RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 C12orf54Q6X4T0 127 aa11.64□□□□□ -0.55
MBD1-227ENST00000592060 TMEM61Q8N0U2 210 aa11.64□□□□□ -0.55
MBD1-227ENST00000592060 MYO9AB2RTY4 2548 aa11.63□□□□□ -0.55
MBD1-227ENST00000592060 DPM2O94777 84 aa11.63□□□□□ -0.55
MBD1-227ENST00000592060 HLA-DRB4P13762 266 aa11.63□□□□□ -0.55
MBD1-227ENST00000592060 TCTAP57738 103 aa11.63□□□□□ -0.55
MBD1-227ENST00000592060 DEFB131AP59861 70 aa11.63□□□□□ -0.55
MBD1-227ENST00000592060 HIST2H2BDQ6DRA6 164 aa11.63□□□□□ -0.55
MBD1-227ENST00000592060 HLA-DRB4X5D2U9 266 aa11.63□□□□□ -0.55
MBD1-227ENST00000592060 A0A087WWL8 130 aa11.63□□□□□ -0.55
MBD1-227ENST00000592060 RBMY1A1P0DJD3 496 aaKnown RBP11.63□□□□□ -0.55
MBD1-227ENST00000592060 RBMY1CP0DJD4 496 aa11.63□□□□□ -0.55
MBD1-227ENST00000592060 RBMY1FQ15415 496 aaKnown RBP11.63□□□□□ -0.55
MBD1-227ENST00000592060 CSTL1Q9H114 145 aa11.63□□□□□ -0.55
MBD1-227ENST00000592060 A0A087WX48 190 aa11.62□□□□□ -0.55
MBD1-227ENST00000592060 RBMY1BA6NDE4 496 aaKnown RBP11.62□□□□□ -0.55
MBD1-227ENST00000592060 RBMY1EA6NEQ0 496 aaKnown RBP11.62□□□□□ -0.55
MBD1-227ENST00000592060 RBMY1DP0C7P1 496 aaKnown RBP11.62□□□□□ -0.55
MBD1-227ENST00000592060 MRPL35Q9NZE8 188 aaKnown RBP11.62□□□□□ -0.55
MBD1-227ENST00000592060 TRAV12-1A0A0B4J245 112 aa11.61□□□□□ -0.55
MBD1-227ENST00000592060 H3BMM0 161 aa11.61□□□□□ -0.55
MBD1-227ENST00000592060 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.61□□□□□ -0.55
MBD1-227ENST00000592060 Q6ZVH6 145 aa11.61□□□□□ -0.55
MBD1-227ENST00000592060 PCP2Q8IVA1 136 aa11.61□□□□□ -0.55
MBD1-227ENST00000592060 SYT8Q8NBV8 401 aa11.61□□□□□ -0.55
MBD1-227ENST00000592060 ORAOV1Q8WV07 137 aa11.61□□□□□ -0.55
MBD1-227ENST00000592060 COX11Q9Y6N1 276 aa11.61□□□□□ -0.55
MBD1-227ENST00000592060 IGKV2D-26A0A0A0MRZ7 120 aa11.61□□□□□ -0.55
MBD1-227ENST00000592060 NMUP48645 174 aa11.61□□□□□ -0.55
MBD1-227ENST00000592060 POLR2KP53803 58 aaKnown RBP11.61□□□□□ -0.55
MBD1-227ENST00000592060 DEFB114Q30KQ6 69 aa11.61□□□□□ -0.55
MBD1-227ENST00000592060 TRGV11A0A075B6L2 103 aa11.6□□□□□ -0.55
MBD1-227ENST00000592060 SIVA1O15304 175 aa11.6□□□□□ -0.55
MBD1-227ENST00000592060 CRYGDP07320 174 aa11.6□□□□□ -0.55
MBD1-227ENST00000592060 ZNF124Q15973 351 aa11.6□□□□□ -0.55
MBD1-227ENST00000592060 C2orf66Q6UXQ4 117 aa11.6□□□□□ -0.55
MBD1-227ENST00000592060 DYNLRB2Q8TF09 96 aa11.6□□□□□ -0.55
MBD1-227ENST00000592060 SCGB3A1Q96QR1 104 aa11.6□□□□□ -0.55
MBD1-227ENST00000592060 MAP6D1Q9H9H5 199 aa11.6□□□□□ -0.55
MBD1-227ENST00000592060 AKAP9Q99996 3911 aa11.6□□□□□ -0.55
MBD1-227ENST00000592060 TRBV6-5A0A0K0K1A5 114 aa11.59□□□□□ -0.55
MBD1-227ENST00000592060 NPSP0C0P6 89 aa11.59□□□□□ -0.55
MBD1-227ENST00000592060 NEGR1Q7Z3B1 354 aa11.59□□□□□ -0.55
MBD1-227ENST00000592060 RAX2Q96IS3 184 aa11.59□□□□□ -0.55
MBD1-227ENST00000592060 FHL3Q13643 280 aa11.59□□□□□ -0.55
MBD1-227ENST00000592060 PDZD2O15018 2839 aa11.58□□□□□ -0.55
MBD1-227ENST00000592060 TAX1BP3O14907 124 aa11.58□□□□□ -0.56
MBD1-227ENST00000592060 TMEM97Q5BJF2 176 aa11.58□□□□□ -0.56
MBD1-227ENST00000592060 ZC2HC1BQ5TFG8 222 aa11.58□□□□□ -0.56
MBD1-227ENST00000592060 MORN3Q6PF18 240 aaPredicted RBP11.58□□□□□ -0.56
MBD1-227ENST00000592060 NEXN-AS1Q8NBZ9 246 aa11.58□□□□□ -0.56
MBD1-227ENST00000592060 TMEM160Q9NX00 188 aa11.58□□□□□ -0.56
MBD1-227ENST00000592060 ZNF256Q9Y2P7 627 aaPredicted RBP11.58□□□□□ -0.56
MBD1-227ENST00000592060 SORL1Q92673 2214 aa11.58□□□□□ -0.56
MBD1-227ENST00000592060 F5H697 171 aa11.58□□□□□ -0.56
MBD1-227ENST00000592060 FAM74A4Q5TZK3 123 aa11.58□□□□□ -0.56
MBD1-227ENST00000592060 GTSCR1Q86UQ5 136 aa11.58□□□□□ -0.56
MBD1-227ENST00000592060 CBY3A6NI87 242 aa11.57□□□□□ -0.56
MBD1-227ENST00000592060 F8VRH5 84 aa11.57□□□□□ -0.56
MBD1-227ENST00000592060 H7C1H1 209 aa11.57□□□□□ -0.56
MBD1-227ENST00000592060 M0QY20 66 aa11.57□□□□□ -0.56
MBD1-227ENST00000592060 PLNP26678 52 aa11.57□□□□□ -0.56
MBD1-227ENST00000592060 CD300EQ496F6 205 aaPredicted RBP11.57□□□□□ -0.56
MBD1-227ENST00000592060 BAALCQ8WXS3 180 aa11.57□□□□□ -0.56
MBD1-227ENST00000592060 YAE1D1Q9NRH1 226 aa11.57□□□□□ -0.56
MBD1-227ENST00000592060 CD28P10747 220 aa11.56□□□□□ -0.56
MBD1-227ENST00000592060 ZFP2Q6ZN57 461 aa11.56□□□□□ -0.56
MBD1-227ENST00000592060 ERASQ7Z444 233 aa11.56□□□□□ -0.56
MBD1-227ENST00000592060 SPAG8Q99932 426 aaPredicted RBP11.56□□□□□ -0.56
MBD1-227ENST00000592060 TRBV27A0A0K0K1C4 114 aa11.56□□□□□ -0.56
MBD1-227ENST00000592060 SDHAF1A6NFY7 115 aa11.56□□□□□ -0.56
MBD1-227ENST00000592060 VCYO14598 125 aa11.56□□□□□ -0.56
MBD1-227ENST00000592060 HSD52Q0P140 79 aa11.56□□□□□ -0.56
MBD1-227ENST00000592060 ZNF56Q15929 161 aa11.56□□□□□ -0.56
MBD1-227ENST00000592060 TLN2Q9Y4G6 2542 aa11.55□□□□□ -0.56
MBD1-227ENST00000592060 RNASE1P07998 156 aaKnown RBP11.55□□□□□ -0.56
MBD1-227ENST00000592060 ZNF876PQ49A33 203 aa11.55□□□□□ -0.56
MBD1-227ENST00000592060 TTTY13Q9BZ97 58 aa11.55□□□□□ -0.56
MBD1-227ENST00000592060 C16orf95Q9H693 158 aa11.55□□□□□ -0.56
MBD1-227ENST00000592060 CYSLTR1Q9Y271 337 aa11.55□□□□□ -0.56
MBD1-227ENST00000592060 CHTOPQ9Y3Y2 248 aaKnown RBP11.55□□□□□ -0.56
MBD1-227ENST00000592060 FLNAP21333 2647 aaKnown RBP11.55□□□□□ -0.56
MBD1-227ENST00000592060 RIPPLY3P57055 190 aa11.54□□□□□ -0.56
MBD1-227ENST00000592060 SEC11AP67812 179 aa11.54□□□□□ -0.56
MBD1-227ENST00000592060 C11orf44Q8N8P7 122 aa11.54□□□□□ -0.56
MBD1-227ENST00000592060 JMJD8Q96S16 334 aa11.54□□□□□ -0.56
MBD1-227ENST00000592060 TRAV25A0A0B4J276 109 aa11.54□□□□□ -0.56
MBD1-227ENST00000592060 A0A1W2PRX2 142 aa11.54□□□□□ -0.56
MBD1-227ENST00000592060 HIGD1BQ9P298 99 aa11.54□□□□□ -0.56
MBD1-227ENST00000592060 TP53TG1Q9Y2A0 90 aa11.54□□□□□ -0.56
MBD1-227ENST00000592060 ITPR2Q14571 2701 aa11.54□□□□□ -0.56
MBD1-227ENST00000592060 ANK3Q12955 4377 aaKnown RBP11.53□□□□□ -0.56
MBD1-227ENST00000592060 SONP18583 2426 aaKnown RBP11.53□□□□□ -0.56
MBD1-227ENST00000592060 LINC01549A6NIU2 74 aa11.53□□□□□ -0.56
MBD1-227ENST00000592060 CCL24O00175 119 aa11.53□□□□□ -0.56
MBD1-227ENST00000592060 TSHBP01222 138 aa11.53□□□□□ -0.56
MBD1-227ENST00000592060 TRPT1Q86TN4 253 aaKnown RBP11.53□□□□□ -0.56
MBD1-227ENST00000592060 KIR2DL4Q99706 377 aa11.53□□□□□ -0.56
MBD1-227ENST00000592060 LINC00467Q9BRT7 94 aa11.53□□□□□ -0.56
MBD1-227ENST00000592060 IGIPA6NJ69 53 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms