RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 H3BVH4 76 aa12.5□□□□□ -0.41
CCDC43-205ENST00000592333 ZNF674Q2M3X9 581 aa12.5□□□□□ -0.41
CCDC43-205ENST00000592333 LINC01559Q495D7 138 aa12.5□□□□□ -0.41
CCDC43-205ENST00000592333 Q6ZSA8 131 aa12.5□□□□□ -0.41
CCDC43-205ENST00000592333 STOML3Q8TAV4 291 aa12.5□□□□□ -0.41
CCDC43-205ENST00000592333 SAMD10Q9BYL1 202 aa12.5□□□□□ -0.41
CCDC43-205ENST00000592333 PHLDA3Q9Y5J5 127 aa12.5□□□□□ -0.41
CCDC43-205ENST00000592333 URGCP-MRPS24S4R325 110 aa12.5□□□□□ -0.41
CCDC43-205ENST00000592333 SH2D1AO60880 128 aa12.49□□□□□ -0.41
CCDC43-205ENST00000592333 TPT1P13693 172 aaKnown RBP12.49□□□□□ -0.41
CCDC43-205ENST00000592333 C14orf178Q8N769 122 aaPredicted RBP12.49□□□□□ -0.41
CCDC43-205ENST00000592333 JPT2Q9H910 190 aa12.49□□□□□ -0.41
CCDC43-205ENST00000592333 MAP1LC3B2A6NCE7 125 aa12.48□□□□□ -0.41
CCDC43-205ENST00000592333 LTAP01374 205 aa12.48□□□□□ -0.41
CCDC43-205ENST00000592333 ELOBQ15370 118 aa12.48□□□□□ -0.41
CCDC43-205ENST00000592333 DAZ4Q86SG3 579 aaKnown RBP12.48□□□□□ -0.41
CCDC43-205ENST00000592333 NIT1Q86X76 327 aa12.48□□□□□ -0.41
CCDC43-205ENST00000592333 ZFP82Q8N141 532 aa12.48□□□□□ -0.41
CCDC43-205ENST00000592333 MAP1LC3BQ9GZQ8 125 aa12.48□□□□□ -0.41
CCDC43-205ENST00000592333 DAZ3Q9NR90 486 aaKnown RBP12.48□□□□□ -0.41
CCDC43-205ENST00000592333 S100A9P06702 114 aaKnown RBP12.47□□□□□ -0.41
CCDC43-205ENST00000592333 Q8N976 141 aa12.47□□□□□ -0.41
CCDC43-205ENST00000592333 FAM30AQ9NZY2 134 aa12.47□□□□□ -0.41
CCDC43-205ENST00000592333 M0R036 132 aa12.46□□□□□ -0.41
CCDC43-205ENST00000592333 PLA2G1BP04054 148 aaKnown RBP12.46□□□□□ -0.41
CCDC43-205ENST00000592333 Q9UF83 564 aa12.46□□□□□ -0.41
CCDC43-205ENST00000592333 MYCBP2O75592 4640 aa12.46□□□□□ -0.42
CCDC43-205ENST00000592333 CXCL1P09341 107 aa12.45□□□□□ -0.42
CCDC43-205ENST00000592333 RPL36AP83881 106 aaKnown RBP12.45□□□□□ -0.42
CCDC43-205ENST00000592333 FAM74A4Q5TZK3 123 aa12.45□□□□□ -0.42
CCDC43-205ENST00000592333 Q8N3U1 123 aa12.45□□□□□ -0.42
CCDC43-205ENST00000592333 RPL36ALQ969Q0 106 aaKnown RBP12.45□□□□□ -0.42
CCDC43-205ENST00000592333 CYTL1Q9NRR1 136 aa12.45□□□□□ -0.42
CCDC43-205ENST00000592333 TRBV7-3A0A075B6L6 115 aa12.44□□□□□ -0.42
CCDC43-205ENST00000592333 GRIFINA4D1Z8 144 aa12.44□□□□□ -0.42
CCDC43-205ENST00000592333 G3V3Q6 166 aa12.44□□□□□ -0.42
CCDC43-205ENST00000592333 Q0VG73 95 aa12.44□□□□□ -0.42
CCDC43-205ENST00000592333 WFDC2Q14508 124 aa12.44□□□□□ -0.42
CCDC43-205ENST00000592333 KCNIP4Q6PIL6 250 aa12.44□□□□□ -0.42
CCDC43-205ENST00000592333 ATRAIDQ6UW56 229 aa12.44□□□□□ -0.42
CCDC43-205ENST00000592333 OR10G8Q8NGN5 311 aa12.44□□□□□ -0.42
CCDC43-205ENST00000592333 A0A087WX48 190 aa12.43□□□□□ -0.42
CCDC43-205ENST00000592333 UMAD1C9J7I0 102 aa12.43□□□□□ -0.42
CCDC43-205ENST00000592333 ARPC5O15511 151 aa12.43□□□□□ -0.42
CCDC43-205ENST00000592333 AKR1C3P42330 323 aa12.43□□□□□ -0.42
CCDC43-205ENST00000592333 UBE2D3P61077 147 aa12.43□□□□□ -0.42
CCDC43-205ENST00000592333 UBE2D2P62837 147 aa12.43□□□□□ -0.42
CCDC43-205ENST00000592333 CST9LP1Q5W188 147 aa12.43□□□□□ -0.42
CCDC43-205ENST00000592333 FLG2Q5D862 2391 aaPredicted RBP12.42□□□□□ -0.42
CCDC43-205ENST00000592333 A0A087WWL8 130 aa12.42□□□□□ -0.42
CCDC43-205ENST00000592333 M0R381 172 aa12.42□□□□□ -0.42
CCDC43-205ENST00000592333 RAB4BP61018 213 aa12.42□□□□□ -0.42
CCDC43-205ENST00000592333 HAMPP81172 84 aa12.42□□□□□ -0.42
CCDC43-205ENST00000592333 ZNF345Q14585 488 aa12.42□□□□□ -0.42
CCDC43-205ENST00000592333 PKIAP61925 76 aa12.41□□□□□ -0.42
CCDC43-205ENST00000592333 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.41□□□□□ -0.42
CCDC43-205ENST00000592333 MBD3L1Q8WWY6 194 aa12.41□□□□□ -0.42
CCDC43-205ENST00000592333 BAALCQ8WXS3 180 aa12.41□□□□□ -0.42
CCDC43-205ENST00000592333 KLK12Q9UKR0 248 aa12.41□□□□□ -0.42
CCDC43-205ENST00000592333 IGKV2D-24A0A075B6R9 120 aa12.4□□□□□ -0.42
CCDC43-205ENST00000592333 RGS21Q2M5E4 152 aa12.4□□□□□ -0.42
CCDC43-205ENST00000592333 DNAH8Q96JB1 4490 aa12.4□□□□□ -0.42
CCDC43-205ENST00000592333 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.39□□□□□ -0.43
CCDC43-205ENST00000592333 TMSB15BA0A087X1C1 80 aa12.39□□□□□ -0.43
CCDC43-205ENST00000592333 LECT2O14960 151 aa12.39□□□□□ -0.43
CCDC43-205ENST00000592333 PAGE4O60829 102 aa12.39□□□□□ -0.43
CCDC43-205ENST00000592333 C14orf177Q52M58 125 aa12.39□□□□□ -0.43
CCDC43-205ENST00000592333 PRR27Q6MZM9 219 aa12.39□□□□□ -0.43
CCDC43-205ENST00000592333 KCNRGQ8N5I3 272 aa12.39□□□□□ -0.43
CCDC43-205ENST00000592333 MLST8Q9BVC4 326 aa12.39□□□□□ -0.43
CCDC43-205ENST00000592333 SSBP4Q9BWG4 385 aaPredicted RBP12.39□□□□□ -0.43
CCDC43-205ENST00000592333 TRBV6-8A0A0A6YYG3 113 aa12.38□□□□□ -0.43
CCDC43-205ENST00000592333 RBFOX3A6NFN3 312 aa12.38□□□□□ -0.43
CCDC43-205ENST00000592333 SNAI2O43623 268 aa12.38□□□□□ -0.43
CCDC43-205ENST00000592333 TMEM97Q5BJF2 176 aa12.38□□□□□ -0.43
CCDC43-205ENST00000592333 DEFB104AQ8WTQ1 72 aa12.38□□□□□ -0.43
CCDC43-205ENST00000592333 UBE2WQ96B02 151 aa12.38□□□□□ -0.43
CCDC43-205ENST00000592333 ZNF471Q9BX82 626 aaPredicted RBP12.38□□□□□ -0.43
CCDC43-205ENST00000592333 PFDN1O60925 122 aa12.37□□□□□ -0.43
CCDC43-205ENST00000592333 OR5AL1P0C617 328 aa12.37□□□□□ -0.43
CCDC43-205ENST00000592333 LINC00528Q8N1L1 170 aa12.37□□□□□ -0.43
CCDC43-205ENST00000592333 SFT2D1Q8WV19 159 aa12.37□□□□□ -0.43
CCDC43-205ENST00000592333 HMSDA8MTL9 139 aa12.36□□□□□ -0.43
CCDC43-205ENST00000592333 BAGE2Q86Y30 109 aa12.36□□□□□ -0.43
CCDC43-205ENST00000592333 C1orf43Q9BWL3 253 aa12.36□□□□□ -0.43
CCDC43-205ENST00000592333 A0A0D9SG52 128 aa12.35□□□□□ -0.43
CCDC43-205ENST00000592333 EIF5AP63241 154 aaKnown RBP12.35□□□□□ -0.43
CCDC43-205ENST00000592333 NEXN-AS1Q8NBZ9 246 aa12.35□□□□□ -0.43
CCDC43-205ENST00000592333 CHAC1Q9BUX1 264 aa12.35□□□□□ -0.43
CCDC43-205ENST00000592333 KRTAP29-1A8MX34 341 aaPredicted RBP12.34□□□□□ -0.43
CCDC43-205ENST00000592333 TMEM262E9PQX1 116 aa12.34□□□□□ -0.43
CCDC43-205ENST00000592333 J3QL48 77 aa12.34□□□□□ -0.43
CCDC43-205ENST00000592333 ZNF56Q15929 161 aa12.34□□□□□ -0.43
CCDC43-205ENST00000592333 OR10AG1Q8NH19 301 aa12.34□□□□□ -0.43
CCDC43-205ENST00000592333 CRPP02741 224 aa12.33□□□□□ -0.44
CCDC43-205ENST00000592333 SPANXN1Q5VSR9 72 aa12.33□□□□□ -0.44
CCDC43-205ENST00000592333 SCXQ7RTU7 201 aa12.33□□□□□ -0.44
CCDC43-205ENST00000592333 FAM213BQ8TBF2 198 aa12.33□□□□□ -0.44
CCDC43-205ENST00000592333 VAX2Q9UIW0 290 aa12.33□□□□□ -0.44
CCDC43-205ENST00000592333 SCO2A0A1W2PP80 73 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms