RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 A0A1B0GXF2 115 aa9.83□□□□□ -0.84
DNMT1-228ENST00000592705 ZNRF2Q8NHG8 242 aa9.83□□□□□ -0.84
DNMT1-228ENST00000592705 ZNF48Q96MX3 618 aaPredicted RBP9.83□□□□□ -0.84
DNMT1-228ENST00000592705 HIGD1BQ9P298 99 aa9.83□□□□□ -0.84
DNMT1-228ENST00000592705 ATP5G1P05496 136 aa9.83□□□□□ -0.84
DNMT1-228ENST00000592705 TNFRSF13BO14836 293 aaPredicted RBP9.83□□□□□ -0.84
DNMT1-228ENST00000592705 C16orf54Q6UWD8 224 aa9.83□□□□□ -0.84
DNMT1-228ENST00000592705 Q8N9W7 124 aa9.83□□□□□ -0.84
DNMT1-228ENST00000592705 IGLL5B9A064 214 aa9.82□□□□□ -0.84
DNMT1-228ENST00000592705 HERVK_113P63121 156 aa9.82□□□□□ -0.84
DNMT1-228ENST00000592705 TLN1Q9Y490 2541 aaKnown RBP9.82□□□□□ -0.84
DNMT1-228ENST00000592705 TMEM89A2RUT3 159 aa9.82□□□□□ -0.84
DNMT1-228ENST00000592705 TAX1BP3O14907 124 aa9.82□□□□□ -0.84
DNMT1-228ENST00000592705 HIST1H4AP62805 103 aaKnown RBP9.82□□□□□ -0.84
DNMT1-228ENST00000592705 TMEM243Q9BU79 118 aa9.82□□□□□ -0.84
DNMT1-228ENST00000592705 ADAMTS9Q9P2N4 1935 aa9.82□□□□□ -0.84
DNMT1-228ENST00000592705 TRAV12-1A0A0B4J245 112 aa9.82□□□□□ -0.84
DNMT1-228ENST00000592705 IGHV3-38A0A0C4DH36 116 aa9.82□□□□□ -0.84
DNMT1-228ENST00000592705 CDK2AP2O75956 126 aa9.82□□□□□ -0.84
DNMT1-228ENST00000592705 C9orf47Q6ZRZ4 202 aa9.82□□□□□ -0.84
DNMT1-228ENST00000592705 LAMTOR3Q9UHA4 124 aa9.82□□□□□ -0.84
DNMT1-228ENST00000592705 C2orf70A6NJV1 201 aa9.81□□□□□ -0.84
DNMT1-228ENST00000592705 RNF183Q96D59 192 aa9.81□□□□□ -0.84
DNMT1-228ENST00000592705 NUP210LQ5VU65 1888 aa9.81□□□□□ -0.84
DNMT1-228ENST00000592705 RPL39LQ96EH5 51 aaKnown RBP9.81□□□□□ -0.84
DNMT1-228ENST00000592705 PIEZO2Q9H5I5 2752 aa9.81□□□□□ -0.84
DNMT1-228ENST00000592705 SPANXDQ9BXN6 97 aa9.81□□□□□ -0.84
DNMT1-228ENST00000592705 TRAV25A0A0B4J276 109 aa9.8□□□□□ -0.84
DNMT1-228ENST00000592705 F8WEM9 126 aa9.8□□□□□ -0.84
DNMT1-228ENST00000592705 CFC1BP0CG36 223 aa9.8□□□□□ -0.84
DNMT1-228ENST00000592705 CFC1P0CG37 223 aa9.8□□□□□ -0.84
DNMT1-228ENST00000592705 Q8N7P7 452 aa9.8□□□□□ -0.84
DNMT1-228ENST00000592705 IGKV2D-24A0A075B6R9 120 aa9.8□□□□□ -0.84
DNMT1-228ENST00000592705 PRAC2D3DTV9 90 aa9.8□□□□□ -0.84
DNMT1-228ENST00000592705 WISP2O76076 250 aa9.8□□□□□ -0.84
DNMT1-228ENST00000592705 SUMO4Q6EEV6 95 aa9.8□□□□□ -0.84
DNMT1-228ENST00000592705 A0A0J9YY99 117 aa9.8□□□□□ -0.84
DNMT1-228ENST00000592705 VWC2LB2RUY7 222 aa9.8□□□□□ -0.84
DNMT1-228ENST00000592705 SORL1Q92673 2214 aa9.8□□□□□ -0.84
DNMT1-228ENST00000592705 SPATA12Q7Z6I5 190 aa9.79□□□□□ -0.84
DNMT1-228ENST00000592705 UTF1Q5T230 341 aa9.79□□□□□ -0.84
DNMT1-228ENST00000592705 FREM1Q5H8C1 2179 aa9.79□□□□□ -0.84
DNMT1-228ENST00000592705 F8W735 103 aaPredicted RBP9.79□□□□□ -0.84
DNMT1-228ENST00000592705 LMO4P61968 165 aa9.79□□□□□ -0.84
DNMT1-228ENST00000592705 SH2D6Q7Z4S9 175 aa9.79□□□□□ -0.84
DNMT1-228ENST00000592705 C4orf3Q8WVX3 66 aa9.79□□□□□ -0.84
DNMT1-228ENST00000592705 MED14OSP0DP75 135 aa9.79□□□□□ -0.84
DNMT1-228ENST00000592705 MRPL23Q16540 153 aaKnown RBP9.79□□□□□ -0.84
DNMT1-228ENST00000592705 ZFP2Q6ZN57 461 aa9.79□□□□□ -0.84
DNMT1-228ENST00000592705 C5orf56Q8N8D9 126 aa9.79□□□□□ -0.84
DNMT1-228ENST00000592705 PCDH15Q96QU1 1955 aa9.79□□□□□ -0.84
DNMT1-228ENST00000592705 TNRC6AQ8NDV7 1962 aaKnown RBP9.79□□□□□ -0.84
DNMT1-228ENST00000592705 C10orf142B7Z368 130 aa9.79□□□□□ -0.84
DNMT1-228ENST00000592705 Q9HAA7 133 aa9.79□□□□□ -0.84
DNMT1-228ENST00000592705 PCNX3Q9H6A9 2034 aa9.78□□□□□ -0.84
DNMT1-228ENST00000592705 CARD19Q96LW7 228 aa9.78□□□□□ -0.84
DNMT1-228ENST00000592705 C1orf229Q6ZS94 237 aaPredicted RBP9.78□□□□□ -0.84
DNMT1-228ENST00000592705 PRRC2AP48634 2157 aaKnown RBP9.78□□□□□ -0.84
DNMT1-228ENST00000592705 SOCS3O14543 225 aa9.78□□□□□ -0.84
DNMT1-228ENST00000592705 SPRY2O43597 315 aa9.78□□□□□ -0.84
DNMT1-228ENST00000592705 SPATA25Q9BR10 227 aa9.78□□□□□ -0.84
DNMT1-228ENST00000592705 A0A096LPF7 62 aa9.78□□□□□ -0.84
DNMT1-228ENST00000592705 TRAV13-2A0A0B4J235 113 aa9.78□□□□□ -0.84
DNMT1-228ENST00000592705 RNASE8Q8TDE3 154 aaKnown RBP9.78□□□□□ -0.84
DNMT1-228ENST00000592705 TOMM6Q96B49 74 aa9.78□□□□□ -0.84
DNMT1-228ENST00000592705 MLST8Q9BVC4 326 aa9.78□□□□□ -0.84
DNMT1-228ENST00000592705 C1orf43Q9BWL3 253 aa9.78□□□□□ -0.84
DNMT1-228ENST00000592705 PRSS47A8MTI9 375 aa9.77□□□□□ -0.84
DNMT1-228ENST00000592705 FXYD2P54710 66 aa9.77□□□□□ -0.84
DNMT1-228ENST00000592705 MBD6Q96DN6 1003 aa9.77□□□□□ -0.84
DNMT1-228ENST00000592705 AJUBAQ96IF1 538 aa9.77□□□□□ -0.84
DNMT1-228ENST00000592705 FANCD2OSQ96PS1 177 aa9.77□□□□□ -0.84
DNMT1-228ENST00000592705 ICOSQ9Y6W8 199 aa9.77□□□□□ -0.84
DNMT1-228ENST00000592705 C15orf53Q8NAA6 179 aa9.77□□□□□ -0.85
DNMT1-228ENST00000592705 ANGP03950 147 aaKnown RBP9.77□□□□□ -0.85
DNMT1-228ENST00000592705 DEFB135Q30KP9 77 aa9.77□□□□□ -0.85
DNMT1-228ENST00000592705 GDF5OSQ5U4N7 250 aa9.77□□□□□ -0.85
DNMT1-228ENST00000592705 SIRPDQ9H106 197 aa9.77□□□□□ -0.85
DNMT1-228ENST00000592705 NOP10Q9NPE3 64 aaKnown RBP9.77□□□□□ -0.85
DNMT1-228ENST00000592705 IGHV4OR15-8A0A075B7B6 117 aa9.77□□□□□ -0.85
DNMT1-228ENST00000592705 A0A087WW49 117 aa9.77□□□□□ -0.85
DNMT1-228ENST00000592705 TM2D2Q9BX73 214 aa9.77□□□□□ -0.85
DNMT1-228ENST00000592705 EDA2RQ9HAV5 297 aa9.77□□□□□ -0.85
DNMT1-228ENST00000592705 ODF1Q14990 250 aa9.76□□□□□ -0.85
DNMT1-228ENST00000592705 LINC00322Q6ZN03 302 aaPredicted RBP9.76□□□□□ -0.85
DNMT1-228ENST00000592705 IFITM1P13164 125 aa9.76□□□□□ -0.85
DNMT1-228ENST00000592705 RNASE13Q5GAN3 156 aaKnown RBP9.76□□□□□ -0.85
DNMT1-228ENST00000592705 MYO9AB2RTY4 2548 aa9.76□□□□□ -0.85
DNMT1-228ENST00000592705 PFN2P35080 140 aa9.76□□□□□ -0.85
DNMT1-228ENST00000592705 IGHG2P01859 326 aa9.76□□□□□ -0.85
DNMT1-228ENST00000592705 GAGE6Q13070 117 aa9.76□□□□□ -0.85
DNMT1-228ENST00000592705 Q6YL49 198 aa9.76□□□□□ -0.85
DNMT1-228ENST00000592705 APRG1Q8IVJ8 170 aa9.76□□□□□ -0.85
DNMT1-228ENST00000592705 NKAPP1Q8N9T2 125 aa9.76□□□□□ -0.85
DNMT1-228ENST00000592705 NTN5Q8WTR8 489 aaPredicted RBP9.75□□□□□ -0.85
DNMT1-228ENST00000592705 SPTBN4Q9H254 2564 aa9.75□□□□□ -0.85
DNMT1-228ENST00000592705 HILS1P60008 231 aa9.75□□□□□ -0.85
DNMT1-228ENST00000592705 RNF152Q8N8N0 203 aa9.75□□□□□ -0.85
DNMT1-228ENST00000592705 E9PLD3 99 aa9.74□□□□□ -0.85
DNMT1-228ENST00000592705 K7EMT4 169 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms