RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 MAP1LC3B2A6NCE7 125 aa11.22□□□□□ -0.61
TMED1-203ENST00000588259 KRBOX1C9JBD0 128 aa11.22□□□□□ -0.61
TMED1-203ENST00000588259 M0R381 172 aa11.22□□□□□ -0.61
TMED1-203ENST00000588259 TPT1P13693 172 aaKnown RBP11.22□□□□□ -0.61
TMED1-203ENST00000588259 BAALCQ8WXS3 180 aa11.22□□□□□ -0.61
TMED1-203ENST00000588259 RMI2Q96E14 147 aa11.22□□□□□ -0.61
TMED1-203ENST00000588259 MAP1LC3BQ9GZQ8 125 aa11.22□□□□□ -0.61
TMED1-203ENST00000588259 IGKV2D-24A0A075B6R9 120 aa11.21□□□□□ -0.61
TMED1-203ENST00000588259 J3QL48 77 aa11.21□□□□□ -0.61
TMED1-203ENST00000588259 CST9LP1Q5W188 147 aa11.21□□□□□ -0.61
TMED1-203ENST00000588259 UFSP1Q6NVU6 142 aa11.21□□□□□ -0.61
TMED1-203ENST00000588259 FMC1Q96HJ9 113 aa11.21□□□□□ -0.61
TMED1-203ENST00000588259 VPS13BQ7Z7G8 4022 aa11.21□□□□□ -0.62
TMED1-203ENST00000588259 C1QBP02746 253 aa11.2□□□□□ -0.62
TMED1-203ENST00000588259 SEC11BP0C7V7 166 aa11.2□□□□□ -0.62
TMED1-203ENST00000588259 CRIP1P50238 77 aa11.2□□□□□ -0.62
TMED1-203ENST00000588259 KCNIP4Q6PIL6 250 aa11.2□□□□□ -0.62
TMED1-203ENST00000588259 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
TMED1-203ENST00000588259 ZFP30Q9Y2G7 519 aa11.2□□□□□ -0.62
TMED1-203ENST00000588259 COX11Q9Y6N1 276 aa11.2□□□□□ -0.62
TMED1-203ENST00000588259 A0A087WX48 190 aa11.19□□□□□ -0.62
TMED1-203ENST00000588259 RBFOX3A6NFN3 312 aa11.19□□□□□ -0.62
TMED1-203ENST00000588259 PLA2G1BP04054 148 aaKnown RBP11.19□□□□□ -0.62
TMED1-203ENST00000588259 LINC01620Q4KN68 170 aa11.19□□□□□ -0.62
TMED1-203ENST00000588259 LINC00528Q8N1L1 170 aa11.19□□□□□ -0.62
TMED1-203ENST00000588259 ARPC5O15511 151 aa11.18□□□□□ -0.62
TMED1-203ENST00000588259 AKR1C3P42330 323 aa11.18□□□□□ -0.62
TMED1-203ENST00000588259 NIT1Q86X76 327 aa11.18□□□□□ -0.62
TMED1-203ENST00000588259 ZFP82Q8N141 532 aa11.18□□□□□ -0.62
TMED1-203ENST00000588259 STOML3Q8TAV4 291 aa11.18□□□□□ -0.62
TMED1-203ENST00000588259 UBE2WQ96B02 151 aa11.18□□□□□ -0.62
TMED1-203ENST00000588259 SFRP2Q96HF1 295 aa11.18□□□□□ -0.62
TMED1-203ENST00000588259 DNAJC30Q96LL9 226 aa11.18□□□□□ -0.62
TMED1-203ENST00000588259 MYCBP2O75592 4640 aa11.18□□□□□ -0.62
TMED1-203ENST00000588259 RPL36AP83881 106 aaKnown RBP11.17□□□□□ -0.62
TMED1-203ENST00000588259 DNLZQ5SXM8 178 aa11.17□□□□□ -0.62
TMED1-203ENST00000588259 RPL36ALQ969Q0 106 aaKnown RBP11.17□□□□□ -0.62
TMED1-203ENST00000588259 LINC01559Q495D7 138 aa11.16□□□□□ -0.62
TMED1-203ENST00000588259 Q6ZSA8 131 aa11.16□□□□□ -0.62
TMED1-203ENST00000588259 Q8N976 141 aa11.16□□□□□ -0.62
TMED1-203ENST00000588259 TMEM262E9PQX1 116 aa11.15□□□□□ -0.62
TMED1-203ENST00000588259 LTAP01374 205 aa11.15□□□□□ -0.62
TMED1-203ENST00000588259 ELOBQ15370 118 aa11.15□□□□□ -0.62
TMED1-203ENST00000588259 ZNF56Q15929 161 aa11.15□□□□□ -0.62
TMED1-203ENST00000588259 ZNF674Q2M3X9 581 aa11.15□□□□□ -0.62
TMED1-203ENST00000588259 TCEAL7Q9BRU2 100 aa11.15□□□□□ -0.62
TMED1-203ENST00000588259 TRBV10-1A0A0K0K1A3 114 aa11.14□□□□□ -0.63
TMED1-203ENST00000588259 A0A1B0GV50 99 aa11.14□□□□□ -0.63
TMED1-203ENST00000588259 FHITP49789 147 aa11.14□□□□□ -0.63
TMED1-203ENST00000588259 COX8CQ7Z4L0 72 aa11.14□□□□□ -0.63
TMED1-203ENST00000588259 TRBV7-3A0A075B6L6 115 aa11.13□□□□□ -0.63
TMED1-203ENST00000588259 PAGE4O60829 102 aa11.13□□□□□ -0.63
TMED1-203ENST00000588259 SCXQ7RTU7 201 aa11.13□□□□□ -0.63
TMED1-203ENST00000588259 TRBV6-1A0A0K0K1D8 114 aa11.12□□□□□ -0.63
TMED1-203ENST00000588259 CRPP02741 224 aa11.12□□□□□ -0.63
TMED1-203ENST00000588259 UBE2D3P61077 147 aa11.12□□□□□ -0.63
TMED1-203ENST00000588259 UBE2D2P62837 147 aa11.12□□□□□ -0.63
TMED1-203ENST00000588259 RPL19P84098 196 aaKnown RBP11.12□□□□□ -0.63
TMED1-203ENST00000588259 FAM213BQ8TBF2 198 aa11.12□□□□□ -0.63
TMED1-203ENST00000588259 CHCHD7Q9BUK0 85 aa11.12□□□□□ -0.63
TMED1-203ENST00000588259 C1orf43Q9BWL3 253 aa11.12□□□□□ -0.63
TMED1-203ENST00000588259 CYTL1Q9NRR1 136 aa11.12□□□□□ -0.63
TMED1-203ENST00000588259 G3V3Q6 166 aa11.11□□□□□ -0.63
TMED1-203ENST00000588259 SMLR1H3BR10 107 aa11.11□□□□□ -0.63
TMED1-203ENST00000588259 PFDN1O60925 122 aa11.11□□□□□ -0.63
TMED1-203ENST00000588259 SSTP61278 116 aa11.11□□□□□ -0.63
TMED1-203ENST00000588259 C15orf54Q8N8G6 183 aa11.11□□□□□ -0.63
TMED1-203ENST00000588259 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.11□□□□□ -0.63
TMED1-203ENST00000588259 OR10AG1Q8NH19 301 aa11.11□□□□□ -0.63
TMED1-203ENST00000588259 SFT2D1Q8WV19 159 aa11.11□□□□□ -0.63
TMED1-203ENST00000588259 ZNF471Q9BX82 626 aaPredicted RBP11.11□□□□□ -0.63
TMED1-203ENST00000588259 MUC21A0A0G2JKD1 596 aa11.1□□□□□ -0.63
TMED1-203ENST00000588259 MUC21A0A140T8X8 626 aa11.1□□□□□ -0.63
TMED1-203ENST00000588259 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
TMED1-203ENST00000588259 F5H697 171 aa11.1□□□□□ -0.63
TMED1-203ENST00000588259 RAB4BP61018 213 aa11.1□□□□□ -0.63
TMED1-203ENST00000588259 Q0VG73 95 aa11.1□□□□□ -0.63
TMED1-203ENST00000588259 PRR27Q6MZM9 219 aa11.1□□□□□ -0.63
TMED1-203ENST00000588259 CHCHD5Q9BSY4 110 aa11.1□□□□□ -0.63
TMED1-203ENST00000588259 TRBV6-8A0A0A6YYG3 113 aa11.09□□□□□ -0.63
TMED1-203ENST00000588259 ANGP03950 147 aaKnown RBP11.09□□□□□ -0.63
TMED1-203ENST00000588259 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
TMED1-203ENST00000588259 SPANXN1Q5VSR9 72 aa11.09□□□□□ -0.63
TMED1-203ENST00000588259 DEFB104AQ8WTQ1 72 aa11.09□□□□□ -0.63
TMED1-203ENST00000588259 CHAC1Q9BUX1 264 aa11.09□□□□□ -0.63
TMED1-203ENST00000588259 HLA-DQA1P01909 254 aa11.08□□□□□ -0.64
TMED1-203ENST00000588259 S100A9P06702 114 aaKnown RBP11.08□□□□□ -0.64
TMED1-203ENST00000588259 RGS21Q2M5E4 152 aa11.08□□□□□ -0.64
TMED1-203ENST00000588259 MPV17L2Q567V2 206 aa11.08□□□□□ -0.64
TMED1-203ENST00000588259 BAGE2Q86Y30 109 aa11.08□□□□□ -0.64
TMED1-203ENST00000588259 NEXN-AS1Q8NBZ9 246 aa11.08□□□□□ -0.64
TMED1-203ENST00000588259 ATRAIDQ6UW56 229 aa11.07□□□□□ -0.64
TMED1-203ENST00000588259 OR10G8Q8NGN5 311 aa11.07□□□□□ -0.64
TMED1-203ENST00000588259 UMAD1C9J7I0 102 aa11.06□□□□□ -0.64
TMED1-203ENST00000588259 SMIM17P0DL12 118 aa11.06□□□□□ -0.64
TMED1-203ENST00000588259 DNAH8Q96JB1 4490 aa11.05□□□□□ -0.64
TMED1-203ENST00000588259 CXCL1P09341 107 aa11.05□□□□□ -0.64
TMED1-203ENST00000588259 PKIAP61925 76 aa11.05□□□□□ -0.64
TMED1-203ENST00000588259 CLPSL2Q6UWE3 100 aa11.05□□□□□ -0.64
TMED1-203ENST00000588259 ENHOQ6UWT2 76 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms