RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 RPL35AP18077 110 aaKnown RBP12.89□□□□□ -0.35
DNMT1-215ENST00000588913 IFI27P40305 119 aaPredicted RBP12.89□□□□□ -0.35
DNMT1-215ENST00000588913 CDKN1BP46527 198 aa12.89□□□□□ -0.35
DNMT1-215ENST00000588913 M0R3E3 92 aa12.89□□□□□ -0.35
DNMT1-215ENST00000588913 SOCS3O14543 225 aa12.89□□□□□ -0.35
DNMT1-215ENST00000588913 NHLRC4P0CG21 123 aaPredicted RBP12.89□□□□□ -0.35
DNMT1-215ENST00000588913 CKS2P33552 79 aa12.89□□□□□ -0.35
DNMT1-215ENST00000588913 C8orf49Q96NF6 230 aa12.89□□□□□ -0.35
DNMT1-215ENST00000588913 KNCNA6PVL3 124 aa12.88□□□□□ -0.35
DNMT1-215ENST00000588913 FABP5P3A8MUU1 101 aa12.88□□□□□ -0.35
DNMT1-215ENST00000588913 IGLC6P0CF74 106 aa12.88□□□□□ -0.35
DNMT1-215ENST00000588913 MRPL51Q4U2R6 128 aaKnown RBP12.88□□□□□ -0.35
DNMT1-215ENST00000588913 TMEM97Q5BJF2 176 aa12.88□□□□□ -0.35
DNMT1-215ENST00000588913 SLC50A1Q9BRV3 221 aa12.88□□□□□ -0.35
DNMT1-215ENST00000588913 NXT2Q9NPJ8 142 aaKnown RBP12.88□□□□□ -0.35
DNMT1-215ENST00000588913 MUC21A0A0G2JKD1 596 aa12.87□□□□□ -0.35
DNMT1-215ENST00000588913 MUC21A0A140T8X8 626 aa12.87□□□□□ -0.35
DNMT1-215ENST00000588913 MUC21Q5SSG8 566 aa12.87□□□□□ -0.35
DNMT1-215ENST00000588913 MAP1LC3AQ9H492 121 aa12.87□□□□□ -0.35
DNMT1-215ENST00000588913 TWIST1Q15672 202 aa12.86□□□□□ -0.35
DNMT1-215ENST00000588913 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.86□□□□□ -0.35
DNMT1-215ENST00000588913 BOD1L2Q8IYS8 172 aa12.86□□□□□ -0.35
DNMT1-215ENST00000588913 H0Y8G0 127 aa12.86□□□□□ -0.35
DNMT1-215ENST00000588913 PRB4P10163 310 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-215ENST00000588913 HSD52Q0P140 79 aa12.86□□□□□ -0.35
DNMT1-215ENST00000588913 IGFL4Q6B9Z1 124 aa12.86□□□□□ -0.35
DNMT1-215ENST00000588913 AMN1Q8IY45 258 aa12.86□□□□□ -0.35
DNMT1-215ENST00000588913 OR8A1Q8NGG7 326 aa12.86□□□□□ -0.35
DNMT1-215ENST00000588913 IFI27L1Q96BM0 104 aa12.86□□□□□ -0.35
DNMT1-215ENST00000588913 MRPL53Q96EL3 112 aaKnown RBP12.86□□□□□ -0.35
DNMT1-215ENST00000588913 C20orf173Q96LM9 149 aa12.86□□□□□ -0.35
DNMT1-215ENST00000588913 GTF2H5Q6ZYL4 71 aa12.85□□□□□ -0.35
DNMT1-215ENST00000588913 AP1S3Q96PC3 154 aa12.85□□□□□ -0.35
DNMT1-215ENST00000588913 A0A096LNJ9 63 aa12.84□□□□□ -0.35
DNMT1-215ENST00000588913 H3BRM9 83 aa12.84□□□□□ -0.35
DNMT1-215ENST00000588913 C2orf91Q6ZV80 131 aa12.84□□□□□ -0.35
DNMT1-215ENST00000588913 CSMD3Q7Z407 3707 aa12.84□□□□□ -0.35
DNMT1-215ENST00000588913 TRAV8-2A0A0B4J237 113 aa12.84□□□□□ -0.35
DNMT1-215ENST00000588913 RBX1P62877 108 aa12.84□□□□□ -0.35
DNMT1-215ENST00000588913 TIMM8BQ9Y5J9 83 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-215ENST00000588913 IGKV2-40A0A087WW87 121 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-215ENST00000588913 IGKV2D-40P01614 121 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-215ENST00000588913 GIG44P09565 113 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-215ENST00000588913 FGF6P10767 208 aa12.83□□□□□ -0.36
DNMT1-215ENST00000588913 SMIM15Q7Z3B0 74 aa12.83□□□□□ -0.36
DNMT1-215ENST00000588913 SPATA25Q9BR10 227 aa12.83□□□□□ -0.36
DNMT1-215ENST00000588913 OVOL2Q9BRP0 275 aa12.83□□□□□ -0.36
DNMT1-215ENST00000588913 LOC389332A0A1B0GUA5 103 aa12.82□□□□□ -0.36
DNMT1-215ENST00000588913 C7orf71A4D174 169 aa12.82□□□□□ -0.36
DNMT1-215ENST00000588913 HLA-DMBP28068 263 aa12.82□□□□□ -0.36
DNMT1-215ENST00000588913 PCP4P48539 62 aa12.82□□□□□ -0.36
DNMT1-215ENST00000588913 TMSB15BA0A087X1C1 80 aa12.81□□□□□ -0.36
DNMT1-215ENST00000588913 F6UB75 175 aa12.81□□□□□ -0.36
DNMT1-215ENST00000588913 FCER1GP30273 86 aa12.81□□□□□ -0.36
DNMT1-215ENST00000588913 DEFB135Q30KP9 77 aa12.81□□□□□ -0.36
DNMT1-215ENST00000588913 TRPT1Q86TN4 253 aaKnown RBP12.81□□□□□ -0.36
DNMT1-215ENST00000588913 RNASE8Q8TDE3 154 aaKnown RBP12.81□□□□□ -0.36
DNMT1-215ENST00000588913 ZMAT4Q9H898 229 aa12.81□□□□□ -0.36
DNMT1-215ENST00000588913 STARD9Q9P2P6 4700 aa12.81□□□□□ -0.36
DNMT1-215ENST00000588913 ATP5LO75964 103 aa12.81□□□□□ -0.36
DNMT1-215ENST00000588913 NCR2O95944 276 aa12.81□□□□□ -0.36
DNMT1-215ENST00000588913 ORM1P02763 201 aa12.81□□□□□ -0.36
DNMT1-215ENST00000588913 CMC4P56277 68 aaPredicted RBP12.81□□□□□ -0.36
DNMT1-215ENST00000588913 CACNG7P62955 275 aa12.81□□□□□ -0.36
DNMT1-215ENST00000588913 RNF182Q8N6D2 247 aa12.81□□□□□ -0.36
DNMT1-215ENST00000588913 PRSS47A8MTI9 375 aa12.8□□□□□ -0.36
DNMT1-215ENST00000588913 K7ERU9 68 aa12.8□□□□□ -0.36
DNMT1-215ENST00000588913 HLA-DRB4P13762 266 aa12.8□□□□□ -0.36
DNMT1-215ENST00000588913 AMMECR1LQ6DCA0 310 aa12.8□□□□□ -0.36
DNMT1-215ENST00000588913 Q6ZVH6 145 aa12.8□□□□□ -0.36
DNMT1-215ENST00000588913 HIGD1BQ9P298 99 aa12.8□□□□□ -0.36
DNMT1-215ENST00000588913 HLA-DRB4X5D2U9 266 aa12.8□□□□□ -0.36
DNMT1-215ENST00000588913 C9orf118A6NHY6 69 aa12.79□□□□□ -0.36
DNMT1-215ENST00000588913 CBY3A6NI87 242 aa12.79□□□□□ -0.36
DNMT1-215ENST00000588913 NPYP01303 97 aa12.79□□□□□ -0.36
DNMT1-215ENST00000588913 VGLL1Q99990 258 aa12.79□□□□□ -0.36
DNMT1-215ENST00000588913 EDA2RQ9HAV5 297 aa12.79□□□□□ -0.36
DNMT1-215ENST00000588913 ANKRD39Q53RE8 183 aa12.79□□□□□ -0.36
DNMT1-215ENST00000588913 CST9LQ9H4G1 147 aa12.79□□□□□ -0.36
DNMT1-215ENST00000588913 GAGE10A6NGK3 116 aa12.78□□□□□ -0.36
DNMT1-215ENST00000588913 STHQ8IWL8 128 aa12.78□□□□□ -0.36
DNMT1-215ENST00000588913 KIR2DL5BQ8NHK3 375 aa12.78□□□□□ -0.36
DNMT1-215ENST00000588913 RNF185Q96GF1 192 aa12.78□□□□□ -0.36
DNMT1-215ENST00000588913 C16orf92Q96LL3 132 aa12.78□□□□□ -0.36
DNMT1-215ENST00000588913 CSTL1Q9H114 145 aa12.78□□□□□ -0.36
DNMT1-215ENST00000588913 LENEPQ9Y5L5 61 aa12.78□□□□□ -0.36
DNMT1-215ENST00000588913 H3BMM0 161 aa12.77□□□□□ -0.36
DNMT1-215ENST00000588913 APOC4P55056 127 aa12.77□□□□□ -0.36
DNMT1-215ENST00000588913 SNRPD3P62318 126 aaKnown RBP12.77□□□□□ -0.36
DNMT1-215ENST00000588913 Q8N8P6 123 aa12.77□□□□□ -0.36
DNMT1-215ENST00000588913 TNFRSF6BO95407 300 aa12.76□□□□□ -0.37
DNMT1-215ENST00000588913 ZNF80P51504 273 aaPredicted RBP12.76□□□□□ -0.37
DNMT1-215ENST00000588913 OCIAD2Q56VL3 154 aa12.76□□□□□ -0.37
DNMT1-215ENST00000588913 WWC2-AS2Q96NR7 200 aa12.76□□□□□ -0.37
DNMT1-215ENST00000588913 IGHV4-4A0A075B6R2 117 aa12.76□□□□□ -0.37
DNMT1-215ENST00000588913 GAGE12BA1L429 117 aa12.76□□□□□ -0.37
DNMT1-215ENST00000588913 IGKV3-20P01619 116 aa12.76□□□□□ -0.37
DNMT1-215ENST00000588913 EVI2AP22794 236 aa12.76□□□□□ -0.37
DNMT1-215ENST00000588913 KIR3DS1Q14943 382 aa12.76□□□□□ -0.37
DNMT1-215ENST00000588913 TMEM78Q5T7P6 136 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms