RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 KLLNB2CW77 178 aa10.59□□□□□ -0.71
NEDD4L-223ENST00000588516 DUSP14O95147 198 aaKnown RBP10.59□□□□□ -0.71
NEDD4L-223ENST00000588516 SNRPD3P62318 126 aaKnown RBP10.59□□□□□ -0.71
NEDD4L-223ENST00000588516 LINC01356Q8N9X3 169 aa10.59□□□□□ -0.71
NEDD4L-223ENST00000588516 CST9LQ9H4G1 147 aa10.59□□□□□ -0.71
NEDD4L-223ENST00000588516 MRPL35Q9NZE8 188 aaKnown RBP10.59□□□□□ -0.71
NEDD4L-223ENST00000588516 CHTOPQ9Y3Y2 248 aaKnown RBP10.59□□□□□ -0.71
NEDD4L-223ENST00000588516 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.59□□□□□ -0.71
NEDD4L-223ENST00000588516 OR11H12B2RN74 326 aa10.58□□□□□ -0.71
NEDD4L-223ENST00000588516 RNF223E7ERA6 249 aa10.58□□□□□ -0.71
NEDD4L-223ENST00000588516 GAS8-AS1O95177 125 aa10.58□□□□□ -0.71
NEDD4L-223ENST00000588516 IGHV3-11P01762 117 aa10.58□□□□□ -0.71
NEDD4L-223ENST00000588516 PRR9Q5T870 116 aa10.58□□□□□ -0.71
NEDD4L-223ENST00000588516 OR11H1Q8NG94 326 aa10.58□□□□□ -0.71
NEDD4L-223ENST00000588516 OR11H2Q8NH07 326 aa10.58□□□□□ -0.71
NEDD4L-223ENST00000588516 TMEM141Q96I45 108 aa10.58□□□□□ -0.71
NEDD4L-223ENST00000588516 TP73-AS1Q9UF72 201 aa10.58□□□□□ -0.71
NEDD4L-223ENST00000588516 CUBNO60494 3623 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 TRBV25-1A0A075B6N4 114 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 IGHV4-30-2A0A087WSY4 118 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 A0A1W2PPM0 123 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 H3BUT2 72 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 VCYO14598 125 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 TRBV12-3P01733 135 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 MGPP08493 103 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 GCSHP23434 173 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 HERVK_113P61574 105 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 OCIAD2Q56VL3 154 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 GTSCR1Q86UQ5 136 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 CEND1Q8N111 149 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 C14orf178Q8N769 122 aaPredicted RBP10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 RASL10AQ92737 203 aa10.58□□□□□ -0.72
NEDD4L-223ENST00000588516 TRAV26-2A0A0B4J265 109 aa10.57□□□□□ -0.72
NEDD4L-223ENST00000588516 SAMD5Q5TGI4 173 aa10.57□□□□□ -0.72
NEDD4L-223ENST00000588516 UFSP1Q6NVU6 142 aa10.57□□□□□ -0.72
NEDD4L-223ENST00000588516 KIR2DL4Q99706 377 aa10.57□□□□□ -0.72
NEDD4L-223ENST00000588516 KLK15Q9H2R5 256 aa10.57□□□□□ -0.72
NEDD4L-223ENST00000588516 CYSLTR1Q9Y271 337 aa10.57□□□□□ -0.72
NEDD4L-223ENST00000588516 LGALS9O00182 355 aa10.56□□□□□ -0.72
NEDD4L-223ENST00000588516 ELANEP08246 267 aa10.56□□□□□ -0.72
NEDD4L-223ENST00000588516 PSMB8P28062 276 aa10.56□□□□□ -0.72
NEDD4L-223ENST00000588516 RBX1P62877 108 aa10.56□□□□□ -0.72
NEDD4L-223ENST00000588516 BLCAPP62952 87 aa10.56□□□□□ -0.72
NEDD4L-223ENST00000588516 C2orf66Q6UXQ4 117 aa10.56□□□□□ -0.72
NEDD4L-223ENST00000588516 NEXN-AS1Q8NBZ9 246 aa10.56□□□□□ -0.72
NEDD4L-223ENST00000588516 RNASE8Q8TDE3 154 aaKnown RBP10.56□□□□□ -0.72
NEDD4L-223ENST00000588516 TMEM238LA0A1B0GVL6 79 aa10.55□□□□□ -0.72
NEDD4L-223ENST00000588516 A6NJY4 79 aa10.55□□□□□ -0.72
NEDD4L-223ENST00000588516 J3KRW8 73 aa10.55□□□□□ -0.72
NEDD4L-223ENST00000588516 RNASE3P12724 160 aaKnown RBP10.55□□□□□ -0.72
NEDD4L-223ENST00000588516 CSTL1Q9H114 145 aa10.55□□□□□ -0.72
NEDD4L-223ENST00000588516 SPCS1Q9Y6A9 102 aa10.55□□□□□ -0.72
NEDD4L-223ENST00000588516 ANK2Q01484 3957 aa10.54□□□□□ -0.72
NEDD4L-223ENST00000588516 IGKV2D-26A0A0A0MRZ7 120 aa10.54□□□□□ -0.72
NEDD4L-223ENST00000588516 TRBV6-5A0A0K0K1A5 114 aa10.54□□□□□ -0.72
NEDD4L-223ENST00000588516 MYMXA0A1B0GTQ4 84 aa10.54□□□□□ -0.72
NEDD4L-223ENST00000588516 DCANP1Q8TF63 244 aa10.54□□□□□ -0.72
NEDD4L-223ENST00000588516 HIST1H4GQ99525 98 aa10.54□□□□□ -0.72
NEDD4L-223ENST00000588516 E9PLD3 99 aa10.53□□□□□ -0.72
NEDD4L-223ENST00000588516 GNRH2O43555 120 aa10.53□□□□□ -0.72
NEDD4L-223ENST00000588516 SCGB2A2Q13296 93 aa10.53□□□□□ -0.72
NEDD4L-223ENST00000588516 RNF152Q8N8N0 203 aa10.53□□□□□ -0.72
NEDD4L-223ENST00000588516 TIMM17AQ99595 171 aa10.53□□□□□ -0.72
NEDD4L-223ENST00000588516 TRGV11A0A075B6L2 103 aa10.52□□□□□ -0.73
NEDD4L-223ENST00000588516 RHOHQ15669 191 aa10.52□□□□□ -0.73
NEDD4L-223ENST00000588516 RAB37Q96AX2 223 aa10.52□□□□□ -0.73
NEDD4L-223ENST00000588516 VPS25Q9BRG1 176 aa10.52□□□□□ -0.73
NEDD4L-223ENST00000588516 KIF25-AS1Q9Y6Z4 181 aa10.52□□□□□ -0.73
NEDD4L-223ENST00000588516 A0A0J9YX75 114 aa10.51□□□□□ -0.73
NEDD4L-223ENST00000588516 K7EQG2 157 aa10.51□□□□□ -0.73
NEDD4L-223ENST00000588516 LGALS1P09382 135 aaKnown RBP10.51□□□□□ -0.73
NEDD4L-223ENST00000588516 CD7P09564 240 aa10.51□□□□□ -0.73
NEDD4L-223ENST00000588516 PMVKQ15126 192 aa10.51□□□□□ -0.73
NEDD4L-223ENST00000588516 BAALCQ8WXS3 180 aa10.51□□□□□ -0.73
NEDD4L-223ENST00000588516 TRAV2A0A0B4J234 112 aa10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 PRSS29PA6NIE9 313 aa10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 F5H697 171 aa10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 F6UB75 175 aa10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 PCP4P48539 62 aa10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 POLR2KP53803 58 aaKnown RBP10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 TCTAP57738 103 aa10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 RNF151Q2KHN1 245 aa10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 FOXI2Q6ZQN5 318 aa10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 TRPT1Q86TN4 253 aaKnown RBP10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 TEX29Q8N6K0 151 aa10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 RPL39LQ96EH5 51 aaKnown RBP10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 UBE2E2Q96LR5 201 aa10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 C9orf85Q96MD7 179 aa10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 JMJD8Q96S16 334 aa10.5□□□□□ -0.73
NEDD4L-223ENST00000588516 IGKV3-7A0A075B6H7 116 aa10.49□□□□□ -0.73
NEDD4L-223ENST00000588516 IGHV1OR15-1A0A075B7D0 117 aa10.49□□□□□ -0.73
NEDD4L-223ENST00000588516 TRBV27A0A0K0K1C4 114 aa10.49□□□□□ -0.73
NEDD4L-223ENST00000588516 FXYD2P54710 66 aa10.49□□□□□ -0.73
NEDD4L-223ENST00000588516 DEFB112Q30KQ8 113 aa10.49□□□□□ -0.73
NEDD4L-223ENST00000588516 LYRM7Q5U5X0 104 aa10.49□□□□□ -0.73
NEDD4L-223ENST00000588516 Q6ZQT7 251 aa10.49□□□□□ -0.73
NEDD4L-223ENST00000588516 NHP2Q9NX24 153 aaKnown RBP10.49□□□□□ -0.73
NEDD4L-223ENST00000588516 VPREB3Q9UKI3 123 aa10.49□□□□□ -0.73
NEDD4L-223ENST00000588516 CR1P17927 2039 aa10.49□□□□□ -0.73
NEDD4L-223ENST00000588516 IGHV3-16A0A0C4DH30 117 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms