RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 TRAV1-1A0A0B4J248 108 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 CRPP02741 224 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 GTF2A1P52655 376 aaPredicted RBP2.26□□□□□ -2.05
TUBD1-208ENST00000588009 ARPP19P56211 112 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 KRTAP12-3P60328 96 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 CKS1BP61024 79 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 PSG9Q00887 426 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 EIF3IQ13347 325 aaKnown RBP2.26□□□□□ -2.05
TUBD1-208ENST00000588009 SPANXN5Q5MJ07 72 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 PHF5AQ7RTV0 110 aaKnown RBP2.26□□□□□ -2.05
TUBD1-208ENST00000588009 LINC00471Q8N535 108 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 OR2T10Q8NGZ9 312 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 PPTC7Q8NI37 304 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 ISOC1Q96CN7 298 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 SLC50A1Q9BRV3 221 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 TMEM138Q9NPI0 162 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 KIAA1549LQ6ZVL6 1849 aa2.26□□□□□ -2.05
TUBD1-208ENST00000588009 ANAPC1Q9H1A4 1944 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 K7ERJ3 54 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 M0QZK8 103 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 NDUFB3O43676 98 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 TMBIM6P55061 237 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 DYNLT1P63172 113 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 DEFB113Q30KQ7 82 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 BRMS1LQ5PSV4 323 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 Q5XG85 94 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 TMEM229BQ8NBD8 167 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 ZNF625Q96I27 306 aaPredicted RBP2.25□□□□□ -2.05
TUBD1-208ENST00000588009 PRADC1Q9BSG0 188 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 POPDC3Q9HBV1 291 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 CRCT1Q9UGL9 99 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 NAT8BQ9UHF3 227 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 FLG2Q5D862 2391 aaPredicted RBP2.25□□□□□ -2.05
TUBD1-208ENST00000588009 PLCE1Q9P212 2302 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 UNC13CQ8NB66 2214 aa2.25□□□□□ -2.05
TUBD1-208ENST00000588009 MYO5AQ9Y4I1 1855 aaKnown RBP2.24□□□□□ -2.05
TUBD1-208ENST00000588009 DYNC2H1Q8NCM8 4307 aaKnown RBP2.24□□□□□ -2.05
TUBD1-208ENST00000588009 TRGV10A0A0A0MS01 117 aa2.24□□□□□ -2.05
TUBD1-208ENST00000588009 F8W036 122 aa2.24□□□□□ -2.05
TUBD1-208ENST00000588009 SMIM21Q3B7S5 101 aa2.24□□□□□ -2.05
TUBD1-208ENST00000588009 CCDC153Q494R4 210 aa2.24□□□□□ -2.05
TUBD1-208ENST00000588009 PATE2Q6UY27 113 aa2.24□□□□□ -2.05
TUBD1-208ENST00000588009 FP248Q71RG6 208 aaPredicted RBP2.24□□□□□ -2.05
TUBD1-208ENST00000588009 LZICQ8WZA0 190 aa2.24□□□□□ -2.05
TUBD1-208ENST00000588009 TAF9BQ9HBM6 251 aa2.24□□□□□ -2.05
TUBD1-208ENST00000588009 FREM1Q5H8C1 2179 aa2.24□□□□□ -2.05
TUBD1-208ENST00000588009 SACSQ9NZJ4 4579 aa2.24□□□□□ -2.05
TUBD1-208ENST00000588009 NDUFA2O43678 99 aa2.23□□□□□ -2.05
TUBD1-208ENST00000588009 BAALC-AS2P0C853 105 aa2.23□□□□□ -2.05
TUBD1-208ENST00000588009 ZNF705BP0CI00 300 aaPredicted RBP2.23□□□□□ -2.05
TUBD1-208ENST00000588009 MGST1P10620 155 aaKnown RBP2.23□□□□□ -2.05
TUBD1-208ENST00000588009 MIFP14174 115 aa2.23□□□□□ -2.05
TUBD1-208ENST00000588009 SDC4P31431 198 aa2.23□□□□□ -2.05
TUBD1-208ENST00000588009 SLC30A7Q8NEW0 376 aa2.23□□□□□ -2.05
TUBD1-208ENST00000588009 OR8J3Q8NGG0 315 aa2.23□□□□□ -2.05
TUBD1-208ENST00000588009 Q96M85 177 aa2.23□□□□□ -2.05
TUBD1-208ENST00000588009 ADAT1Q9BUB4 502 aaKnown RBP2.23□□□□□ -2.05
TUBD1-208ENST00000588009 NPCDR1Q9BY65 106 aa2.23□□□□□ -2.05
TUBD1-208ENST00000588009 OR2H1Q9GZK4 316 aa2.23□□□□□ -2.05
TUBD1-208ENST00000588009 BCL2L10Q9HD36 194 aa2.23□□□□□ -2.05
TUBD1-208ENST00000588009 TRGV2A0A075B6R0 118 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 BORCS7-ASMTA0A0B4J1R7 106 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 TRAV3A0A0B4J244 114 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 A0A1B0GW64 132 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 TMEM189A5PLL7 270 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 LYZL6O75951 148 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 CST7O76096 145 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 ASAH2BP0C7U1 165 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 HBBP68871 147 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 CROCCP2Q86T23 111 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 Q8IYB0 196 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 LRRC18Q8N456 261 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 ZNF418Q8TF45 676 aaPredicted RBP2.22□□□□□ -2.05
TUBD1-208ENST00000588009 HEATR5BQ9P2D3 2071 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 ANK3Q12955 4377 aaKnown RBP2.22□□□□□ -2.05
TUBD1-208ENST00000588009 DNAH1Q9P2D7 4330 aa2.22□□□□□ -2.05
TUBD1-208ENST00000588009 FSIP2Q5CZC0 6907 aa2.21□□□□□ -2.06
TUBD1-208ENST00000588009 HRNRQ86YZ3 2850 aaPredicted RBP2.21□□□□□ -2.06
TUBD1-208ENST00000588009 TRAV5A0A0B4J249 113 aa2.21□□□□□ -2.06
TUBD1-208ENST00000588009 LOC107984640A0A0U1RRK4 108 aa2.21□□□□□ -2.06
TUBD1-208ENST00000588009 C9JAW5 83 aa2.21□□□□□ -2.06
TUBD1-208ENST00000588009 CR1P17927 2039 aa2.21□□□□□ -2.06
TUBD1-208ENST00000588009 ESRGQ1W209 222 aa2.21□□□□□ -2.06
TUBD1-208ENST00000588009 MORN2Q502X0 79 aa2.21□□□□□ -2.06
TUBD1-208ENST00000588009 RNASE10Q5GAN6 216 aaKnown RBP2.21□□□□□ -2.06
TUBD1-208ENST00000588009 CACYBPQ9HB71 228 aaKnown RBP2.21□□□□□ -2.06
TUBD1-208ENST00000588009 SPANXCQ9NY87 97 aa2.21□□□□□ -2.06
TUBD1-208ENST00000588009 HIGD1AQ9Y241 93 aa2.21□□□□□ -2.06
TUBD1-208ENST00000588009 CSMD3Q7Z407 3707 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 WNK2Q9Y3S1 2297 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 IGHV1-58A0A0C4DH39 117 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 TRBV7-6A0A0J9YX20 115 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 TRBV6-5A0A0K0K1A5 114 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 SCTP09683 121 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 FABP2P12104 132 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 SDC2P34741 201 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 RPL35P42766 123 aaKnown RBP2.2□□□□□ -2.06
TUBD1-208ENST00000588009 SSR2P43308 183 aa2.2□□□□□ -2.06
TUBD1-208ENST00000588009 SRP9P49458 86 aaKnown RBP2.2□□□□□ -2.06
TUBD1-208ENST00000588009 RPS19BP1Q86WX3 136 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms