RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 RHEBQ15382 184 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 MUC21Q5SSG8 566 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 KCNIP4Q6PIL6 250 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 FAM231DQ6ZW35 169 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 SMIM15Q7Z3B0 74 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 COX8CQ7Z4L0 72 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 OR10G8Q8NGN5 311 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 OCC1Q8TAD7 63 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 TMEM263Q8WUH6 116 aaKnown RBP4.14□□□□□ -1.75
VPS25-204ENST00000589577 ANAPC16Q96DE5 110 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 SFRP2Q96HF1 295 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 FAM19A4Q96LR4 140 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 MLST8Q9BVC4 326 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 RPP21Q9H633 154 aaKnown RBP4.14□□□□□ -1.75
VPS25-204ENST00000589577 OSTCQ9NRP0 149 aa4.14□□□□□ -1.75
VPS25-204ENST00000589577 TRBV20OR9-2A0A075B6H5 130 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 TMSB15BA0A087X1C1 80 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 PGPEP1LA6NFU8 196 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 C9JQL5 133 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 F5H768 121 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 S100A8P05109 93 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 CXCL1P09341 107 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 S100A1P23297 94 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 ESRGQ1W209 222 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 TDRG1Q3Y452 100 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 ANXA2RQ3ZCQ2 193 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 LINC01559Q495D7 138 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 CT83Q5H943 113 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 SPANXN1Q5VSR9 72 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 Q6ZSA8 131 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 C1orf158Q8N1D5 194 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 FER1L6-AS1Q8NA97 138 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 ISOC2Q96AB3 205 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 BTF3L4Q96K17 158 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 LINC00467Q9BRT7 94 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 SPXQ9BT56 116 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 TPPP3Q9BW30 176 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 CTDSP1Q9GZU7 261 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 CARHSP1Q9Y2V2 147 aaKnown RBP4.13□□□□□ -1.75
VPS25-204ENST00000589577 MRPS16Q9Y3D3 137 aaKnown RBP4.13□□□□□ -1.75
VPS25-204ENST00000589577 PHLDA3Q9Y5J5 127 aa4.13□□□□□ -1.75
VPS25-204ENST00000589577 TIMM8BQ9Y5J9 83 aaPredicted RBP4.13□□□□□ -1.75
VPS25-204ENST00000589577 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
VPS25-204ENST00000589577 FAM231BA6NCW3 169 aa4.12□□□□□ -1.75
VPS25-204ENST00000589577 F2Z2F3 143 aa4.12□□□□□ -1.75
VPS25-204ENST00000589577 CRXO43186 299 aaPredicted RBP4.12□□□□□ -1.75
VPS25-204ENST00000589577 ZNF324O75467 553 aaPredicted RBP4.12□□□□□ -1.75
VPS25-204ENST00000589577 PRM2P04554 102 aa4.12□□□□□ -1.75
VPS25-204ENST00000589577 SMIM17P0DL12 118 aa4.12□□□□□ -1.75
VPS25-204ENST00000589577 SMCPP49901 116 aaPredicted RBP4.12□□□□□ -1.75
VPS25-204ENST00000589577 PRR9Q5T870 116 aa4.12□□□□□ -1.75
VPS25-204ENST00000589577 LELP1Q5T871 98 aa4.12□□□□□ -1.75
VPS25-204ENST00000589577 SLC7A5P1Q8MH63 180 aa4.12□□□□□ -1.75
VPS25-204ENST00000589577 ZFP82Q8N141 532 aa4.12□□□□□ -1.75
VPS25-204ENST00000589577 NUDT10Q8NFP7 164 aa4.12□□□□□ -1.75
VPS25-204ENST00000589577 NUDT11Q96G61 164 aa4.12□□□□□ -1.75
VPS25-204ENST00000589577 RNASE7Q9H1E1 156 aaKnown RBP4.12□□□□□ -1.75
VPS25-204ENST00000589577 RPS10P5Q9NQ39 176 aa4.12□□□□□ -1.75
VPS25-204ENST00000589577 NAT8BQ9UHF3 227 aa4.12□□□□□ -1.75
VPS25-204ENST00000589577 TRGV2A0A075B6R0 118 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 A0A087WWC5 75 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 PLAC8L1A1L4L8 177 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 GRIFINA4D1Z8 144 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 C19orf71A6NCJ1 209 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 LYRM9A8MSI8 78 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 H3BVH4 76 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 K7EN84 100 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 IGLV2-8P01709 118 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 TYMSP04818 313 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 TRGC1P0CF51 173 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 DEFB130BP0DP73 79 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 DEFB130AP0DP74 79 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 ZNF80P51504 273 aaPredicted RBP4.11□□□□□ -1.75
VPS25-204ENST00000589577 HNRNPA3P51991 378 aaKnown RBP4.11□□□□□ -1.75
VPS25-204ENST00000589577 TCL1AP56279 114 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 CACNG7P62955 275 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 KIR3DS1Q14943 382 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 CLRN3Q8NCR9 226 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 TSKUQ8WUA8 353 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 GFRA4Q9GZZ7 299 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 GSN-AS1Q9NRJ2 163 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 IL36BQ9NZH7 164 aa4.11□□□□□ -1.75
VPS25-204ENST00000589577 IGLV5-52A0A0A0MRZ9 124 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 TRGV1A0A0A0MS02 117 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 A0A1B0GUT8 65 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 A0A1B0GW15 77 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 C7orf77A4D0Y5 90 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 HIGD1CA8MV81 97 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 M0R2P5 195 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 M0R381 172 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 CIDEAO60543 219 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 ATP5G1P05496 136 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 OR5AL1P0C617 328 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 ARMS2P0C7Q2 107 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 ADCYAP1P18509 176 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 RIGQ13278 110 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 ZNF876PQ49A33 203 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 C10orf91Q5T1B1 145 aa4.1□□□□□ -1.75
VPS25-204ENST00000589577 RNASE8Q8TDE3 154 aaKnown RBP4.1□□□□□ -1.75
VPS25-204ENST00000589577 AP1S3Q96PC3 154 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms