61
PNKP-210ENST00000597965 ZNF80P51504 273 aaPredicted RBP11.26□□□□□ -0.61
PNKP-210ENST00000597965 RHEBQ15382 184 aa11.26□□□□□ -0.61
PNKP-210ENST00000597965 TMEM241Q24JQ0 296 aa11.26□□□□□ -0.61
PNKP-210ENST00000597965 SMIM7Q9BQ49 75 aa11.26□□□□□ -0.61
PNKP-210ENST00000597965 EPDR1Q9UM22 224 aa11.26□□□□□ -0.61
PNKP-210ENST00000597965 SCO2A0A1W2PP80 73 aa11.25□□□□□ -0.61
PNKP-210ENST00000597965 SUMO1P63165 101 aaKnown RBP11.25□□□□□ -0.61
PNKP-210ENST00000597965 PRNTQ86SH4 94 aa11.25□□□□□ -0.61
PNKP-210ENST00000597965 RPS10P5Q9NQ39 176 aa11.25□□□□□ -0.61
PNKP-210ENST00000597965 C11orf21Q9P2W6 132 aa11.25□□□□□ -0.61
PNKP-210ENST00000597965 NAT8Q9UHE5 227 aa11.25□□□□□ -0.61
PNKP-210ENST00000597965 GAGE12JA6NER3 117 aa11.24□□□□□ -0.61
PNKP-210ENST00000597965 RHODO00212 210 aa11.24□□□□□ -0.61
PNKP-210ENST00000597965 ASIPP42127 132 aa11.24□□□□□ -0.61
PNKP-210ENST00000597965 AKR1C3P42330 323 aa11.24□□□□□ -0.61
PNKP-210ENST00000597965 PNRC1Q12796 327 aaPredicted RBP11.24□□□□□ -0.61
PNKP-210ENST00000597965 GAGE1Q13065 139 aa11.24□□□□□ -0.61
PNKP-210ENST00000597965 GAGE4Q13068 117 aa11.24□□□□□ -0.61
PNKP-210ENST00000597965 GAGE5Q13069 117 aa11.24□□□□□ -0.61
PNKP-210ENST00000597965 ELOBQ15370 118 aa11.24□□□□□ -0.61
PNKP-210ENST00000597965 ZNF674Q2M3X9 581 aa11.24□□□□□ -0.61
PNKP-210ENST00000597965 GAGE13Q4V321 117 aa11.24□□□□□ -0.61
PNKP-210ENST00000597965 SERTAD4-AS1Q5TG53 156 aa11.24□□□□□ -0.61
PNKP-210ENST00000597965 KCNIP4Q6PIL6 250 aa11.24□□□□□ -0.61
PNKP-210ENST00000597965 SYT8Q8NBV8 401 aa11.24□□□□□ -0.61
PNKP-210ENST00000597965 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.23□□□□□ -0.61
PNKP-210ENST00000597965 FABP5P3A8MUU1 101 aa11.23□□□□□ -0.61
PNKP-210ENST00000597965 B4DEV8 164 aa11.23□□□□□ -0.61
PNKP-210ENST00000597965 IGLV2-11P01706 119 aa11.23□□□□□ -0.61
PNKP-210ENST00000597965 LINC00694P0DN24 101 aa11.23□□□□□ -0.61
PNKP-210ENST00000597965 DAZ4Q86SG3 579 aaKnown RBP11.23□□□□□ -0.61
PNKP-210ENST00000597965 CBLN2Q8IUK8 224 aa11.23□□□□□ -0.61
PNKP-210ENST00000597965 DAZ3Q9NR90 486 aaKnown RBP11.23□□□□□ -0.61
PNKP-210ENST00000597965 SMCO4Q9NRQ5 59 aa11.23□□□□□ -0.61
PNKP-210ENST00000597965 IL36BQ9NZH7 164 aa11.23□□□□□ -0.61
PNKP-210ENST00000597965 LECT2O14960 151 aa11.22□□□□□ -0.61
PNKP-210ENST00000597965 RPL23P62829 140 aaKnown RBP11.22□□□□□ -0.61
PNKP-210ENST00000597965 WFDC2Q14508 124 aa11.22□□□□□ -0.61
PNKP-210ENST00000597965 CHCHD7Q9BUK0 85 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms