RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 PDE6DO43924 150 aa12.35□□□□□ -0.43
PDE4C-208ENST00000595343 GCHFRP30047 84 aa12.35□□□□□ -0.43
PDE4C-208ENST00000595343 PNRC1Q12796 327 aaPredicted RBP12.35□□□□□ -0.43
PDE4C-208ENST00000595343 LAGE3Q14657 143 aa12.35□□□□□ -0.43
PDE4C-208ENST00000595343 CMTM2Q8TAZ6 248 aa12.35□□□□□ -0.43
PDE4C-208ENST00000595343 DEFB104AQ8WTQ1 72 aa12.35□□□□□ -0.43
PDE4C-208ENST00000595343 TVP23CQ96ET8 276 aa12.35□□□□□ -0.43
PDE4C-208ENST00000595343 PRADC1Q9BSG0 188 aa12.35□□□□□ -0.43
PDE4C-208ENST00000595343 TM2D2Q9BX73 214 aa12.35□□□□□ -0.43
PDE4C-208ENST00000595343 TRBV6-4A0A1B0GX49 114 aa12.34□□□□□ -0.43
PDE4C-208ENST00000595343 PGPA6NDG6 321 aa12.34□□□□□ -0.43
PDE4C-208ENST00000595343 HMGB3O15347 200 aaKnown RBP12.34□□□□□ -0.43
PDE4C-208ENST00000595343 RHOHQ15669 191 aa12.34□□□□□ -0.43
PDE4C-208ENST00000595343 ZNF876PQ49A33 203 aa12.34□□□□□ -0.43
PDE4C-208ENST00000595343 CFAP126Q5VTH2 177 aa12.34□□□□□ -0.43
PDE4C-208ENST00000595343 GOLT1AQ6ZVE7 132 aa12.34□□□□□ -0.43
PDE4C-208ENST00000595343 KCNS1Q96KK3 526 aa12.34□□□□□ -0.43
PDE4C-208ENST00000595343 B4DEV8 164 aa12.33□□□□□ -0.44
PDE4C-208ENST00000595343 RS1O15537 224 aa12.33□□□□□ -0.44
PDE4C-208ENST00000595343 PAGE4O60829 102 aa12.33□□□□□ -0.44
PDE4C-208ENST00000595343 GTSF1LQ9H1H1 148 aa12.33□□□□□ -0.44
PDE4C-208ENST00000595343 TRAV8-1A0A0A6YYK1 113 aa12.32□□□□□ -0.44
PDE4C-208ENST00000595343 IGHV3-73A0A0B4J1V6 119 aa12.32□□□□□ -0.44
PDE4C-208ENST00000595343 CIDEAO60543 219 aa12.32□□□□□ -0.44
PDE4C-208ENST00000595343 EIF3GO75821 320 aaKnown RBP eCLIP12.32□□□□□ -0.44
PDE4C-208ENST00000595343 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
PDE4C-208ENST00000595343 A0A087WWC5 75 aa12.31□□□□□ -0.44
PDE4C-208ENST00000595343 LECT2O14960 151 aa12.31□□□□□ -0.44
PDE4C-208ENST00000595343 Q8N3U1 123 aa12.31□□□□□ -0.44
PDE4C-208ENST00000595343 A0A1W2PRE2 83 aa12.3□□□□□ -0.44
PDE4C-208ENST00000595343 C7orf77A4D0Y5 90 aa12.3□□□□□ -0.44
PDE4C-208ENST00000595343 M0R036 132 aa12.3□□□□□ -0.44
PDE4C-208ENST00000595343 ARL6IP6Q8N6S5 226 aa12.3□□□□□ -0.44
PDE4C-208ENST00000595343 SMCO4Q9NRQ5 59 aa12.3□□□□□ -0.44
PDE4C-208ENST00000595343 NAT8Q9UHE5 227 aa12.3□□□□□ -0.44
PDE4C-208ENST00000595343 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.29□□□□□ -0.44
PDE4C-208ENST00000595343 FAM74A7A6NL05 159 aa12.29□□□□□ -0.44
PDE4C-208ENST00000595343 ZNF727A8MUV8 499 aa12.29□□□□□ -0.44
PDE4C-208ENST00000595343 C11orf52Q96A22 123 aa12.29□□□□□ -0.44
PDE4C-208ENST00000595343 SMIM7Q9BQ49 75 aa12.29□□□□□ -0.44
PDE4C-208ENST00000595343 TCEAL7Q9BRU2 100 aa12.29□□□□□ -0.44
PDE4C-208ENST00000595343 C11orf21Q9P2W6 132 aa12.29□□□□□ -0.44
PDE4C-208ENST00000595343 TRAV8-3A0A0A6YYJ7 113 aa12.28□□□□□ -0.44
PDE4C-208ENST00000595343 MGST1P10620 155 aaKnown RBP12.28□□□□□ -0.44
PDE4C-208ENST00000595343 GNG5P63218 68 aa12.28□□□□□ -0.44
PDE4C-208ENST00000595343 SERTAD4-AS1Q5TG53 156 aa12.28□□□□□ -0.44
PDE4C-208ENST00000595343 CST9LP1Q5W188 147 aa12.28□□□□□ -0.44
PDE4C-208ENST00000595343 C9orf85Q96MD7 179 aa12.28□□□□□ -0.44
PDE4C-208ENST00000595343 LRP1Q07954 4544 aaKnown RBP12.28□□□□□ -0.44
PDE4C-208ENST00000595343 HMCN2Q8NDA2 5059 aa12.27□□□□□ -0.45
PDE4C-208ENST00000595343 PGPEP1LA6NFU8 196 aa12.27□□□□□ -0.45
PDE4C-208ENST00000595343 ZNF80P51504 273 aaPredicted RBP12.27□□□□□ -0.45
PDE4C-208ENST00000595343 CEBPGP53567 150 aa12.27□□□□□ -0.45
PDE4C-208ENST00000595343 TMEM241Q24JQ0 296 aa12.27□□□□□ -0.45
PDE4C-208ENST00000595343 LINC01620Q4KN68 170 aa12.27□□□□□ -0.45
PDE4C-208ENST00000595343 SGK494Q96LW2 274 aa12.27□□□□□ -0.45
PDE4C-208ENST00000595343 PARLQ9H300 379 aa12.27□□□□□ -0.45
PDE4C-208ENST00000595343 RPS10P5Q9NQ39 176 aa12.27□□□□□ -0.45
PDE4C-208ENST00000595343 UBE2G2P60604 165 aa12.26□□□□□ -0.45
PDE4C-208ENST00000595343 SCXQ7RTU7 201 aa12.26□□□□□ -0.45
PDE4C-208ENST00000595343 DAZ4Q86SG3 579 aaKnown RBP12.26□□□□□ -0.45
PDE4C-208ENST00000595343 PTH2Q96A98 100 aa12.26□□□□□ -0.45
PDE4C-208ENST00000595343 NDFIP1Q9BT67 221 aa12.26□□□□□ -0.45
PDE4C-208ENST00000595343 DAZ3Q9NR90 486 aaKnown RBP12.26□□□□□ -0.45
PDE4C-208ENST00000595343 TMEM242Q9NWH2 141 aa12.26□□□□□ -0.45
PDE4C-208ENST00000595343 C15orf54Q8N8G6 183 aa12.25□□□□□ -0.45
PDE4C-208ENST00000595343 TMEM75Q8N9X5 138 aa12.25□□□□□ -0.45
PDE4C-208ENST00000595343 BAALCQ8WXS3 180 aa12.25□□□□□ -0.45
PDE4C-208ENST00000595343 CTDSP1Q9GZU7 261 aa12.25□□□□□ -0.45
PDE4C-208ENST00000595343 KRTAP10-4P60372 401 aaPredicted RBP12.24□□□□□ -0.45
PDE4C-208ENST00000595343 SYT8Q8NBV8 401 aa12.24□□□□□ -0.45
PDE4C-208ENST00000595343 GAGE12JA6NER3 117 aa12.23□□□□□ -0.45
PDE4C-208ENST00000595343 GGTLC3B5MD39 225 aa12.23□□□□□ -0.45
PDE4C-208ENST00000595343 GCGP01275 180 aa12.23□□□□□ -0.45
PDE4C-208ENST00000595343 LINC00694P0DN24 101 aa12.23□□□□□ -0.45
PDE4C-208ENST00000595343 RNASE3P12724 160 aaKnown RBP12.23□□□□□ -0.45
PDE4C-208ENST00000595343 GAGE1Q13065 139 aa12.23□□□□□ -0.45
PDE4C-208ENST00000595343 GAGE4Q13068 117 aa12.23□□□□□ -0.45
PDE4C-208ENST00000595343 GAGE5Q13069 117 aa12.23□□□□□ -0.45
PDE4C-208ENST00000595343 GAGE13Q4V321 117 aa12.23□□□□□ -0.45
PDE4C-208ENST00000595343 CBLN2Q8IUK8 224 aa12.23□□□□□ -0.45
PDE4C-208ENST00000595343 COX11Q9Y6N1 276 aa12.23□□□□□ -0.45
PDE4C-208ENST00000595343 SERTM2A0A1B0GWG4 89 aa12.22□□□□□ -0.45
PDE4C-208ENST00000595343 CHAC1Q9BUX1 264 aa12.22□□□□□ -0.45
PDE4C-208ENST00000595343 TCRAP04437 139 aa12.21□□□□□ -0.45
PDE4C-208ENST00000595343 RPL23P62829 140 aaKnown RBP12.21□□□□□ -0.45
PDE4C-208ENST00000595343 ZNF674Q2M3X9 581 aa12.21□□□□□ -0.45
PDE4C-208ENST00000595343 ZFP2Q6ZN57 461 aa12.21□□□□□ -0.45
PDE4C-208ENST00000595343 Q8N976 141 aa12.21□□□□□ -0.45
PDE4C-208ENST00000595343 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.21□□□□□ -0.45
PDE4C-208ENST00000595343 Q9UF83 564 aa12.21□□□□□ -0.45
PDE4C-208ENST00000595343 PSG8Q9UQ74 426 aa12.21□□□□□ -0.45
PDE4C-208ENST00000595343 UBR4Q5T4S7 5183 aa12.21□□□□□ -0.46
PDE4C-208ENST00000595343 OXTP01178 125 aa12.2□□□□□ -0.46
PDE4C-208ENST00000595343 MT-ND4LP03901 98 aa12.2□□□□□ -0.46
PDE4C-208ENST00000595343 C5orf17Q8NAS9 161 aa12.2□□□□□ -0.46
PDE4C-208ENST00000595343 ANAPC16Q96DE5 110 aa12.2□□□□□ -0.46
PDE4C-208ENST00000595343 SCO2A0A1W2PP80 73 aa12.19□□□□□ -0.46
PDE4C-208ENST00000595343 A8MWV9 139 aa12.19□□□□□ -0.46
PDE4C-208ENST00000595343 K7EQM0 130 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms