RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 LEPROTO15243 131 aa13.05□□□□□ -0.32
SMARCA4-215ENST00000590574 IGHG2P01859 326 aa13.05□□□□□ -0.32
SMARCA4-215ENST00000590574 ZNRF2Q8NHG8 242 aa13.05□□□□□ -0.32
SMARCA4-215ENST00000590574 J3QLI3 93 aa13.04□□□□□ -0.32
SMARCA4-215ENST00000590574 C20orf173Q96LM9 149 aa13.04□□□□□ -0.32
SMARCA4-215ENST00000590574 JPT2Q9H910 190 aa13.04□□□□□ -0.32
SMARCA4-215ENST00000590574 LGALS1P09382 135 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-215ENST00000590574 DEFB136Q30KP8 78 aa13.04□□□□□ -0.32
SMARCA4-215ENST00000590574 IGKV2D-26A0A0A0MRZ7 120 aa13.04□□□□□ -0.32
SMARCA4-215ENST00000590574 GAGE12JA6NER3 117 aa13.04□□□□□ -0.32
SMARCA4-215ENST00000590574 GAGE4Q13068 117 aa13.04□□□□□ -0.32
SMARCA4-215ENST00000590574 GAGE5Q13069 117 aa13.04□□□□□ -0.32
SMARCA4-215ENST00000590574 Q8N1Y9 231 aa13.04□□□□□ -0.32
SMARCA4-215ENST00000590574 SLC25A20O43772 301 aa13.04□□□□□ -0.32
SMARCA4-215ENST00000590574 CFAP161Q6P656 301 aa13.04□□□□□ -0.32
SMARCA4-215ENST00000590574 G3V4G9 280 aa13.03□□□□□ -0.32
SMARCA4-215ENST00000590574 C11orf86A6NJI1 115 aa13.03□□□□□ -0.32
SMARCA4-215ENST00000590574 C11orf71Q6IPW1 123 aa13.03□□□□□ -0.32
SMARCA4-215ENST00000590574 CRPP02741 224 aa13.03□□□□□ -0.32
SMARCA4-215ENST00000590574 VPREB3Q9UKI3 123 aa13.03□□□□□ -0.32
SMARCA4-215ENST00000590574 H3BMM0 161 aa13.02□□□□□ -0.32
SMARCA4-215ENST00000590574 CFHR3Q02985 330 aa13.02□□□□□ -0.32
SMARCA4-215ENST00000590574 UBE2WQ96B02 151 aa13.02□□□□□ -0.32
SMARCA4-215ENST00000590574 CHD9Q3L8U1 2897 aa13.02□□□□□ -0.33
SMARCA4-215ENST00000590574 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-215ENST00000590574 IGKV2-29A2NJV5 120 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-215ENST00000590574 Q8N6K4 173 aa13.02□□□□□ -0.33
SMARCA4-215ENST00000590574 CFC1BP0CG36 223 aa13.02□□□□□ -0.33
SMARCA4-215ENST00000590574 CFC1P0CG37 223 aa13.02□□□□□ -0.33
SMARCA4-215ENST00000590574 CMC4P56277 68 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-215ENST00000590574 A0A0J9YXV3 536 aa13.01□□□□□ -0.33
SMARCA4-215ENST00000590574 GAS8-AS1O95177 125 aa13.01□□□□□ -0.33
SMARCA4-215ENST00000590574 MRPS12O15235 138 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-215ENST00000590574 RAI1Q7Z5J4 1906 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-215ENST00000590574 K7EMT4 169 aa13□□□□□ -0.33
SMARCA4-215ENST00000590574 HTN3P15516 51 aa13□□□□□ -0.33
SMARCA4-215ENST00000590574 MALP21145 153 aa13□□□□□ -0.33
SMARCA4-215ENST00000590574 SLURP1P55000 103 aa13□□□□□ -0.33
SMARCA4-215ENST00000590574 C1QTNF4Q9BXJ3 329 aa13□□□□□ -0.33
SMARCA4-215ENST00000590574 TET2Q6N021 2002 aaPredicted RBP13□□□□□ -0.33
SMARCA4-215ENST00000590574 BDP1A6H8Y1 2624 aa13□□□□□ -0.33
SMARCA4-215ENST00000590574 RBX1P62877 108 aa13□□□□□ -0.33
SMARCA4-215ENST00000590574 NRGNQ92686 78 aa13□□□□□ -0.33
SMARCA4-215ENST00000590574 Q96MF0 132 aa12.99□□□□□ -0.33
SMARCA4-215ENST00000590574 MDFICQ9P1T7 246 aa12.99□□□□□ -0.33
SMARCA4-215ENST00000590574 A6NDX4 124 aa12.99□□□□□ -0.33
SMARCA4-215ENST00000590574 PIEZO2Q9H5I5 2752 aa12.99□□□□□ -0.33
SMARCA4-215ENST00000590574 PAX4O43316 350 aa12.99□□□□□ -0.33
SMARCA4-215ENST00000590574 TIMM17AQ99595 171 aa12.99□□□□□ -0.33
SMARCA4-215ENST00000590574 C11orf21Q9P2W6 132 aa12.99□□□□□ -0.33
SMARCA4-215ENST00000590574 IGHV4OR15-8A0A075B7B6 117 aa12.98□□□□□ -0.33
SMARCA4-215ENST00000590574 A0A087WW49 117 aa12.98□□□□□ -0.33
SMARCA4-215ENST00000590574 GPHB5Q86YW7 130 aa12.98□□□□□ -0.33
SMARCA4-215ENST00000590574 A4D1N5 150 aa12.98□□□□□ -0.33
SMARCA4-215ENST00000590574 MRGPRG-AS1Q2M3A8 158 aa12.98□□□□□ -0.33
SMARCA4-215ENST00000590574 MAPKAPK5-AS1Q8N8E1 139 aa12.98□□□□□ -0.33
SMARCA4-215ENST00000590574 PCSK5Q92824 1860 aa12.98□□□□□ -0.33
SMARCA4-215ENST00000590574 MUSTN1Q8IVN3 82 aa12.98□□□□□ -0.33
SMARCA4-215ENST00000590574 MUC6Q6W4X9 2439 aa12.98□□□□□ -0.33
SMARCA4-215ENST00000590574 APRG1Q8IVJ8 170 aa12.97□□□□□ -0.33
SMARCA4-215ENST00000590574 C19orf84I3L1E1 186 aa12.97□□□□□ -0.33
SMARCA4-215ENST00000590574 OPRPNQ99935 248 aaPredicted RBP12.97□□□□□ -0.33
SMARCA4-215ENST00000590574 NEXN-AS1Q8NBZ9 246 aa12.97□□□□□ -0.33
SMARCA4-215ENST00000590574 CDSNQ15517 529 aa12.96□□□□□ -0.33
SMARCA4-215ENST00000590574 U3KQE9 123 aa12.96□□□□□ -0.33
SMARCA4-215ENST00000590574 TMEM86BQ8N661 226 aa12.96□□□□□ -0.34
SMARCA4-215ENST00000590574 NTN5Q8WTR8 489 aaPredicted RBP12.96□□□□□ -0.34
SMARCA4-215ENST00000590574 TM2D2Q9BX73 214 aa12.95□□□□□ -0.34
SMARCA4-215ENST00000590574 A0A0C4DFX4 3053 aa12.95□□□□□ -0.34
SMARCA4-215ENST00000590574 GAGE7O76087 117 aa12.95□□□□□ -0.34
SMARCA4-215ENST00000590574 GAGE12FP0CL80 117 aa12.95□□□□□ -0.34
SMARCA4-215ENST00000590574 GAGE12GP0CL81 117 aa12.95□□□□□ -0.34
SMARCA4-215ENST00000590574 GAGE12IP0CL82 117 aa12.95□□□□□ -0.34
SMARCA4-215ENST00000590574 DEFB130BP0DP73 79 aa12.95□□□□□ -0.34
SMARCA4-215ENST00000590574 DEFB130AP0DP74 79 aa12.95□□□□□ -0.34
SMARCA4-215ENST00000590574 ZFAND2AQ8N6M9 145 aa12.95□□□□□ -0.34
SMARCA4-215ENST00000590574 C6orf226Q5I0X4 101 aa12.95□□□□□ -0.34
SMARCA4-215ENST00000590574 NRACQ8N912 160 aa12.94□□□□□ -0.34
SMARCA4-215ENST00000590574 ARHGAP32A7KAX9 2087 aa12.94□□□□□ -0.34
SMARCA4-215ENST00000590574 HERVK_113P63121 156 aa12.94□□□□□ -0.34
SMARCA4-215ENST00000590574 A0A0J9YX75 114 aa12.94□□□□□ -0.34
SMARCA4-215ENST00000590574 PRR9Q5T870 116 aa12.94□□□□□ -0.34
SMARCA4-215ENST00000590574 CARD19Q96LW7 228 aa12.94□□□□□ -0.34
SMARCA4-215ENST00000590574 CLPSL1A2RUU4 121 aa12.93□□□□□ -0.34
SMARCA4-215ENST00000590574 SPANXA1Q9NS26 97 aa12.93□□□□□ -0.34
SMARCA4-215ENST00000590574 TMEM243Q9BU79 118 aa12.93□□□□□ -0.34
SMARCA4-215ENST00000590574 Q6ZQT7 251 aa12.92□□□□□ -0.34
SMARCA4-215ENST00000590574 NOTCH3Q9UM47 2321 aa12.92□□□□□ -0.34
SMARCA4-215ENST00000590574 PTPRQQ9UMZ3 2332 aa12.92□□□□□ -0.34
SMARCA4-215ENST00000590574 GAGE6Q13070 117 aa12.91□□□□□ -0.34
SMARCA4-215ENST00000590574 F8W735 103 aaPredicted RBP12.91□□□□□ -0.34
SMARCA4-215ENST00000590574 FOXI1Q12951 378 aa12.91□□□□□ -0.34
SMARCA4-215ENST00000590574 Q9H8V8 135 aa12.91□□□□□ -0.34
SMARCA4-215ENST00000590574 PRSS47A8MTI9 375 aa12.9□□□□□ -0.34
SMARCA4-215ENST00000590574 GAGE2AQ6NT46 116 aa12.9□□□□□ -0.34
SMARCA4-215ENST00000590574 CNFNQ9BYD5 112 aa12.9□□□□□ -0.34
SMARCA4-215ENST00000590574 NDUFA11Q86Y39 141 aa12.9□□□□□ -0.34
SMARCA4-215ENST00000590574 C20orf203Q8NBC4 194 aa12.9□□□□□ -0.34
SMARCA4-215ENST00000590574 PIFOQ8TCI5 191 aa12.9□□□□□ -0.34
SMARCA4-215ENST00000590574 RANBP2P49792 3224 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms