RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 A0A1B0GV50 99 aa9.83□□□□□ -0.84
PNKP-202ENST00000593706 TRBV6-4A0A1B0GX49 114 aa9.83□□□□□ -0.84
PNKP-202ENST00000593706 SCO2A0A1W2PP80 73 aa9.83□□□□□ -0.84
PNKP-202ENST00000593706 B4DEV8 164 aa9.83□□□□□ -0.84
PNKP-202ENST00000593706 C1QBP02746 253 aa9.83□□□□□ -0.84
PNKP-202ENST00000593706 H2AFB1P0C5Y9 115 aa9.83□□□□□ -0.84
PNKP-202ENST00000593706 ASIPP42127 132 aa9.83□□□□□ -0.84
PNKP-202ENST00000593706 AKR1C3P42330 323 aa9.83□□□□□ -0.84
PNKP-202ENST00000593706 UBE2G1P62253 170 aa9.83□□□□□ -0.84
PNKP-202ENST00000593706 LINC01559Q495D7 138 aa9.83□□□□□ -0.84
PNKP-202ENST00000593706 MLST8Q9BVC4 326 aa9.83□□□□□ -0.84
PNKP-202ENST00000593706 PARLQ9H300 379 aa9.83□□□□□ -0.84
PNKP-202ENST00000593706 IGHV3-73A0A0B4J1V6 119 aa9.82□□□□□ -0.84
PNKP-202ENST00000593706 PLA2G1BP04054 148 aaKnown RBP9.82□□□□□ -0.84
PNKP-202ENST00000593706 LINC00694P0DN24 101 aa9.82□□□□□ -0.84
PNKP-202ENST00000593706 CCL20P78556 96 aa9.82□□□□□ -0.84
PNKP-202ENST00000593706 LAGE3Q14657 143 aa9.82□□□□□ -0.84
PNKP-202ENST00000593706 LELP1Q5T871 98 aa9.82□□□□□ -0.84
PNKP-202ENST00000593706 H3BVH4 76 aa9.81□□□□□ -0.84
PNKP-202ENST00000593706 M0R036 132 aa9.81□□□□□ -0.84
PNKP-202ENST00000593706 MGST1P10620 155 aaKnown RBP9.81□□□□□ -0.84
PNKP-202ENST00000593706 ZFP2Q6ZN57 461 aa9.81□□□□□ -0.84
PNKP-202ENST00000593706 AKAP14Q86UN6 197 aa9.81□□□□□ -0.84
PNKP-202ENST00000593706 C11orf52Q96A22 123 aa9.81□□□□□ -0.84
PNKP-202ENST00000593706 TM2D2Q9BX73 214 aa9.81□□□□□ -0.84
PNKP-202ENST00000593706 GTSF1LQ9H1H1 148 aa9.81□□□□□ -0.84
PNKP-202ENST00000593706 FAM30AQ9NZY2 134 aa9.81□□□□□ -0.84
PNKP-202ENST00000593706 A8MWV9 139 aa9.8□□□□□ -0.84
PNKP-202ENST00000593706 S100A9P06702 114 aaKnown RBP9.8□□□□□ -0.84
PNKP-202ENST00000593706 RAB5CP51148 216 aa9.8□□□□□ -0.84
PNKP-202ENST00000593706 DMRTA1Q5VZB9 504 aa9.8□□□□□ -0.84
PNKP-202ENST00000593706 ATP6V0E2Q8NHE4 81 aa9.8□□□□□ -0.84
PNKP-202ENST00000593706 SAMD10Q9BYL1 202 aa9.8□□□□□ -0.84
PNKP-202ENST00000593706 JPT2Q9H910 190 aa9.8□□□□□ -0.84
PNKP-202ENST00000593706 GRIFINA4D1Z8 144 aa9.79□□□□□ -0.84
PNKP-202ENST00000593706 LECT2O14960 151 aa9.79□□□□□ -0.84
PNKP-202ENST00000593706 ARMS2P0C7Q2 107 aa9.79□□□□□ -0.84
PNKP-202ENST00000593706 S100A4P26447 101 aaKnown RBP9.79□□□□□ -0.84
PNKP-202ENST00000593706 SULT1A2P50226 295 aa9.79□□□□□ -0.84
PNKP-202ENST00000593706 LINC00528Q8N1L1 170 aa9.79□□□□□ -0.84
PNKP-202ENST00000593706 C9orf62Q8N4C0 152 aa9.79□□□□□ -0.84
PNKP-202ENST00000593706 MANBALQ9NQG1 85 aa9.79□□□□□ -0.84
PNKP-202ENST00000593706 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.78□□□□□ -0.84
PNKP-202ENST00000593706 DERL1Q9BUN8 251 aa9.78□□□□□ -0.84
PNKP-202ENST00000593706 GNG13Q9P2W3 67 aa9.78□□□□□ -0.84
PNKP-202ENST00000593706 Q9UF83 564 aa9.78□□□□□ -0.84
PNKP-202ENST00000593706 TMSB15BA0A087X1C1 80 aa9.77□□□□□ -0.85
PNKP-202ENST00000593706 CXCL1P09341 107 aa9.77□□□□□ -0.85
PNKP-202ENST00000593706 RPL35P42766 123 aaKnown RBP9.77□□□□□ -0.85
PNKP-202ENST00000593706 WFDC2Q14508 124 aa9.77□□□□□ -0.85
PNKP-202ENST00000593706 EIF5AL1Q6IS14 154 aaKnown RBP9.77□□□□□ -0.85
PNKP-202ENST00000593706 SLC51BQ86UW2 128 aa9.77□□□□□ -0.85
PNKP-202ENST00000593706 Q8N3U1 123 aa9.77□□□□□ -0.85
PNKP-202ENST00000593706 TRAV8-3A0A0A6YYJ7 113 aa9.76□□□□□ -0.85
PNKP-202ENST00000593706 RPL19P84098 196 aaKnown RBP9.76□□□□□ -0.85
PNKP-202ENST00000593706 TOR2AQ5JU69 321 aa9.76□□□□□ -0.85
PNKP-202ENST00000593706 BAGE2Q86Y30 109 aa9.76□□□□□ -0.85
PNKP-202ENST00000593706 C14orf178Q8N769 122 aaPredicted RBP9.76□□□□□ -0.85
PNKP-202ENST00000593706 SFRP2Q96HF1 295 aa9.76□□□□□ -0.85
PNKP-202ENST00000593706 GAGE12JA6NER3 117 aa9.75□□□□□ -0.85
PNKP-202ENST00000593706 RHODO00212 210 aa9.75□□□□□ -0.85
PNKP-202ENST00000593706 IGLV2-8P01709 118 aa9.75□□□□□ -0.85
PNKP-202ENST00000593706 GAGE1Q13065 139 aa9.75□□□□□ -0.85
PNKP-202ENST00000593706 GAGE4Q13068 117 aa9.75□□□□□ -0.85
PNKP-202ENST00000593706 GAGE5Q13069 117 aa9.75□□□□□ -0.85
PNKP-202ENST00000593706 GAGE13Q4V321 117 aa9.75□□□□□ -0.85
PNKP-202ENST00000593706 Q6ZSA8 131 aa9.75□□□□□ -0.85
PNKP-202ENST00000593706 SYT8Q8NBV8 401 aa9.75□□□□□ -0.85
PNKP-202ENST00000593706 DEFB104AQ8WTQ1 72 aa9.75□□□□□ -0.85
PNKP-202ENST00000593706 SSBP4Q9BWG4 385 aaPredicted RBP9.75□□□□□ -0.85
PNKP-202ENST00000593706 LRP1Q07954 4544 aaKnown RBP9.75□□□□□ -0.85
PNKP-202ENST00000593706 SNAI2O43623 268 aa9.74□□□□□ -0.85
PNKP-202ENST00000593706 DAZ4Q86SG3 579 aaKnown RBP9.74□□□□□ -0.85
PNKP-202ENST00000593706 ZFP82Q8N141 532 aa9.74□□□□□ -0.85
PNKP-202ENST00000593706 DAZ3Q9NR90 486 aaKnown RBP9.74□□□□□ -0.85
PNKP-202ENST00000593706 PHLDA3Q9Y5J5 127 aa9.74□□□□□ -0.85
PNKP-202ENST00000593706 URGCP-MRPS24S4R325 110 aa9.74□□□□□ -0.85
PNKP-202ENST00000593706 TRBV20OR9-2A0A075B6H5 130 aa9.73□□□□□ -0.85
PNKP-202ENST00000593706 M0R381 172 aa9.73□□□□□ -0.85
PNKP-202ENST00000593706 NKX2-5P52952 324 aaPredicted RBP9.73□□□□□ -0.85
PNKP-202ENST00000593706 MEF2BQ02080 365 aaPredicted RBP9.73□□□□□ -0.85
PNKP-202ENST00000593706 LINC01620Q4KN68 170 aa9.73□□□□□ -0.85
PNKP-202ENST00000593706 CENPWQ5EE01 88 aa9.73□□□□□ -0.85
PNKP-202ENST00000593706 OR10AG1Q8NH19 301 aa9.73□□□□□ -0.85
PNKP-202ENST00000593706 A0A087WWL8 130 aa9.72□□□□□ -0.85
PNKP-202ENST00000593706 KRTAP29-1A8MX34 341 aaPredicted RBP9.72□□□□□ -0.85
PNKP-202ENST00000593706 OR5AL1P0C617 328 aa9.72□□□□□ -0.85
PNKP-202ENST00000593706 BCL2P10415 239 aa9.72□□□□□ -0.85
PNKP-202ENST00000593706 SCXQ7RTU7 201 aa9.72□□□□□ -0.85
PNKP-202ENST00000593706 BAALCQ8WXS3 180 aa9.72□□□□□ -0.85
PNKP-202ENST00000593706 RMI2Q96E14 147 aa9.72□□□□□ -0.85
PNKP-202ENST00000593706 COX11Q9Y6N1 276 aa9.72□□□□□ -0.85
PNKP-202ENST00000593706 A0A087WWC5 75 aa9.71□□□□□ -0.86
PNKP-202ENST00000593706 C19orf71A6NCJ1 209 aa9.71□□□□□ -0.86
PNKP-202ENST00000593706 RBFOX3A6NFN3 312 aa9.71□□□□□ -0.86
PNKP-202ENST00000593706 TEX46H3BTG2 121 aa9.71□□□□□ -0.86
PNKP-202ENST00000593706 PDE6DO43924 150 aa9.71□□□□□ -0.86
PNKP-202ENST00000593706 FAM74A4Q5TZK3 123 aa9.71□□□□□ -0.86
PNKP-202ENST00000593706 PRR27Q6MZM9 219 aa9.71□□□□□ -0.86
PNKP-202ENST00000593706 SMIM12Q96EX1 92 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms