RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ZNF415Q09FC8 603 aa11□□□□□ -0.65
VRK3-207ENST00000594092 C14orf178Q8N769 122 aaPredicted RBP11□□□□□ -0.65
VRK3-207ENST00000594092 C11orf72Q8NBR9 251 aa11□□□□□ -0.65
VRK3-207ENST00000594092 GSN-AS1Q9NRJ2 163 aa11□□□□□ -0.65
VRK3-207ENST00000594092 KIR2DL5BA0A0G2JN68 375 aa10.99□□□□□ -0.65
VRK3-207ENST00000594092 KIR2DL5BA0A0G2JPC4 375 aa10.99□□□□□ -0.65
VRK3-207ENST00000594092 LINC00614P0C842 121 aa10.99□□□□□ -0.65
VRK3-207ENST00000594092 ZNF705AQ6ZN79 300 aaPredicted RBP10.99□□□□□ -0.65
VRK3-207ENST00000594092 KIR2DL5AQ8N109 375 aa10.99□□□□□ -0.65
VRK3-207ENST00000594092 KIR2DL5BQ8NHK3 375 aa10.99□□□□□ -0.65
VRK3-207ENST00000594092 PRSS3P2Q8NHM4 247 aa10.99□□□□□ -0.65
VRK3-207ENST00000594092 MRAP2Q96G30 205 aa10.99□□□□□ -0.65
VRK3-207ENST00000594092 URB1-AS1Q96HZ7 61 aa10.99□□□□□ -0.65
VRK3-207ENST00000594092 NPYP01303 97 aa10.98□□□□□ -0.65
VRK3-207ENST00000594092 CTAG1AP78358 180 aa10.98□□□□□ -0.65
VRK3-207ENST00000594092 PCP4L1A6NKN8 68 aa10.98□□□□□ -0.65
VRK3-207ENST00000594092 MGPP08493 103 aa10.98□□□□□ -0.65
VRK3-207ENST00000594092 APOC4P55056 127 aa10.98□□□□□ -0.65
VRK3-207ENST00000594092 FA2HQ7L5A8 372 aa10.98□□□□□ -0.65
VRK3-207ENST00000594092 RNASE8Q8TDE3 154 aaKnown RBP10.98□□□□□ -0.65
VRK3-207ENST00000594092 MAP1LC3AQ9H492 121 aa10.98□□□□□ -0.65
VRK3-207ENST00000594092 LOC389332A0A1B0GUA5 103 aa10.97□□□□□ -0.65
VRK3-207ENST00000594092 TNFRSF6BO95407 300 aa10.97□□□□□ -0.65
VRK3-207ENST00000594092 ZNF876PQ49A33 203 aa10.97□□□□□ -0.65
VRK3-207ENST00000594092 FAM19A2Q8N3H0 131 aa10.97□□□□□ -0.65
VRK3-207ENST00000594092 TRAV26-2A0A0B4J265 109 aa10.96□□□□□ -0.65
VRK3-207ENST00000594092 RIPPLY3P57055 190 aa10.96□□□□□ -0.65
VRK3-207ENST00000594092 TMEM263Q8WUH6 116 aaKnown RBP10.96□□□□□ -0.65
VRK3-207ENST00000594092 JPT2Q9H910 190 aa10.96□□□□□ -0.65
VRK3-207ENST00000594092 AP5S1Q9NUS5 200 aa10.96□□□□□ -0.65
VRK3-207ENST00000594092 M0R2P5 195 aa10.95□□□□□ -0.66
VRK3-207ENST00000594092 GAS8-AS1O95177 125 aa10.95□□□□□ -0.66
VRK3-207ENST00000594092 IFI27P40305 119 aaPredicted RBP10.95□□□□□ -0.66
VRK3-207ENST00000594092 PYY3Q5JQD4 70 aa10.95□□□□□ -0.66
VRK3-207ENST00000594092 IL17DQ8TAD2 202 aa10.95□□□□□ -0.66
VRK3-207ENST00000594092 SPXQ9BT56 116 aa10.95□□□□□ -0.66
VRK3-207ENST00000594092 KIF25-AS1Q9Y6Z4 181 aa10.95□□□□□ -0.66
VRK3-207ENST00000594092 GATA1P15976 413 aaPredicted RBP10.95□□□□□ -0.66
VRK3-207ENST00000594092 RRN3P1Q2M238 152 aa10.95□□□□□ -0.66
VRK3-207ENST00000594092 PTH2Q96A98 100 aa10.95□□□□□ -0.66
VRK3-207ENST00000594092 A8MZ25 164 aa10.94□□□□□ -0.66
VRK3-207ENST00000594092 Q6ZWC4 215 aa10.94□□□□□ -0.66
VRK3-207ENST00000594092 POM121L12Q8N7R1 296 aa10.94□□□□□ -0.66
VRK3-207ENST00000594092 NRACQ8N912 160 aa10.94□□□□□ -0.66
VRK3-207ENST00000594092 C16orf74Q96GX8 76 aa10.94□□□□□ -0.66
VRK3-207ENST00000594092 NOTCH1P46531 2555 aa10.94□□□□□ -0.66
VRK3-207ENST00000594092 A0A087WWL8 130 aa10.93□□□□□ -0.66
VRK3-207ENST00000594092 IGHV1-24A0A0C4DH33 117 aa10.93□□□□□ -0.66
VRK3-207ENST00000594092 JOSD1Q15040 202 aaPredicted RBP10.93□□□□□ -0.66
VRK3-207ENST00000594092 DEFB135Q30KP9 77 aa10.93□□□□□ -0.66
VRK3-207ENST00000594092 PIK3CD-AS1Q5SR53 167 aa10.93□□□□□ -0.66
VRK3-207ENST00000594092 PLAC8L1A1L4L8 177 aa10.93□□□□□ -0.66
VRK3-207ENST00000594092 PPP1R17O96001 155 aa10.93□□□□□ -0.66
VRK3-207ENST00000594092 LINC00315P59091 139 aa10.93□□□□□ -0.66
VRK3-207ENST00000594092 PMCHL1Q16048 86 aa10.93□□□□□ -0.66
VRK3-207ENST00000594092 FAM74A4Q5TZK3 123 aa10.93□□□□□ -0.66
VRK3-207ENST00000594092 NXT2Q9NPJ8 142 aaKnown RBP10.93□□□□□ -0.66
VRK3-207ENST00000594092 X6R8D5 127 aa10.93□□□□□ -0.66
VRK3-207ENST00000594092 MGAM2Q2M2H8 2515 aa10.93□□□□□ -0.66
VRK3-207ENST00000594092 F5H697 171 aa10.92□□□□□ -0.66
VRK3-207ENST00000594092 MRPL16Q9NX20 251 aaKnown RBP10.92□□□□□ -0.66
VRK3-207ENST00000594092 NBEAL1Q6ZS30 2694 aa10.92□□□□□ -0.66
VRK3-207ENST00000594092 PRSS47A8MTI9 375 aa10.91□□□□□ -0.66
VRK3-207ENST00000594092 CRYGDP07320 174 aa10.91□□□□□ -0.66
VRK3-207ENST00000594092 NBEAL2Q6ZNJ1 2754 aa10.91□□□□□ -0.66
VRK3-207ENST00000594092 A8MWV9 139 aa10.91□□□□□ -0.66
VRK3-207ENST00000594092 DAZ2Q13117 558 aaKnown RBP10.91□□□□□ -0.66
VRK3-207ENST00000594092 ZNF56Q15929 161 aa10.91□□□□□ -0.66
VRK3-207ENST00000594092 Q8N8P6 123 aa10.91□□□□□ -0.66
VRK3-207ENST00000594092 RASL10AQ92737 203 aa10.91□□□□□ -0.66
VRK3-207ENST00000594092 SMIM9A6NGZ8 99 aa10.9□□□□□ -0.66
VRK3-207ENST00000594092 KRTDAPP60985 99 aa10.9□□□□□ -0.66
VRK3-207ENST00000594092 KPRPQ5T749 579 aaPredicted RBP10.9□□□□□ -0.66
VRK3-207ENST00000594092 SUMO4Q6EEV6 95 aa10.9□□□□□ -0.66
VRK3-207ENST00000594092 C20orf78Q9BR46 151 aa10.9□□□□□ -0.66
VRK3-207ENST00000594092 NOP10Q9NPE3 64 aaKnown RBP10.9□□□□□ -0.66
VRK3-207ENST00000594092 NIT2Q9NQR4 276 aa10.9□□□□□ -0.66
VRK3-207ENST00000594092 TRGV1A0A0A0MS02 117 aa10.89□□□□□ -0.67
VRK3-207ENST00000594092 LINC01546A6NGU7 62 aa10.89□□□□□ -0.67
VRK3-207ENST00000594092 LEPROTL1O95214 131 aa10.89□□□□□ -0.67
VRK3-207ENST00000594092 SCGB1D1O95968 90 aa10.89□□□□□ -0.67
VRK3-207ENST00000594092 RPL39LQ96EH5 51 aaKnown RBP10.89□□□□□ -0.67
VRK3-207ENST00000594092 NDUFAF3Q9BU61 184 aa10.89□□□□□ -0.67
VRK3-207ENST00000594092 PRB2P02812 416 aaPredicted RBP10.88□□□□□ -0.67
VRK3-207ENST00000594092 SUMO2P61956 95 aaKnown RBP10.88□□□□□ -0.67
VRK3-207ENST00000594092 LGALS9BQ3B8N2 356 aa10.88□□□□□ -0.67
VRK3-207ENST00000594092 Q6ZTI0 123 aa10.88□□□□□ -0.67
VRK3-207ENST00000594092 RNF183Q96D59 192 aa10.88□□□□□ -0.67
VRK3-207ENST00000594092 OVOL2Q9BRP0 275 aa10.88□□□□□ -0.67
VRK3-207ENST00000594092 CFAP126Q5VTH2 177 aa10.88□□□□□ -0.67
VRK3-207ENST00000594092 OR11H2Q8NH07 326 aa10.88□□□□□ -0.67
VRK3-207ENST00000594092 SMIM2Q9BVW6 85 aa10.88□□□□□ -0.67
VRK3-207ENST00000594092 HSPB8Q9UJY1 196 aa10.88□□□□□ -0.67
VRK3-207ENST00000594092 IGLV2-18A0A075B6J9 118 aa10.87□□□□□ -0.67
VRK3-207ENST00000594092 RS1O15537 224 aa10.87□□□□□ -0.67
VRK3-207ENST00000594092 C3orf79P0CE67 100 aa10.87□□□□□ -0.67
VRK3-207ENST00000594092 UFSP1Q6NVU6 142 aa10.87□□□□□ -0.67
VRK3-207ENST00000594092 HBDP02042 147 aa10.86□□□□□ -0.67
VRK3-207ENST00000594092 EMP1P54849 157 aa10.86□□□□□ -0.67
VRK3-207ENST00000594092 CDPF1Q6NVV7 123 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms